Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0109
(498 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36) 62 3e-10
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 53 2e-07
SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22) 52 3e-07
SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22) 52 3e-07
SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 52 3e-07
SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_3985| Best HMM Match : C2 (HMM E-Value=0) 49 2e-06
SB_19229| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33) 46 1e-05
SB_27807| Best HMM Match : C2 (HMM E-Value=0) 46 2e-05
SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_40281| Best HMM Match : C2 (HMM E-Value=6.7e-39) 46 2e-05
SB_794| Best HMM Match : C2 (HMM E-Value=1e-23) 42 2e-04
SB_29967| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_3618| Best HMM Match : C2 (HMM E-Value=4.8e-23) 42 4e-04
SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_50691| Best HMM Match : C2 (HMM E-Value=2.8e-17) 41 7e-04
SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018) 40 9e-04
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11279| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 38 0.003
SB_40174| Best HMM Match : Copine (HMM E-Value=5.5e-20) 38 0.006
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_1629| Best HMM Match : C2 (HMM E-Value=7.3e-17) 38 0.006
SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30) 37 0.008
SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40) 36 0.019
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 36 0.025
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.057
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 33 0.099
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_28583| Best HMM Match : C2 (HMM E-Value=2.7e-17) 31 0.40
SB_34190| Best HMM Match : MAM (HMM E-Value=0) 31 0.53
SB_58025| Best HMM Match : C2 (HMM E-Value=0.0016) 31 0.53
SB_17935| Best HMM Match : C2 (HMM E-Value=6.1e-07) 31 0.70
SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13) 30 0.92
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_23139| Best HMM Match : Flotillin (HMM E-Value=0.11) 28 3.7
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_18049| Best HMM Match : C2 (HMM E-Value=3.2) 28 4.9
SB_48082| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_15237| Best HMM Match : NHL (HMM E-Value=0) 27 8.6
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 27 8.6
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 27 8.6
SB_7181| Best HMM Match : C2 (HMM E-Value=1.2e-15) 27 8.6
>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
Length = 454
Score = 61.7 bits (143), Expect = 3e-10
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLM--SNSSHRYNTSVKSGTLNPVWEEHFSLPM 432
++ VEV EA +L+P DPNGLSDP+V + L+ +++ + T + +L+PV+ E F +
Sbjct: 112 IMRVEVREARNLMPMDPNGLSDPYVKVKLLPDPDNTSKKKTKIFKESLSPVFNETFEFKI 171
Query: 433 SGTVNEDSLCLEVWDFD 483
+ L +EVWD+D
Sbjct: 172 QNKDKDRRLSIEVWDWD 188
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGT 441
+ V V+ +LV D G SDPFVT + ++ + V TLNPVW E S+ +S
Sbjct: 609 IQVSVLRGRNLVAMDITGKSDPFVTFRV--GDQEKFRSRVHQKTLNPVWME--SVALSLP 664
Query: 442 VNEDSLCLEVWDFD 483
