Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0135
         (741 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70...    31   0.80 
At1g06820.1 68414.m00727 carotenoid isomerase, putative similar ...    29   4.3  
At5g37920.1 68418.m04568 hypothetical protein contains Pfam PF04...    27   9.9  
At5g27280.1 68418.m03256 zinc finger (DNL type) family protein c...    27   9.9  

>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
           putative similar to heat shock protein hsp70 GI:1771478
           from [Pisum sativum]
          Length = 646

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 329 YKLEDVQLDLKTEHIRQNXPEXFEVRTLRNDEELGATVTTE----IEYAYNYTVSWGHGH 496
           YK ED Q+  K E         + +R    DE+L   +T E    IE A + T+ W  G+
Sbjct: 530 YKAEDEQVKKKVEAKNSLENYAYNMRNTIKDEKLAQKLTQEDKQKIEKAIDETIEWIEGN 589

Query: 497 GIAIV 511
            +A V
Sbjct: 590 QLAEV 594


>At1g06820.1 68414.m00727 carotenoid isomerase, putative similar to
           carotenoid isomerase from Lycopersicon esculentum
           [gi:19550437]; contains Pfam profile: PF02032 Phytoene
           dehydrogenase related enzyme
          Length = 595

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 481 LGPRARHSYCLNTTIEMADGDVLPPIQW-ANPFTVRRTRLHKLEKYLEPG 627
           L P  RH   + TT  + D + LPP ++ A    V    + +LEK L PG
Sbjct: 440 LAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKEDVAARIIQRLEKKLFPG 489


>At5g37920.1 68418.m04568 hypothetical protein contains Pfam PF04510
           : Family of unknown function (DUF577)); common family
           comprised of  At5g37410, At5g37400, At5g37920,
           At5g37460, At5g37650, At5g37470, At5g37420, At5g37430 
           contains Pfam PF04510 : Family of unknown function
           (DUF577)
          Length = 609

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 6   QLKPDYSSCAVSGSKSYSIFEVLENIEN 89
           QL+P + SC      SYS+F+VL  + N
Sbjct: 381 QLQPLFMSCLKEQGVSYSMFQVLGQVVN 408


>At5g27280.1 68418.m03256 zinc finger (DNL type) family protein
           contains Pfam profile PF05180: DNL zinc finger
          Length = 212

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 323 VSYKLEDVQLDLKTEHIRQNXPEXFEVRTLRNDEELGATVT 445
           +S K ED   D   +H   N    F  RTL NDE +G  ++
Sbjct: 40  LSNKKEDKDYD--PQHSESNSSSLFRNRTLSNDEAMGLVLS 78


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,900,482
Number of Sequences: 28952
Number of extensions: 287446
Number of successful extensions: 583
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)