BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0158 (691 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_04_0203 - 14828009-14828110,14828171-14828269,14828375-148284... 30 1.5 01_06_1539 + 38107108-38109649,38110563-38110915 28 6.1 >11_04_0203 - 14828009-14828110,14828171-14828269,14828375-14828461, 14828733-14829111,14829214-14829377,14829544-14829636, 14829843-14829989,14830065-14830166,14830392-14830490, 14830669-14830803,14830928-14831006,14831111-14831186, 14831281-14831370,14831723-14831798,14831880-14831914, 14832303-14832377,14832468-14832840 Length = 736 Score = 30.3 bits (65), Expect = 1.5 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +1 Query: 235 EYDIDKSGLVRPHLSLMNHFCVRSYFL 315 EYD D SG RP ++ N CV FL Sbjct: 111 EYDADTSGAARPPGNVQNRMCVHPKFL 137 >01_06_1539 + 38107108-38109649,38110563-38110915 Length = 964 Score = 28.3 bits (60), Expect = 6.1 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 7/32 (21%) Frame = -2 Query: 597 IDYNRNSLCGIFP-------NMWKREYHDRNL 523 +D++RN + G+FP N+WK E + NL Sbjct: 217 LDFSRNQIIGVFPIAISNLRNLWKIELYQNNL 248 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,355,176 Number of Sequences: 37544 Number of extensions: 267377 Number of successful extensions: 480 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 470 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 480 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1756684372 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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