++D L L+VWD D
Sbjct: 665 ADDDKLYLDVWDKD 678
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +1
Query: 292 LVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEV 471
++P D NGLSDP+ +Y +N + T V TL+PVW P++ + +L V
Sbjct: 486 MIPMDKNGLSDPYCVVY--ANRNLVKKTEVAKETLDPVWNAMVEFPVA-NFTQVTLSFAV 542
Query: 472 WDFDPA 489
+D D A
Sbjct: 543 FDKDDA 548
>SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 344
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 RASGL-MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 420
R SG+ L V +VE DL DP+G+SDP+ + S S + T V TLNP W
Sbjct: 262 RTSGIGKLVVTIVEGVDLKSSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTM 318
Query: 421 SLPMSGTVNEDSLCLEVWDFD 483
+ + + +D LC+ V+D D
Sbjct: 319 TFTVK-DMEQDVLCITVFDRD 338
>SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 87
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 RASGL-MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 420
R SG+ L V +VE DL DP+G+SDP+ + S S + T V TLNP W
Sbjct: 5 RTSGIGKLVVTIVEGVDLKSSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTM 61
Query: 421 SLPMSGTVNEDSLCLEVWDFD 483
+ + + +D LC+ V+D D
Sbjct: 62 TFTVK-DMEQDVLCITVFDRD 81
>SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 RASGL-MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 420
R SG+ L V +VE DL DP+G+SDP+ + S S + T V TLNP W
Sbjct: 218 RTSGIGKLVVTIVEGVDLKSSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTM 274
Query: 421 SLPMSGTVNEDSLCLEVWDFD 483
+ + + +D LC+ V+D D
Sbjct: 275 TFTVK-DMEQDVLCITVFDRD 294
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 RASGL-MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 420
R SG+ L V +VE DL DP+G+SDP+ + S S + T V TLNP W
Sbjct: 927 RTSGIGKLVVTIVEGVDLKSSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTM 983
Query: 421 SLPMSGTVNEDSLCLEVWDFD 483
+ + + +D LC+ V+D D
Sbjct: 984 TFTVK-DMEQDVLCITVFDRD 1003
>SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 RASGL-MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 420
R SG+ L V +VE DL DP+G+SDP+ + S S + T V TLNP W
Sbjct: 262 RTSGIGKLVVTIVEGVDLKSSDPSGMSDPYCEV---SMGSQEHKTRVCPQTLNPKWNSTM 318
Query: 421 SLPMSGTVNEDSLCLEVWDFD 483
+ + + +D LC+ V+D D
Sbjct: 319 TFTVK-DMEQDVLCITVFDRD 338
>SB_3985| Best HMM Match : C2 (HMM E-Value=0)
Length = 835
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKD----PNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSL 426
+L V+VVEA DLV KD G SDP+ + + + ++ T VK LNP W E F
Sbjct: 364 VLRVKVVEARDLVAKDFGVVKKGKSDPYAILEI---GAQKFRTKVKKNDLNPTWNETFEA 420
Query: 427 PMSGTVNEDSLCLEVWDFDPA 489
+ + +D + + +WD D A
Sbjct: 421 FVDNSEGQD-IDMFLWDEDKA 440
Score = 30.3 bits (65), Expect = 0.92
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLM---SNSSHRYNTSVK---SGTLNPVWEEHFS 423
L V+V+ A +L D ++PFV +YL+ S + R +V+ SG N V+E
Sbjct: 726 LVVKVISARNLRSGDAENKTNPFVRLYLLPDRSKKTRRVTKTVRGAYSGMFNEVFEYAIG 785
Query: 424 LPMSG 438
L + G
Sbjct: 786 LDLLG 790
>SB_19229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 47.2 bits (107), Expect = 8e-06
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSS--HRYNTSVKSGTLNPVWEEHFSLPMS 435
L + +VEA L D G SDP+V I L+ + T+VK TLNP + E F+ ++
Sbjct: 218 LQITIVEAKSLKSMDLTGYSDPYVKIALVQEGRKIKKKKTTVKKRTLNPYYNETFTFTVA 277
Query: 436 -GTVNEDSLCLEVWDFD 483
+ + SL + V D+D
Sbjct: 278 FEKIEQTSLIISVLDYD 294
>SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33)
Length = 567
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLM--SNSSHRYNTSVKSGTLNPVWEEH--FSLP 429
L+V ++EA +L KD +G+SDPF I L+ R+ T++ TLNP W+ + +
Sbjct: 430 LHVHIMEAKNLPGKDADGMSDPFCKITLLPDKKGKTRHKTAIIKRTLNPSWDYNLIYEEL 489
Query: 430 MSGTVNEDSLCLEVWDFDPA 489
+ + L + +WD D A
Sbjct: 490 SQEELRQRVLEISIWDHDIA 509
>SB_27807| Best HMM Match : C2 (HMM E-Value=0)
Length = 405
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +1
Query: 310 NGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFS---LPMSGTVNEDSLCLEVWDF 480
+G SDPFV I L+ + H+ T VK LNPVW E F+ P + + + +L ++V D+
Sbjct: 157 SGTSDPFVKIMLLPDKKHKLETRVKRKNLNPVWNEVFTFEGFPHNKLMGK-TLYMQVLDY 215
Query: 481 D 483
D
Sbjct: 216 D 216
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 268 VEVVEATDLVPKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEH--FSLPMS 435
V V++A L D G SDP+V +Y+M + T++K T +PVW E F +P+
Sbjct: 275 VVVMKANKLKAMDLTGSSDPYVKMYIMHKDRRLDKKKTTIKRRTRDPVWNESFIFDVPLD 334
Query: 436 GTVNEDSLCLEVWDFD 483
+ + + V D+D
Sbjct: 335 -KIRDLTFVFNVMDYD 349
>SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGT 441
L++E+ E DL +D G SDP+V ++ Y + S LNP W E F +P+
Sbjct: 133 LDIELKEGKDLAARDKTGTSDPYVKF--KADGRQIYKSRTISKNLNPQWNEKFCVPIEDI 190
Query: 442 VNEDSLCLEVWDFD 483
+ L+V+DFD
Sbjct: 191 T--VPMVLKVFDFD 202
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM 432
++++ +VE ++P D +G SDP+ L + +Y + TLNP W E F L M
Sbjct: 275 IVSIILVEGKKMIPMDDSGFSDPYCRFRL---GNEKYKSKACKETLNPQWSEQFDLKM 329
Score = 34.7 bits (76), Expect = 0.043
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGT 441
L V++ A L D G SDPF I + ++ R T+ TLNP W + + +P+
Sbjct: 470 LQVKLHRAVGLASADLGGASDPFAVIEV---NNQRLVTNTIYKTLNPNWNKIYEMPVWDI 526
Query: 442 VNEDSLCLEVWDFD 483
D L + V+D D
Sbjct: 527 --HDVLDITVFDED 538
>SB_40281| Best HMM Match : C2 (HMM E-Value=6.7e-39)
Length = 230
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEHFSLP-- 429
L V + EA +L KD NG SDPFV YL+ + + T LNP W F+
Sbjct: 95 LQVVIKEARNLPAKDANGFSDPFVKAYLLPDKGRKSKRKTPTIRKNLNPQWNFPFTYDDV 154
Query: 430 MSGTVNEDSLCLEVWDFD 483
+ + SL L VWD+D
Sbjct: 155 TLEELMDRSLELTVWDWD 172
>SB_794| Best HMM Match : C2 (HMM E-Value=1e-23)
Length = 583
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSG 438
+L + VVE +L DPNG SDP+ +++ T+V+ T+NP W E ++G
Sbjct: 50 LLTITVVEGRNLPVMDPNGKSDPYC---IVAVGDQEQRTAVQYNTINPEWRETLQFEVAG 106
>SB_29967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF--SLPM 432
ML V V+ A+DL + G SDP+V + + + T V LNPVW E F L
Sbjct: 1 MLRVVVISASDLPNVETVGKSDPYVVVGFLGSKK---KTEVIKDELNPVWNEKFEWDLQK 57
Query: 433 SGTVNEDSLCLEVWDFD 483
++SL ++V D++
Sbjct: 58 RALSPDESLHIQVKDWE 74
>SB_3618| Best HMM Match : C2 (HMM E-Value=4.8e-23)
Length = 486
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +1
Query: 262 LNVEVVEATDLVPKD-PNGLSDPFVTIYLMSN--SSHRYNTSVKSGTLNPVWE--EHFSL 426
L V+V++ +L P+D P+G +DP+V + + + +S +++ GTLNP W E +
Sbjct: 27 LMVKVLQGRNLSPRDLPSGTADPYVLVAIQPDWGNSGTLKSTIIQGTLNPTWPFGEIYRF 86
Query: 427 PMS-GTVNEDSLCLEVWDFDP 486
+S + E L + ++D DP
Sbjct: 87 NLSPEQLKETKLSVHLYDNDP 107
>SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 41.1 bits (92), Expect = 5e-04
