Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20113
         (627 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g08160.1 68417.m01347 glycosyl hydrolase family 10 protein / ...    31   0.47 
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea...    31   0.83 
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea...    31   0.83 
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A...    29   3.3  
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A...    29   3.3  
At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transfera...    27   7.7  

>At4g08160.1 68417.m01347 glycosyl hydrolase family 10 protein /
           carbohydrate-binding domain-containing protein  ;
           contains Pfam profiles PF00331: Glycosyl hydrolase
           family 10, PF02018: Carbohydrate binding domain
          Length = 752

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 190 YENQGKGSIIQNVVNNLIIDGSGTPWSTATSCGSATDSTLSESTSPITLDSSWP 351
           YEN G G  +  V N+ ++DG   PW T  +C  +       +  P+  D+  P
Sbjct: 189 YENPGFG--VNIVENSEVLDGGTKPWFTLGNCKLSVGQGAPRTLPPMARDTLGP 240


>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, gizzard smooth muscle
           (Swiss-Prot:P10587) [Gallus gallus]
          Length = 433

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +1

Query: 127 EKLY--NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDGSGTPWSTATSCG-SAT 297
           EKL+  NS L+  Y  ++  S ++ENQ K  + QNV    ++D   T  + + S G S  
Sbjct: 298 EKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRGPSEF 357

Query: 298 DSTLSESTSPITL 336
           ++  S  T  ++L
Sbjct: 358 EANGSHGTDTLSL 370


>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, gizzard smooth muscle
           (Swiss-Prot:P10587) [Gallus gallus]
          Length = 434

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +1

Query: 127 EKLY--NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDGSGTPWSTATSCG-SAT 297
           EKL+  NS L+  Y  ++  S ++ENQ K  + QNV    ++D   T  + + S G S  
Sbjct: 299 EKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRGPSEF 358

Query: 298 DSTLSESTSPITL 336
           ++  S  T  ++L
Sbjct: 359 EANGSHGTDTLSL 371


>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 390

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 130 KLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 246
           K+ + IL+G  D A     EY  Q K   IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141


>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 497

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 130 KLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 246
           K+ + IL+G  D A     EY  Q K   IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141


>At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 484

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +1

Query: 139 NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDGSGTPWSTATSCGSATDSTLSES 318
           N + TG+ +  + +  E  N+GKG II+     ++I          T CG   +STL   
Sbjct: 326 NQVGTGENEDWLPKGFEERNKGKGLIIRGWAPQVLILDHKAIGGFVTHCG--WNSTLEGI 383

Query: 319 TSPITLDSSWP 351
            + + +  +WP
Sbjct: 384 AAGLPM-VTWP 393


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,579,284
Number of Sequences: 28952
Number of extensions: 243956
Number of successful extensions: 627
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)