Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0148
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.2  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 81  LIPHLRMLIAIWPASTKILVTFLKLYSR 164
           LIPH  + +A W   T++   F  +++R
Sbjct: 130 LIPHFLLPVAAWTNGTEV-AKFKNMWTR 156


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 81  LIPHLRMLIAIWPASTKILVTFLKLYSR 164
           LIPH  + +A W   T++   F  +++R
Sbjct: 130 LIPHFLLPVAAWTNGTEV-AKFKNMWTR 156


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 490 DFGNHPNRI*CNRYLVC 540
           DFG +P+   C++Y  C
Sbjct: 28  DFGFYPHHTSCDKYWKC 44


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 490 DFGNHPNRI*CNRYLVC 540
           DFG +P+   C++Y  C
Sbjct: 28  DFGFYPHHTSCDKYWKC 44


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 514 CDSDGYRNRCLRTRYEGGLV 455
           CD   Y + CLR +++  L+
Sbjct: 336 CDEAHYASNCLRVQFQKKLL 355


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 51  LCNATQGRFKLIPHLRML 104
           L NAT+  F  +PHL++L
Sbjct: 260 LLNATKDLFGNMPHLQVL 277


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 561 FHFLFGHANQVPIASNAIRMVTEIAAYVPD 472
           FH+    +   P+ S  +  + +  AY PD
Sbjct: 272 FHWHLTDSQSFPLVSQRVPQLAKNGAYGPD 301


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 80  FESPLCSIAEHRLHLAFPSAYCPCCY 3
           F SP+  IAE++    F  +  P C+
Sbjct: 201 FTSPMLVIAEYKQLDYFDGSKVPACH 226


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 528 VPGLHDRTKSGNILLCPQSGRREQTFRF 611
           V G    +K    LLCP  G    +FR+
Sbjct: 239 VLGYQRHSKQNVALLCPAQGFPSPSFRW 266



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -3

Query: 136 RIFVDAGQIAMSIRKCGINLNRPCVALQSTGY 41
           ++F++   I  ++ +        CVA  S GY
Sbjct: 558 KVFINGTLIIENVERASDQATYDCVAKNSQGY 589


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,781
Number of Sequences: 336
Number of extensions: 3792
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)