Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0021
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786...    31   2.8  
BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.       31   2.8  

>BC128392-1|AAI28393.1|  782|Homo sapiens zinc finger protein 786
           protein.
          Length = 782

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 240 RAWENSGERRPC*A*XXSGIVRRHERCSISGRSFR 344
           RAWE   +R        S  V+RH RC + G+SFR
Sbjct: 216 RAWEKFNKRAETQMPWSSPRVQRHFRCGVCGKSFR 250


>BC109245-1|AAI09246.1|  753|Homo sapiens ZNF786 protein protein.
          Length = 753

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 240 RAWENSGERRPC*A*XXSGIVRRHERCSISGRSFR 344
           RAWE   +R        S  V+RH RC + G+SFR
Sbjct: 187 RAWEKFNKRAETQMPWSSPRVQRHFRCGVCGKSFR 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,082,892
Number of Sequences: 237096
Number of extensions: 2459791
Number of successful extensions: 5792
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5792
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)