Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0161
         (363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    29   0.071
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    28   0.094
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    27   0.16 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.22 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    26   0.50 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   0.66 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   0.87 
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   1.2  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   3.5  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   3.5  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   3.5  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   3.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   4.7  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   6.2  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    22   6.2  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 362 AHHVALGCMTTKSRGHQLYDLIDEFDLCVLNNGS 261
           A H A G   T ++G  +  L+D   L VLN G+
Sbjct: 124 AWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGT 157


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 28.3 bits (60), Expect = 0.094
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 362 AHHVALGCMTTKSRGHQLYDLIDEFDLCVLNNGS 261
           A H   G      RG +L  +++   L +LNNGS
Sbjct: 126 AWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGS 159


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 362 AHHVALGCMTTKSRGHQLYDLIDEFDLCVLNNG 264
           A H   G   T  RG +L+ ++++  L V+N G
Sbjct: 137 ARHEEWGSPRTCDRGEELHGMVEQLGLIVINQG 169


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 240 NRNPSAIDVSFCSAPITPLCEWWVHD 163
           N+  S +D++FCS  ++    W V D
Sbjct: 161 NKRTSIVDITFCSTTLSERLNWRVSD 186


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 240 NRNPSAIDVSFCSAPITPLCEWWVHDDSMGSYHFPTLTRVLLSVDRYQIN 91
           N   S +DVSFCS  +     W V D++   ++  T+  V+  V R + N
Sbjct: 174 NGRNSIVDVSFCSPSLVGDNNWRVCDETPSDHN--TIKFVVGRVPRQRAN 221


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 362 AHHVALGCMTTKSRGHQLYDLIDEFDLCVLNNGS 261
           A H A G   TK +G  L  L++   L VLN G+
Sbjct: 124 AWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGT 157


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -1

Query: 243 PNRNPSAIDVSFCSAPITPLCEWWVHDDSMGSYHFPTLTRV 121
           P R  SAID++F S  +     W V  D M S H   L  +
Sbjct: 169 PERK-SAIDLTFVSQSLMETTGWEVLPDYMNSDHIGILITI 208


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 170 CMMILWGAIIFLRL 129
           C++ +WG ++FLRL
Sbjct: 198 CLLNIWGVMLFLRL 211


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 75  FLYNKTDWTKYNELSLTAFSN 13
           FLYN  DW  Y +  + A  N
Sbjct: 114 FLYNSADWDTYYKNMIWARDN 134


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 75  FLYNKTDWTKYNELSLTAFSN 13
           FLYN  DW  Y +  + A  N
Sbjct: 114 FLYNSADWDTYYKNMIWARDN 134


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 75  FLYNKTDWTKYNELSLTAFSN 13
           FLYN  DW  Y +  + A  N
Sbjct: 114 FLYNSADWDTYYKNMIWARDN 134


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 75  FLYNKTDWTKYNELSLTAFSN 13
           FLYN  DW  Y +  + A  N
Sbjct: 114 FLYNSADWDTYYKNMIWARDN 134


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 240 NRNPSAIDVSFCSAPITPLCEWWV 169
           N   S ID++FCS  +     W V
Sbjct: 163 NSRTSIIDLTFCSPALASSMNWRV 186


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 228 SAIDVSFCSAPITPLCEWWVHDDSMGSYH 142
           S +DV+F S+ I     W V +    S H
Sbjct: 229 SVVDVTFASSSIAQPSTWLVRNTDTRSDH 257


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -1

Query: 144 HFP-TLTRVLLSVDRYQINPPIEKFLYNK-TDWTKYNELSLTAFSNFEVN 1
           H+P  L R  L++        +E +  N+   W K        FSN+E+N
Sbjct: 210 HYPDVLLREKLAIKVDLKEERVEVWFKNRRAKWRKQKREEQEQFSNYEIN 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,003
Number of Sequences: 2352
Number of extensions: 7165
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)