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLM--SNSSHRYNTSVKSGTLNPVWEEHFSLPMS 435
L+V + +A L P D G SDP+V ++L+ ++ S++ + K TLNPV+ E +L
Sbjct: 18 LDVVLHDAKGLKPMDHGGTSDPYVKLHLLPGASKSNKLRSHTKYKTLNPVFNE--TLTYY 75
Query: 436 GTVNED----SLCLEVWDFD 483
G E+ +L L+V+D D
Sbjct: 76 GITEEEISSKTLRLQVFDED 95
>SB_50691| Best HMM Match : C2 (HMM E-Value=2.8e-17)
Length = 430
Score = 40.7 bits (91), Expect = 7e-04
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 250 SGLMLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLP 429
SG++L V + + L+ D +G SDP+ I SN TSV GT+NPVW+ +
Sbjct: 289 SGVLL-VALHSGSKLLSMDADGYSDPYCII--TSNREKVKTTSVVEGTVNPVWDSITEI- 344
Query: 430 MSGTVNEDSLCLEVWDFD 483
+ +N+ +L V+D D
Sbjct: 345 LVKDINKTNLHFFVYDRD 362
>SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018)
Length = 482
Score = 40.3 bits (90), Expect = 9e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPV 405
+L V+V+ A DLVP+D NG SDP+V + L+ + + + S + N +
Sbjct: 407 LLLVKVIRARDLVPRDLNGKSDPYVVLELVPDRNSDFLASTPNSNSNSI 455
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVW 408
++ V ++ A DL P+DP GL+DP+V + L K TLNP++
Sbjct: 1722 VVRVYILSAIDLQPQDPGGLADPYVVVQLGKKKLDN-KDQYKPNTLNPIF 1770
>SB_11279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +1
Query: 289 DLVPKDPNGLSDPFVTIYLM--SNSSHRYNTSVKSGTLNPVWEEHF 420
DL+P D +GL+DP++ Y++ + S+R T + TL+P ++E F
Sbjct: 2 DLMPCDSDGLADPYMRSYVLPDKSKSNRRRTDIAKNTLSPSFDEKF 47
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 277 VEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDS 456
++A L K+ G P+ I N R TS+ T NP W E+F+L ++ E
Sbjct: 2 IKAMGLTSKEHGGNISPYCIIST-GNPHQRKRTSLLKDTHNPFWNEYFALDINSKTRE-- 58
Query: 457 LCLEVWDFD 483
L ++++D++
Sbjct: 59 LTIDIYDYE 67
>SB_40174| Best HMM Match : Copine (HMM E-Value=5.5e-20)
Length = 723
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +1
Query: 301 KDPNGLSDPFVTIYLMSNSSHR---YNTSVKSGTLNPVWEEHFSLPMSGTVNED---SLC 462
KD G SDPF+ Y + + + T V TLNP W+ FS+P N D S+
Sbjct: 84 KDFFGKSDPFLVFYRCNEDNSFTAVHRTEVVKNTLNPTWKP-FSVPARALCNGDIDRSIR 142
Query: 463 LEVWDFD 483
+E +D+D
Sbjct: 143 IECYDWD 149
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS- 435
ML V V A +L D G SDP+V + S T V LNPVW+E S
Sbjct: 1 MLRVVVKSAVNLPNVDFRGESDPYVKL---SFRGEEKKTKVIDDNLNPVWDEDNEFEWSL 57
Query: 436 --GTVN-EDSLCLEVWDFD 483
GT++ +D+L + V D+D
Sbjct: 58 GGGTLSLDDTLKVSVKDWD 76
>SB_1629| Best HMM Match : C2 (HMM E-Value=7.3e-17)
Length = 327
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 VVEATDLVPKD-PNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNE 450
+++ DL KD S P+V IY + + H + T++ + LNP + E F + +
Sbjct: 158 ILQCRDLPAKDLRRNTSSPYVRIYALPSRRHNHRTNIVTNNLNPTFNELFIISGLTLMEV 217
Query: 451 DSLCLEV 471
L L++
Sbjct: 218 QQLALQI 224
>SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30)
Length = 1142
Score = 37.1 bits (82), Expect = 0.008
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF---SLPM 432
L + +A DL+ DP+G+SDP+ + + SS T + TL P W++ + +
Sbjct: 346 LRAYLFQARDLLASDPDGVSDPYARVVFGTRSS---VTETLARTLCPTWDQTLIFDEVNI 402
Query: 433 SGTV-----NEDSLCLEVWDFDPAE 492
G++ N ++ +E++D DP +
Sbjct: 403 YGSIEQVAENPPAVIIELYDKDPVD 427
>SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)
Length = 2057
