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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0147
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.55 
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.55 
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.55 
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.55 
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.55 
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    25   0.55 
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    25   0.55 
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    25   0.55 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.55 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    25   0.55 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   3.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   8.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   8.9  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   8.9  

>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 192 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 222


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 192 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 222


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 192 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 222


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 192 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 222


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 192 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 222


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 192 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 222


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 260 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 290


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV++S++ +LG+ +   S
Sbjct: 260 RRTLYYFFNLIV--PCVLISSMALLGFTLPPDS 290


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 215 RRLL*QFHNSLLTNPCVILSALEVLGYKVVASS 313
           RR L  F N ++  PCV+++++ VLG+ +   S
Sbjct: 229 RRTLYYFFNLIV--PCVLIASMAVLGFTLPPDS 259


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 102 PYILIRGNLASYGHKNPWRVLVSGLKAEDIEELKRFACGGYC 227
           P++ +R  +A      P  +L       D E  K F C GYC
Sbjct: 423 PFVYVR-EIAFSESCLPEEILCPHFNVTDGETTKTFCCKGYC 463


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 199 SRDLRAEVTVTIPQ*STYKSLRYTECFRSFGLQSSCF 309
           +RD +   TV++ Q   +     +  +  FG+QS+ F
Sbjct: 355 NRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDF 391


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 52  NYKCLYKQFIYKIK 11
           NYK LYK +I  I+
Sbjct: 112 NYKKLYKNYIINIE 125


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 52  NYKCLYKQFIYKIK 11
           NYK LYK +I  I+
Sbjct: 112 NYKKLYKNYIINIE 125


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 2   LVNLYFVNKLFI*TFIVQWKQIFFLSV 82
           LV L  +++L    ++ QW++++FL++
Sbjct: 216 LVRLLRLSRLV--RYVSQWEEVYFLNM 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,580
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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