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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0152
         (567 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligas...    31   3.7  
BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligas...    31   3.7  
AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alp...    31   3.7  
AK027803-1|BAB55380.1|  811|Homo sapiens protein ( Homo sapiens ...    31   3.7  
AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein.      31   3.7  

>BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 1 protein.
          Length = 1749

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 105 LKKYELNCNFKNHQVVSSFCRENAIRGGSLIIVNKDYKCKER---RDIVSLSVNGLLKWP 275
           L +Y L C     QVV+   R N +   S +   +D KC+E    +DI+ L +   L  P
Sbjct: 645 LVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDP 704


>BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligase
           E3 component n-recognin 1 protein.
          Length = 1749

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 105 LKKYELNCNFKNHQVVSSFCRENAIRGGSLIIVNKDYKCKER---RDIVSLSVNGLLKWP 275
           L +Y L C     QVV+   R N +   S +   +D KC+E    +DI+ L +   L  P
Sbjct: 645 LVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDP 704


>AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3
           alpha-I protein.
          Length = 1749

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 105 LKKYELNCNFKNHQVVSSFCRENAIRGGSLIIVNKDYKCKER---RDIVSLSVNGLLKWP 275
           L +Y L C     QVV+   R N +   S +   +D KC+E    +DI+ L +   L  P
Sbjct: 645 LVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDP 704


>AK027803-1|BAB55380.1|  811|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14897 fis, clone PLACE1004743, weakly similar to
           PROBABLE N-END-RECOGNIZING PROTEIN. ).
          Length = 811

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 105 LKKYELNCNFKNHQVVSSFCRENAIRGGSLIIVNKDYKCKER---RDIVSLSVNGLLKWP 275
           L +Y L C     QVV+   R N +   S +   +D KC+E    +DI+ L +   L  P
Sbjct: 442 LVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDP 501


>AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein.
          Length = 1709

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 105 LKKYELNCNFKNHQVVSSFCRENAIRGGSLIIVNKDYKCKER---RDIVSLSVNGLLKWP 275
           L +Y L C     QVV+   R N +   S +   +D KC+E    +DI+ L +   L  P
Sbjct: 628 LVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDP 687


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,729,193
Number of Sequences: 237096
Number of extensions: 1376977
Number of successful extensions: 2029
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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