Score = 35.9 bits (79), Expect = 0.019
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEH--FSLPMS 435
L V+++ AT L PK N ++ P+V + L+ + + ++ + NP + E FS+P +
Sbjct: 279 LQVKLIRATRLTPKGNNVVATPYVKMCLLPDRKRKLQSTRRHRNSNPAFNEDFVFSVP-A 337
Query: 436 GTVNEDSLCLEVWDFD 483
+ +L V DFD
Sbjct: 338 EELRMRTLKFTVCDFD 353
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 35.5 bits (78), Expect = 0.025
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEH--FSLP 429
L V V+ A DL ++ + DP+V +YL+ + S + T + + NP + E +S
Sbjct: 803 LRVMVMHAKDLSSRNSSTAGDPYVKLYLLPDPSKTTKLKTKIAKKSQNPTYNETLVYSNL 862
Query: 430 MSGTVNEDSLCLEVWDFD 483
+ + L + VWD D
Sbjct: 863 SAADLKTRHLQVTVWDHD 880
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 34.3 bits (75), Expect = 0.057
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKDPNGLS--DPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLP- 429
+L V +++A +L P D +PF + L + H+ + V+ T NP ++E F
Sbjct: 385 VLTVRLIKAINLSPLDGEWSKPCNPFAIVQLQPDYQHQLQSYVQRKTTNPNFDETFEFEV 444
Query: 430 MSGTVNEDSLCLEVWDFD 483
+ + SLC+ + FD
Sbjct: 445 LVQELQRLSLCITLHSFD 462
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 33.5 bits (73), Expect = 0.099
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 319 SDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGTVNEDSLCLEVWDFDPA 489
SDP+ + + + +Y T K +PVW+E F + T ++ C +V+D D A
Sbjct: 300 SDPYCIVEV---GAQKYRTKTKKSNCDPVWKETFEAFIDNTEGQELFC-KVYDEDIA 352
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEE 414
L + ++ A L + P ++PFV +YL+ + + R T G+L P + E
Sbjct: 635 LLINIIRAERLRSRYPENKTNPFVRLYLLPDRTKKTRRRTGAVRGSLAPSFNE 687
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 LMLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMS 435
+++ V VV+A +L P D NG +DP++ + L R + S LNP + F
Sbjct: 1350 VLVRVYVVKALNLHPSDVNGKADPYLVVNL-GKHRVRDRDNYVSKQLNPTFGRCFE--FE 1406
Query: 436 GTVNEDS-LCLEVWDFD 483
+ DS L + ++D+D
Sbjct: 1407 AIIPMDSMLTVGIYDWD 1423
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 250 SGLMLNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEE 414
SGLM NV+ ++ L +P+V + + HR T+VK T P W E
Sbjct: 390 SGLMANVKKAFTGEV-----RDLVNPYVEVQF---AGHRARTTVKKNTYEPKWNE 436
>SB_28583| Best HMM Match : C2 (HMM E-Value=2.7e-17)
Length = 539
Score = 31.5 bits (68), Expect = 0.40
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPMSGT 441
L V ++ P+D +G D VTI L+ + ++R T++ + +P++ E F + T
Sbjct: 151 LTVHLICGRGFPPRDFSGSLDTCVTIALLPDRTNRKQTAIHRRSTSPLYNETFVFRI--T 208
Query: 442 VNED 453
+ED
Sbjct: 209 ADED 212
>SB_34190| Best HMM Match : MAM (HMM E-Value=0)
Length = 384
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 246 SLASALVRSCVCLSLPILNASCTYDSIACCPTSQPTSHPP 127
+LASA VR C C P A CT+D C ++ T P
Sbjct: 150 TLASADVRRCFCRYAPPHTADCTFDENWCHWSNDNTGSSP 189
>SB_58025| Best HMM Match : C2 (HMM E-Value=0.0016)
Length = 103
Score = 31.1 bits (67), Expect = 0.53
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 331 VTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM-SGTVNEDSLCLEVWDFD 483
V Y+ + + T V G+ NPV+ EHF M + SL EV+ D
Sbjct: 6 VLYYVQNKLVDKKKTKVAKGSTNPVFNEHFVFEMKEEELKNSSLLCEVYQSD 57
>SB_17935| Best HMM Match : C2 (HMM E-Value=6.1e-07)
Length = 129
Score = 30.7 bits (66), Expect = 0.70
