BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0148 (612 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 40 2e-04 SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 38 0.002 SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.033 SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 33 0.033 SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 32 0.057 SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 31 0.17 SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.30 SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 29 0.40 SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 29 0.70 SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 28 0.93 SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 27 1.6 SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces po... 27 2.8 SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 3.7 SPBC19C2.15c ||SPBC2F12.16|phosphoprotein phosphatase |Schizosac... 26 3.7 SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 26 3.7 SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 26 4.9 SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 26 4.9 SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 25 6.5 SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 8.6 SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 25 8.6 SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 25 8.6 >SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 40.3 bits (90), Expect = 2e-04 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +2 Query: 14 GNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193 GN +D AL YT+AI+I+P +SN A+ + G A++ T L L P Sbjct: 90 GNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPH 149 Query: 194 FPDAYCNL 217 A+ L Sbjct: 150 HARAFGRL 157 >SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccharomyces pombe|chr 2|||Manual Length = 1102 Score = 37.5 bits (83), Expect = 0.002 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Frame = +2 Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGN-IPEAIQSYRTAL 178 + ++G ++ AL Y+RAI++NP ++ +L ++++ N I +A+ +Y+ A Sbjct: 621 WCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAA 680 Query: 179 KLKPDFP 199 +L P P Sbjct: 681 ELDPTNP 687 Score = 37.1 bits (82), Expect = 0.002 Identities = 21/72 (29%), Positives = 33/72 (45%) Frame = +2 Query: 11 MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKP 190 +G + D AL Y A++ NP A +A+I ++ P AI+ Y+T L P Sbjct: 340 IGRLAELFDDQDKALSAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDP 399 Query: 191 DFPDAYCNLAHC 226 + + L HC Sbjct: 400 KQGEIWSALGHC 411 >SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 476 Score = 33.1 bits (72), Expect = 0.033 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 11 MGNTLKEMQDVAGALQCYTRAIQI--NPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184 +GN + + A A++ YT AI + + A A +SN A+ + G A+ + + ++ Sbjct: 29 IGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAKQSDRI 88 Query: 185 KPDFP 199 KPD P Sbjct: 89 KPDVP 93 >SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 473 Score = 33.1 bits (72), Expect = 0.033 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = +2 Query: 8 NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187 N N + + A+ YT+AI+++ A +SN + H S + AI A++ Sbjct: 10 NEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECD 69 Query: 188 PDFPDAY 208 P++ AY Sbjct: 70 PEYAKAY 76 >SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual Length = 665 Score = 32.3 bits (70), Expect = 0.057 Identities = 17/69 (24%), Positives = 35/69 (50%) Frame = +2 Query: 11 MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKP 190 + N ++ + AL+C RAIQ++P F A++ H + ++ S+R A+++ Sbjct: 437 LANCFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNV 496 Query: 191 DFPDAYCNL 217 +A+ L Sbjct: 497 RHYNAWYGL 505 Score = 29.1 bits (62), Expect = 0.53 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = +2 Query: 11 MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALK 181 +G K+ + A C+ A+ INP A NL +I D+ N+ I Y TA+K Sbjct: 121 LGTMYKKAGFLKKATDCFVEAVSINPYNFSAFQNLTAIGVPLDANNV-FVIPPYLTAMK 178 >SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizosaccharomyces pombe|chr 2|||Manual Length = 598 Score = 30.7 bits (66), Expect = 0.17 Identities = 15/72 (20%), Positives = 35/72 (48%) Frame = +2 Query: 5 SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184 + +G + +++ + C+ +A+Q P+ + L + ++ EA+ SY A+ L Sbjct: 442 AGLGIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSL 501 Query: 185 KPDFPDAYCNLA 220 +P + N+A Sbjct: 502 QPQYVRVRSNMA 513 Score = 28.3 bits (60), Expect = 0.93 Identities = 13/61 (21%), Positives = 28/61 (45%) Frame = +2 Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181 ++ +G L + A+ Y RA+ + P + SN+A + + G +A + A+ Sbjct: 475 WNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINLGYFEDAAKHLLAAID 534 Query: 182 L 184 + Sbjct: 535 I 535 >SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1224 Score = 29.9 bits (64), Expect = 0.30 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = +3 Query: 294 AAGEKQTAISTSAPLHVVSADT*L*EGHRRPSREPLLGESASVAQ 428 +AG TA STSAPL + D G+ RP E L E V+Q Sbjct: 1095 SAGRSSTAASTSAPLTYPAGDRSHIPGNLRPIYEMLNAELQRVSQ 1139 >SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1389 Score = 29.5 bits (63), Expect = 0.40 Identities = 13/75 (17%), Positives = 36/75 (48%) Frame = +2 Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181 ++ +G + + V A CY +++ +N + +N ++ + ++ A ++ ++ Sbjct: 933 WNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALCIQNHDVECANAAFTRSIS 992 Query: 182 LKPDFPDAYCNLAHC 226 + PD A+ A+C Sbjct: 993 IDPDNSQAWLGKAYC 1007 Score = 27.5 bits (58), Expect = 1.6 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = +2 Query: 50 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193 A+ + A++I+P +A S L + SG A++++ A L PD Sbjct: 669 AIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDPD 716 Score = 25.8 bits (54), Expect = 4.9 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +2 Query: 2 YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181 ++N G + DV A +TR+I I+P + A A G+I +A+Q A + Sbjct: 967 WANYGALCIQNHDVECANAAFTRSISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFE 1026 Query: 182 L 184 + Sbjct: 1027 I 1027 >SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 |Schizosaccharomyces pombe|chr 1|||Manual Length = 565 Score = 28.7 bits (61), Expect = 0.70 Identities = 18/78 (23%), Positives = 37/78 (47%) Frame = +2 Query: 5 SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184 S +GN + + A+ + RA+Q+N + A + + + + N AI+SYR A+ + Sbjct: 342 SIIGNYYSLLSEHEKAVTYFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYRLAVDV 401 Query: 185 KPDFPDAYCNLAHCLQIV 238 A+ L +++ Sbjct: 402 NRKDYRAWYGLGQTYEVL 419 >SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 817 Score = 28.3 bits (60), Expect = 0.93 Identities = 15/81 (18%), Positives = 35/81 (43%) Frame = +2 Query: 8 NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187 ++G + D+ A+ C+ +++INP + A++++ L + Sbjct: 526 SLGKYYYKKGDLLQAMNCFNESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLSIN 585 Query: 188 PDFPDAYCNLAHCLQIVCDWT 250 P+ +++ NLA + D T Sbjct: 586 PEDGESWNNLASAMLKAKDHT 606 >SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 591 Score = 27.5 bits (58), Expect = 1.6 Identities = 14/61 (22%), Positives = 30/61 (49%) Frame = +2 Query: 14 GNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193 GN +D A+ +T+AI ++ +SN ++ + + +A++ +LKPD Sbjct: 9 GNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKPD 68 Query: 194 F 196 + Sbjct: 69 W 69 >SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 278 Score = 26.6 bits (56), Expect = 2.8 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2 Query: 296 CSATMLTNFFIR--ASNPSSHTLFVNSGLNCNT 204 C++T +T + A+ HTLF ++GL+C T Sbjct: 154 CTSTAITGCLLNYGATYNYDHTLFKDNGLSCET 186 >SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1|Schizosaccharomyces pombe|chr 2|||Manual Length = 775 Score = 26.2 bits (55), Expect = 3.7 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -3 Query: 184 KLKRCSVRLYSFRNVTRIFVDAGQIAMSIRKCGINL 77 K+KRCS ++ R +T++ D +I +S IN+ Sbjct: 395 KIKRCSFPIHGVRLITKLQFDDDKIIVSTCSPRINI 430 >SPBC19C2.15c ||SPBC2F12.16|phosphoprotein phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 208 Score = 26.2 bits (55), Expect = 3.7 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 603 TFVPVVRTEGIAEYFHFLFGHANQVPIAS 517 T V V+T IAE FH +FG + P+ + Sbjct: 47 TLVRWVQTLAIAEVFHSIFGLVSSSPLTT 75 >SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pombe|chr 2|||Manual Length = 955 Score = 26.2 bits (55), Expect = 3.7 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -1 Query: 510 IRMVTEIAAYVPDTKAAL*ISRELVRVFVQHLHF 409 ++ + E+ Y + I ELVR+ V+HLH+ Sbjct: 339 LKQMVELDVYAEARQLFAPIYLELVRIIVRHLHY 372 >SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr 1|||Manual Length = 512 Score = 25.8 bits (54), Expect = 4.9 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 394 NLCLEKVQVLHKNPYKFPRDLQGRL-RIGYVSSDF 495 ++CL ++Q KNP KF L+ R+ RI Y + F Sbjct: 193 SICLYEIQEEKKNPKKFQLVLKSRICRIEYNVTKF 227 >SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 653 Score = 25.8 bits (54), Expect = 4.9 Identities = 8/32 (25%), Positives = 20/32 (62%) Frame = +3 Query: 501 PSESHLMQSVPGLHDRTKSGNILLCPQSGRRE 596 P+E+ + +VPG+ +R + ++ P+ R++ Sbjct: 556 PAEAEAVPAVPGMPERFTAADLAAVPEESRKQ 587 >SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 559 Score = 25.4 bits (53), Expect = 6.5 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = -2 Query: 371 FLKSCVSGYNMEW--CGCTDGSLFFS 300 FL S + N+ W CGC G++FF+ Sbjct: 494 FLTSVIGYGNVMWIFCGCMWGAIFFT 519 >SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1 complex subunit Tpr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1039 Score = 25.0 bits (52), Expect = 8.6 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 110 NLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 205 NLA ++ GN A ++Y + L+ P F DA Sbjct: 519 NLARCEEELGNTSVASEAYVSILEKHPSFIDA 550 >SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 222 Score = 25.0 bits (52), Expect = 8.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 526 DCIKCDSDGYRNRCLRTRYEGGL 458 DCI+ D DGYR C T G L Sbjct: 144 DCIE-DEDGYRFNCKNTGRRGTL 165 >SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces pombe|chr 3|||Manual Length = 607 Score = 25.0 bits (52), Expect = 8.6 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -1 Query: 258 LKSVQSHTICKQWAKLQYASGKSGLSLSAVLYDC 157 +KS+QS Q++K ++ +SLS+VLY C Sbjct: 96 IKSLQSFEKDFQFSKEKFKPCSCQVSLSSVLYHC 129 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,805,118 Number of Sequences: 5004 Number of extensions: 60689 Number of successful extensions: 220 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 220 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 267622334 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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