Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0099
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.33
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.33
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 32 0.33
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 32 0.33
Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z66494-1|CAA91262.2| 320|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 9.4
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 9.4
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = -1
Query: 411 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETTPTYATPL 232
T+ + TSP T+GT APA++ P N S+ T S T PT P+
Sbjct: 623 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT-VPPV 681
Query: 231 MSPYNARLESSSTGSSFPADSPKPVPLAVV 142
+ S++T ++ + + P V
Sbjct: 682 TTTTPTTTTSTTTTTTTTTTTTQTTPTTPV 711
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = -1
Query: 411 TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETTPTYATPL 232
T+ + TSP T+GT APA++ P N S+ T S T PT P+
Sbjct: 679 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT-VPPV 737
Query: 231 MSPYNARLESSSTGSSFPADSPKPVPLAVV 142
+ S++T ++ + + P V
Sbjct: 738 TTTTPTTTTSTTTTTTTTTTTTQTTPTTPV 767
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 527 FLSSLSCLRTPALFVDRCTAPVKLPAWQCPRTGS 426
FL+ C T +F + C P+ LPA C TGS
Sbjct: 735 FLTQEDCAATCDVFTNPCNQPIALPATLCSGTGS 768
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 527 FLSSLSCLRTPALFVDRCTAPVKLPAWQCPRTGS 426
FL+ C T +F + C P+ LPA C TGS
Sbjct: 1153 FLTQEDCAATCDVFTNPCNQPIALPATLCSGTGS 1186
>Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical
protein ZC504.1 protein.
Length = 460
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 539 LHARFLSSLSCLRTPALFVDRCTAPVKLPAWQCPRTGSR 423
L RF S +CL +L + R ++PV +CP TG R
Sbjct: 48 LCTRFCQSTACLAGQSLLLARDSSPVNCKDMECP-TGYR 85
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical protein
F32E10.3 protein.
Length = 876
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Frame = -1
Query: 447 AVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRR 268
AV+ T E + T+ +T P T AP+ + +VS E M+ +V +
Sbjct: 751 AVTPAPTTSEKTSTTAAPSTKPAEETTTTTEAPSTTTKPVTVAVKKVSPEEMEKLVKKES 810
Query: 267 SRETT-----PTYATPLMSPYN-ARLESSSTGSSFPA 175
+ + T PT+ P ++P+ L + +T PA
Sbjct: 811 TEKVTLLPPLPTFTFPTLAPFTFPTLPTLATTKPSPA 847
>Z66494-1|CAA91262.2| 320|Caenorhabditis elegans Hypothetical
protein C34C6.1 protein.
Length = 320
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -2
Query: 629 KLFILKDR*AVLSQSLCVLNIWIKPAF--ALLLHARFLSSLSCLRTPALF 486
KL L DR +SLC NI+I F A A + SC+ + LF
Sbjct: 220 KLISLSDRIKSAEKSLCFSNIYISLTFLAAAASQALYAFCTSCMSSDLLF 269
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 279 FQRRSRETTPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 127
F+R P +ATPL S +L SSS+G P ++ P +SLDS+
Sbjct: 4248 FEREKPPAIPAHATPLESV--LKLGSSSSGEEAPRNALYDDP---ISLDSQ 4293
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 279 FQRRSRETTPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 127
F+R P +ATPL S +L SSS+G P ++ P +SLDS+
Sbjct: 4248 FEREKPPAIPAHATPLESV--LKLGSSSSGEEAPRNALYDDP---ISLDSQ 4293
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 279 FQRRSRETTPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 127
F+R P +ATPL S +L SSS+G P ++ P +SLDS+
Sbjct: 4248 FEREKPPAIPAHATPLESV--LKLGSSSSGEEAPRNALYDDP---ISLDSQ 4293
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = -1
Query: 375 TLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETTPTYATPLMSPYNARLESSS 196
T+GT APA++ P N S+ T S T PT P+ + S++
Sbjct: 514 TIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT-VPPVTTTTPTTTTSTT 572
Query: 195 TGSSFPADSPKPVPLAVV 142
T ++ + + P V
Sbjct: 573 TTTTTTTTTTQTTPTTPV 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,092,837
Number of Sequences: 27780
Number of extensions: 351200
Number of successful extensions: 1095
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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