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 319 SDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEHF 420
+DPFV + LM + + TSV GTL PV+ E F
Sbjct: 23 TDPFVKVSLMVSGRQIKKTKTSVMHGTLRPVYNEAF 58
>SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13)
Length = 186
Score = 30.3 bits (65), Expect = 0.92
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDPFVTIYLMSNSSH---RYNTSVKSGTLNPVWEEHFSLPM 432
L + V +A DL P G + + L+++S R T+VK+ TLNPV+ E +
Sbjct: 29 LTIVVFKARDLKPLT-EGYPAVYAEVVLVNSSRRIRKRKATTVKNSTLNPVYNEAMAFDA 87
Query: 433 SGTVNED 453
+ ED
Sbjct: 88 ANMKLED 94
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 152 VGQHAMLSYVQEAFKIGNDKHTQLLTKAEAKEPPG 256
+G+ AM Y+ + K+ DK + KAE K PG
Sbjct: 474 IGEKAMTPYIDKLDKLKADKVKEFADKAEIKAKPG 508
>SB_30502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 319 SDPFVTIYLMSNSSH--RYNTSVKSGTLNPVWEEHFSLPMSG-TVNEDSLCLEV 471
+DP++ + L + + NT VK TLNP++ E F+ ++ ++ ++ L V
Sbjct: 144 TDPYIKLSLYCDGVRLSKANTRVKRRTLNPIYNEKFNFNVTADQISHTTVALRV 197
>SB_23139| Best HMM Match : Flotillin (HMM E-Value=0.11)
Length = 1166
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 186 SCTYDSIACCPTSQPTSHPPTL 121
S ++ + CCP Q TSH P L
Sbjct: 1064 SMLHEDLNCCPVPQDTSHEPQL 1085
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 262 LNVEVVEATDLVPKDPNGLSDP--FVTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLP-- 429
L++ V+ + + D L P V + ++ H T S TLNPV+ E F +P
Sbjct: 1901 LHITVINVSGIPTSDETFLRPPNCSVKMRILPEMLHWQWTRKVSRTLNPVFNETFIVPGF 1960
Query: 430 MSGTVNEDSLCLEVWDFD 483
+ + E + V DFD
Sbjct: 1961 VHNKLRECTAHFVVLDFD 1978
>SB_18049| Best HMM Match : C2 (HMM E-Value=3.2)
Length = 52
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 331 VTIYLMSNSSHRYNTSVKSGTLNPVWEEHFSLPM 432
V Y+ + + T V G+ NPV+ EHF M
Sbjct: 6 VLYYVQNKLVDKKKTKVAKGSTNPVFNEHFVFEM 39
>SB_48082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = +1
Query: 259 MLNVEVVEATDLVPKD----PNGLSDPFVTI 339
+L +EV EA DLV KD G SDP+ +
Sbjct: 317 VLRIEVTEAKDLVAKDIAVFKKGTSDPYAMV 347
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 186 SCTYDS-IACCPTSQPTSHPPTLC 118
+CT D + CC S P + PT+C
Sbjct: 1806 TCTPDCPVMCCKNSSPATECPTIC 1829
>SB_15237| Best HMM Match : NHL (HMM E-Value=0)
Length = 997
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 490 LLDRSPTLLSKGNLHSQCQTW--VKKNVLPKQDLEFPTSPMCCTG 362
+++ + LL KG+ CQ VK N+ + LEF +SP+ G
Sbjct: 532 VIEYAENLLEKGSTLEICQLAEEVKANLQQQSSLEFVSSPLATKG 576
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 125 VGGC-DVGCEVGQHAMLSYVQEAFKIGNDKHTQLLTKAEA 241
+G C DVGC++ Q + E K G+D T +L K E+
Sbjct: 436 MGKCGDVGCQITQMKRKKNMIEMGKCGDDMGTIVLGKVES 475
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 201 PILNASCTYDSIACCP 154
P+ NASC D + CCP
Sbjct: 848 PLPNASCCSDGLHCCP 863
>SB_7181| Best HMM Match : C2 (HMM E-Value=1.2e-15)
Length = 630
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 322 DPFVTIYLMSNSSHRYNTSVKSGTLNPVWEEHF 420
DP+V I++ + + + T V NP W E F
Sbjct: 353 DPYVKIHIPTAPNGKAQTKVMDDNPNPEWHETF 385
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,948,495
Number of Sequences: 59808
Number of extensions: 313143
Number of successful extensions: 926
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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