Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0088
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 55 3e-07
AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens ... 31 2.8
BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marke... 31 5.0
BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marke... 31 5.0
BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosia... 31 5.0
AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein prot... 31 5.0
AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marke... 31 5.0
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 6.6
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 6.6
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 30 6.6
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +3
Query: 432 MIGRADIEGSKSNVAMNAWLPQASYPVVTF 521
MIGRADIEGSKS+VAMNAW PQASYP F
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30
>AK027290-1|BAB55018.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ14384 fis, clone HEMBA1002150. ).
Length = 433
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 311
P L AP+ Y + L RP S P + ++H P+ + + +P+++++
Sbjct: 107 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIVANY 165
Query: 312 TIATTSHQ*GKTNLSHDGLNPAHVP 386
+++Q G ++SH PAH P
Sbjct: 166 PDLPSAYQPGILSVSHSAQPPAHQP 190
>BC105633-1|AAI05634.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 311
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 312 TIATTSHQ*GKTNLSHDGLNPAHVP 386
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC104484-1|AAI04485.1| 757|Homo sapiens tumor endothelial marker
1, precursor protein.
Length = 757
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 311
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 312 TIATTSHQ*GKTNLSHDGLNPAHVP 386
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC051340-1|AAH51340.1| 757|Homo sapiens CD248 molecule, endosialin
protein.
Length = 757
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 311
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 312 TIATTSHQ*GKTNLSHDGLNPAHVP 386
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>AJ295846-1|CAC34381.1| 757|Homo sapiens endosialin protein
protein.
Length = 757
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 311
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 312 TIATTSHQ*GKTNLSHDGLNPAHVP 386
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>AF279142-1|AAG00867.1| 757|Homo sapiens tumor endothelial marker 1
precursor protein.
Length = 757
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 138 PTLGAPQ*AYPCRIRLGWLRP*RRSGIIPRMVASHHRPLAECMNQM--SETAVPLVLSSI 311
P L AP+ Y + L RP S P + ++H P+ + + +P++ ++
Sbjct: 431 PPLSAPRVPYHSSV-LSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANY 489
Query: 312 TIATTSHQ*GKTNLSHDGLNPAHVP 386
+++Q G ++SH PAH P
Sbjct: 490 PDLPSAYQPGILSVSHSAQPPAHQP 514
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 209 TPLRPKPA*PNPARICSLWSPESRE 135
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 209 TPLRPKPA*PNPARICSLWSPESRE 135
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting
protein protein.
Length = 1183
Score = 30.3 bits (65), Expect = 6.6
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = -1
Query: 387 RERELGLDRRETG*FYPTDGLSLR**YCSVREEPQFRTFGSCTRRAAGGAKLPSAGLCLN 208
R+R+ +D ++ YP L+LR +RE+P + +F + + R GA+ GL
Sbjct: 78 RKRDAFMDHLKSK--YPQHALALRGQQDRMREQPNYWSFKTRSSRHTQGAQ---PGLADQ 132
Query: 207 ASKAEASLAESGKDMLTVEPRESGGSKQCDFTSR--VSHSKREKRRRSP 67
A+K + AES + M E G S+ F +S S + + RSP
Sbjct: 133 AAKLSYASAESLETMSEAE-LPLGFSRMNRFRQSLPLSRSASQTKPRSP 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,904,841
Number of Sequences: 237096
Number of extensions: 2171514
Number of successful extensions: 4810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4807
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -