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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0148
         (612 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc...    40   2e-04
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha...    38   0.002
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    33   0.033
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...    33   0.033
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ...    32   0.057
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos...    31   0.17 
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    30   0.30 
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb...    29   0.40 
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ...    29   0.70 
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi...    28   0.93 
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces...    27   1.6  
SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces po...    27   2.8  
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1...    26   3.7  
SPBC19C2.15c ||SPBC2F12.16|phosphoprotein phosphatase |Schizosac...    26   3.7  
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb...    26   3.7  
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|...    26   4.9  
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar...    26   4.9  
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy...    25   6.5  
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1...    25   8.6  
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa...    25   8.6  
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ...    25   8.6  

>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 40.3 bits (90), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = +2

Query: 14  GNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193
           GN     +D   AL  YT+AI+I+P     +SN A+ +   G    A++   T L L P 
Sbjct: 90  GNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPH 149

Query: 194 FPDAYCNL 217
              A+  L
Sbjct: 150 HARAFGRL 157


>SPBC23E6.09 |ssn6||transcriptional corepressor
           Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1102

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGN-IPEAIQSYRTAL 178
           + ++G    ++     AL  Y+RAI++NP  ++   +L ++++   N I +A+ +Y+ A 
Sbjct: 621 WCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAA 680

Query: 179 KLKPDFP 199
           +L P  P
Sbjct: 681 ELDPTNP 687



 Score = 37.1 bits (82), Expect = 0.002
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = +2

Query: 11  MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKP 190
           +G   +   D   AL  Y  A++ NP    A   +A+I ++    P AI+ Y+T L   P
Sbjct: 340 IGRLAELFDDQDKALSAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDP 399

Query: 191 DFPDAYCNLAHC 226
              + +  L HC
Sbjct: 400 KQGEIWSALGHC 411


>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 33.1 bits (72), Expect = 0.033
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 11  MGNTLKEMQDVAGALQCYTRAIQI--NPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184
           +GN   + +  A A++ YT AI +  + A A  +SN A+ +   G    A+   + + ++
Sbjct: 29  IGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAKQSDRI 88

Query: 185 KPDFP 199
           KPD P
Sbjct: 89  KPDVP 93


>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score = 33.1 bits (72), Expect = 0.033
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +2

Query: 8   NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187
           N  N   +   +  A+  YT+AI+++   A  +SN +  H  S +   AI     A++  
Sbjct: 10  NEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECD 69

Query: 188 PDFPDAY 208
           P++  AY
Sbjct: 70  PEYAKAY 76


>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
           subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 665

 Score = 32.3 bits (70), Expect = 0.057
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = +2

Query: 11  MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKP 190
           + N     ++ + AL+C  RAIQ++P F  A++     H  +    ++  S+R A+++  
Sbjct: 437 LANCFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNV 496

Query: 191 DFPDAYCNL 217
              +A+  L
Sbjct: 497 RHYNAWYGL 505



 Score = 29.1 bits (62), Expect = 0.53
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 11  MGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALK 181
           +G   K+   +  A  C+  A+ INP    A  NL +I    D+ N+   I  Y TA+K
Sbjct: 121 LGTMYKKAGFLKKATDCFVEAVSINPYNFSAFQNLTAIGVPLDANNV-FVIPPYLTAMK 178


>SPBC725.07 |pex5||peroxisomal targeting signal receptor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 30.7 bits (66), Expect = 0.17
 Identities = 15/72 (20%), Positives = 35/72 (48%)
 Frame = +2

Query: 5   SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184
           + +G  +  +++   +  C+ +A+Q  P+     + L +   ++    EA+ SY  A+ L
Sbjct: 442 AGLGIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSL 501

Query: 185 KPDFPDAYCNLA 220
           +P +     N+A
Sbjct: 502 QPQYVRVRSNMA 513



 Score = 28.3 bits (60), Expect = 0.93
 Identities = 13/61 (21%), Positives = 28/61 (45%)
 Frame = +2

Query: 2   YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
           ++ +G  L   +    A+  Y RA+ + P +    SN+A  + + G   +A +    A+ 
Sbjct: 475 WNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINLGYFEDAAKHLLAAID 534

Query: 182 L 184
           +
Sbjct: 535 I 535


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 29.9 bits (64), Expect = 0.30
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +3

Query: 294  AAGEKQTAISTSAPLHVVSADT*L*EGHRRPSREPLLGESASVAQ 428
            +AG   TA STSAPL   + D     G+ RP  E L  E   V+Q
Sbjct: 1095 SAGRSSTAASTSAPLTYPAGDRSHIPGNLRPIYEMLNAELQRVSQ 1139


>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1389

 Score = 29.5 bits (63), Expect = 0.40
 Identities = 13/75 (17%), Positives = 36/75 (48%)
 Frame = +2

Query: 2    YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
            ++ +G    + + V  A  CY +++ +N   +   +N  ++   + ++  A  ++  ++ 
Sbjct: 933  WNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALCIQNHDVECANAAFTRSIS 992

Query: 182  LKPDFPDAYCNLAHC 226
            + PD   A+   A+C
Sbjct: 993  IDPDNSQAWLGKAYC 1007



 Score = 27.5 bits (58), Expect = 1.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 50  ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193
           A+  +  A++I+P   +A S L   +  SG    A++++  A  L PD
Sbjct: 669 AIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDPD 716



 Score = 25.8 bits (54), Expect = 4.9
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = +2

Query: 2    YSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 181
            ++N G    +  DV  A   +TR+I I+P  + A    A      G+I +A+Q    A +
Sbjct: 967  WANYGALCIQNHDVECANAAFTRSISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFE 1026

Query: 182  L 184
            +
Sbjct: 1027 I 1027


>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 565

 Score = 28.7 bits (61), Expect = 0.70
 Identities = 18/78 (23%), Positives = 37/78 (47%)
 Frame = +2

Query: 5   SNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKL 184
           S +GN    + +   A+  + RA+Q+N  +  A + +   + +  N   AI+SYR A+ +
Sbjct: 342 SIIGNYYSLLSEHEKAVTYFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYRLAVDV 401

Query: 185 KPDFPDAYCNLAHCLQIV 238
                 A+  L    +++
Sbjct: 402 NRKDYRAWYGLGQTYEVL 419


>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 817

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 15/81 (18%), Positives = 35/81 (43%)
 Frame = +2

Query: 8   NMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 187
           ++G    +  D+  A+ C+  +++INP              +      A++++   L + 
Sbjct: 526 SLGKYYYKKGDLLQAMNCFNESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLSIN 585

Query: 188 PDFPDAYCNLAHCLQIVCDWT 250
           P+  +++ NLA  +    D T
Sbjct: 586 PEDGESWNNLASAMLKAKDHT 606


>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 591

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +2

Query: 14  GNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 193
           GN     +D   A+  +T+AI ++      +SN ++ +    +  +A++      +LKPD
Sbjct: 9   GNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKPD 68

Query: 194 F 196
           +
Sbjct: 69  W 69


>SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 278

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 296 CSATMLTNFFIR--ASNPSSHTLFVNSGLNCNT 204
           C++T +T   +   A+    HTLF ++GL+C T
Sbjct: 154 CTSTAITGCLLNYGATYNYDHTLFKDNGLSCET 186


>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
           Pop1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 775

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 184 KLKRCSVRLYSFRNVTRIFVDAGQIAMSIRKCGINL 77
           K+KRCS  ++  R +T++  D  +I +S     IN+
Sbjct: 395 KIKRCSFPIHGVRLITKLQFDDDKIIVSTCSPRINI 430


>SPBC19C2.15c ||SPBC2F12.16|phosphoprotein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 208

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 603 TFVPVVRTEGIAEYFHFLFGHANQVPIAS 517
           T V  V+T  IAE FH +FG  +  P+ +
Sbjct: 47  TLVRWVQTLAIAEVFHSIFGLVSSSPLTT 75


>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 955

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 510 IRMVTEIAAYVPDTKAAL*ISRELVRVFVQHLHF 409
           ++ + E+  Y    +    I  ELVR+ V+HLH+
Sbjct: 339 LKQMVELDVYAEARQLFAPIYLELVRIIVRHLHY 372


>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 512

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 394 NLCLEKVQVLHKNPYKFPRDLQGRL-RIGYVSSDF 495
           ++CL ++Q   KNP KF   L+ R+ RI Y  + F
Sbjct: 193 SICLYEIQEEKKNPKKFQLVLKSRICRIEYNVTKF 227


>SPAC57A7.04c |pabp||mRNA export shuttling protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 653

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +3

Query: 501 PSESHLMQSVPGLHDRTKSGNILLCPQSGRRE 596
           P+E+  + +VPG+ +R  + ++   P+  R++
Sbjct: 556 PAEAEAVPAVPGMPERFTAADLAAVPEESRKQ 587


>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 559

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 371 FLKSCVSGYNMEW--CGCTDGSLFFS 300
           FL S +   N+ W  CGC  G++FF+
Sbjct: 494 FLTSVIGYGNVMWIFCGCMWGAIFFT 519


>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
           complex subunit Tpr1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1039

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 110 NLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 205
           NLA   ++ GN   A ++Y + L+  P F DA
Sbjct: 519 NLARCEEELGNTSVASEAYVSILEKHPSFIDA 550


>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 222

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 526 DCIKCDSDGYRNRCLRTRYEGGL 458
           DCI+ D DGYR  C  T   G L
Sbjct: 144 DCIE-DEDGYRFNCKNTGRRGTL 165


>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 607

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 258 LKSVQSHTICKQWAKLQYASGKSGLSLSAVLYDC 157
           +KS+QS     Q++K ++      +SLS+VLY C
Sbjct: 96  IKSLQSFEKDFQFSKEKFKPCSCQVSLSSVLYHC 129


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,805,118
Number of Sequences: 5004
Number of extensions: 60689
Number of successful extensions: 220
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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