Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0101
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.5
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 29 2.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 29 2.6
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 28 4.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 6.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 27 6.0
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 27 6.0
Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 27 7.9
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 27 7.9
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 27 7.9
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 27 7.9
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -3
Query: 423 TATSVSATSPLCTLGTTHRAPAD-----IIDRAPLPPNRVSNETM 304
T+T++ T P T+ TH+ P++ + RAPL P + + T+
Sbjct: 434 TSTTLMVTQPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTL 478
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -3
Query: 423 TATSVSATSPLCTLGTTHRAPAD-----IIDRAPLPPNRVSNETM 304
T+T++ T P T+ TH+ P++ + RAPL P + + T+
Sbjct: 434 TSTTLMVTQPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTL 478
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -3
Query: 423 TATSVSATSPLCTLGTTHRAPAD-----IIDRAPLPPNRVSNETM 304
T+T++ T P T+ TH+ P++ + RAPL P + + T+
Sbjct: 434 TSTTLMVTQPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTL 478
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -3
Query: 423 TATSVSATSPLCTLGTTHRAPAD-----IIDRAPLPPNRVSNETM 304
T+T++ T P T+ TH+ P++ + RAPL P + + T+
Sbjct: 434 TSTTLMVTQPTVTVSPTHQVPSEPFVGFTVTRAPLRPLDIGSTTL 478
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -3
Query: 405 ATSPLCTLGTTHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSREXISHLSTPLMSPYNA 226
+ P+ T ++ + A +I P +++E V+ Q + + I+HL+TP SP +
Sbjct: 1136 SADPIATPISSSISTATVIPIVAATPTNITSEP---VIVQPITAQVITHLATP--SPVSH 1190
Query: 225 RLESSSTGSA 196
L S+S+ SA
Sbjct: 1191 SLSSNSSPSA 1200
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -3
Query: 405 ATSPLCTLGTTHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSREXISHLSTPLMSPYNA 226
+ P+ T ++ + A +I P +++E V+ Q + + I+HL+TP SP +
Sbjct: 1136 SADPIATPISSSISTATVIPIVAATPTNITSEP---VIVQPITAQVITHLATP--SPVSH 1190
Query: 225 RLESSSTGSA 196
L S+S+ SA
Sbjct: 1191 SLSSNSSPSA 1200
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/92 (27%), Positives = 35/92 (38%)
Frame = -3
Query: 429 F*TATSVSATSPLCTLGTTHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSREXISHLST 250
F T+VS SP T+ T P + PP + T V S ++L+T
Sbjct: 469 FYPVTTVSTMSPPTTV-TVPTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTT 527
Query: 249 PLMSPYNARLESSSTGSAFPADSPKPVPLAVV 154
P +P N SS+T P + P V
Sbjct: 528 PTTAPVNP--TSSTTAPTAPVNPTSPTTAPTV 557
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 375 THRAPADIIDRAPLPPNRVSNETMKVVVFQRRSREXISHLSTPL 244
T + DIID +P N +S++ + +++ R E ++H+ PL
Sbjct: 289 TRKTSTDIIDGFNVPSNMISDDNLPALIY--RVIETLNHMIFPL 330
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 493 TDVPPQSNSPP-GSVLEPDHAGVLNGDERFRHVTTLHAWNDTPCAR 359
T +P N P S +E + + ERFR TL NDT AR
Sbjct: 42 TPIPVLINDTPVASEIEQVEKELAHSSERFRKPKTLSVTNDTESAR 87
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 423 TATSVSATSPLCTLGTTHRAPADIIDRAPLPPNRVSNET 307
T+ + TSP T+GT+ APA++ P N S+ T
Sbjct: 623 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 661
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 423 TATSVSATSPLCTLGTTHRAPADIIDRAPLPPNRVSNET 307
T+ + TSP T+GT+ APA++ P N S+ T
Sbjct: 679 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 717
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -3
Query: 402 TSPLCTLGTTHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSREXISHLSTPLMSPYNAR 223
T+P T H + + D+ PN++ + +VV+ R + + + Y
Sbjct: 1093 TTPGATSNDLHHLVSVMCDKRLFVPNKLMGRLLPIVVYGMRCKIMPTRIRHAATVAYGKM 1152
Query: 222 LESSSTGSAFPADS 181
+ S+ SAF A S
Sbjct: 1153 MPLSAEISAFAAPS 1166
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -3
Query: 402 TSPLCTLGTTHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSREXISHLSTPLMSPYNAR 223
T+P T H + + D+ PN++ + +VV+ R + + + Y
Sbjct: 1049 TTPGATSNDLHHLVSVMCDKRLFVPNKLMGRLLPIVVYGMRCKIMPTRIRHAATVAYGKM 1108
Query: 222 LESSSTGSAFPADS 181
+ S+ SAF A S
Sbjct: 1109 MPLSAEISAFAAPS 1122
>Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical
protein T08G3.7 protein.
Length = 943
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Frame = +3
Query: 138 IYYLAKPQPRERAW------ENQRGKQTLL 209
+YY KP ER W +NQ GK TLL
Sbjct: 589 LYYFGKPLDYERRWRYSLFLDNQDGKNTLL 618
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical
protein F36D3.5 protein.
Length = 1152
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Frame = +3
Query: 138 IYYLAKPQPRERAW------ENQRGKQTLL 209
+YY KP ER W +NQ GK TLL
Sbjct: 790 LYYFGKPLDYERRWRYSLFLDNQGGKNTLL 819
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Frame = +3
Query: 138 IYYLAKPQPRERAW------ENQRGKQTLL 209
+YY KP ER W +NQ GK TLL
Sbjct: 851 LYYFGKPLDYERRWRYSLFLDNQDGKNTLL 880
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 81 PRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKQTLL 209
P H ++D I ++ ++ I Y +P ER W++ R K L
Sbjct: 38 PLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRL 80
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 81 PRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKQTLL 209
P H ++D I ++ ++ I Y +P ER W++ R K L
Sbjct: 38 PLHKVTDYKHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRL 80
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -3
Query: 480 PSQTPRLAVSSNRITREF*TATSVSATSPLCTLGTTHRAPAD---IIDRAPLPPNRVSNE 310
P + P + S + T + +A S + T GTT+ APAD D LP + +
Sbjct: 432 PRKQPSIVPPSQKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATDEGGLPQDLFEDT 491
Query: 309 TMKVVVFQRRSRE 271
+RS +
Sbjct: 492 EKNETASPKRSND 504
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -3
Query: 480 PSQTPRLAVSSNRITREF*TATSVSATSPLCTLGTTHRAPAD---IIDRAPLPPNRVSNE 310
P + P + S + T + +A S + T GTT+ APAD D LP + +
Sbjct: 432 PRKQPSIVPPSQKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATDEGGLPQDLFEDT 491
Query: 309 TMKVVVFQRRSRE 271
+RS +
Sbjct: 492 EKNETASPKRSND 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,967,900
Number of Sequences: 27780
Number of extensions: 250954
Number of successful extensions: 831
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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