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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0145
         (537 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.79 
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)        29   1.8  
SB_34112| Best HMM Match : RVT_1 (HMM E-Value=0.041)                   29   1.8  
SB_28275| Best HMM Match : REJ (HMM E-Value=0.0012)                    29   1.8  
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)                28   4.2  
SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0)                       28   5.6  
SB_26159| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_55906| Best HMM Match : SNARE (HMM E-Value=0.45)                    28   5.6  
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_30796| Best HMM Match : SNARE (HMM E-Value=0.45)                    28   5.6  
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_28604| Best HMM Match : FerB (HMM E-Value=5.19994e-41)              27   7.3  
SB_6758| Best HMM Match : Spectrin (HMM E-Value=0.00075)               27   7.3  
SB_52737| Best HMM Match : B_lectin (HMM E-Value=7.6)                  27   7.3  
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  
SB_35649| Best HMM Match : M (HMM E-Value=6e-09)                       27   9.7  
SB_12952| Best HMM Match : Peptidase_M50 (HMM E-Value=8.9e-07)         27   9.7  
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     27   9.7  

>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6406

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 15/53 (28%), Positives = 32/53 (60%)
 Frame = +3

Query: 378 LRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLSHV 536
           + V+ TVS  Q K  R L+ +  + DR++ TL L+ + ++++  D E+ ++ +
Sbjct: 580 VEVVSTVSRAQVKMDRILNTLDARRDRLQ-TLILECQDIKVSLTDFENDMAGI 631



 Score = 27.5 bits (58), Expect = 7.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 333 SSTDTNSILASIEERLRVLETVSAVQ---AKQTRRLDAIQDKLDRVETTLSLKLERVQLA 503
           S TD  + +A IEE L  +  VSAV     +Q R    +Q+ +          + R +  
Sbjct: 620 SLTDFENDMAGIEEELAGMRPVSAVHDTLKEQEREFKMLQEDIRETNDLAGELISRTEQL 679

Query: 504 AEDLE 518
            ED E
Sbjct: 680 IEDAE 684


>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
          Length = 1136

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
 Frame = +3

Query: 333 SSTDTNSILASIEERLRVLETVSAVQA----KQTRRLDAIQDKLDRVETTLSLKLERVQL 500
           S  + +S+ + + E+   LE   + Q     KQ + L+   ++ DR++  L    ERV+ 
Sbjct: 110 SLQEQSSVCSELHEKCEALEAQRSSQGEAIHKQMKELEFSSEREDRIKRELEQYQERVKT 169

Query: 501 AAEDLE-HRLSHV 536
             E +E  R +H+
Sbjct: 170 LEESIEAERAAHL 182


>SB_34112| Best HMM Match : RVT_1 (HMM E-Value=0.041)
          Length = 858

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
 Frame = +3

Query: 279 RTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAI-----Q 443
           R    E   LR+            ++   +E R + ++ ++ VQ +  R +DA+      
Sbjct: 202 RIEELEAKVLRLQDEKDAGERRNKTLRKQVESRDKEIDRLN-VQLEGGRPIDAVTKDVKS 260

Query: 444 DKLDRVETTLSLKLERVQLAAEDLEHRLSH 533
           D  DRV   L+++++ +Q A  DLE RL +
Sbjct: 261 DSSDRVVAHLNVQVDYLQQANRDLEKRLKN 290


>SB_28275| Best HMM Match : REJ (HMM E-Value=0.0012)
          Length = 1551

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 300 YNLRVYSPNTHSSTDTNSILASIEERLRVLETVS 401
           Y L + + +TH  TD  +ILA  ++RLR   T++
Sbjct: 660 YTLTLVNIHTHEITDLTAILAYPDDRLRATATIT 693


>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1042

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +3

Query: 345  TNSILASIEERLRVLE-TVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQ 497
            T+ ++AS +ERL   E  +  V+ ++ R +  + DKL RVE  L+ + + +Q
Sbjct: 937  THKLVASFKERLAESEQNLRRVREEKEREVAELMDKLVRVENELARERQDMQ 988


>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 190 SCYCFIGTVFLLFHRYYLTSRRFLSTCFV 104
           +C CF   V+LLFH   + S+RF +T ++
Sbjct: 407 ACMCFWADVYLLFHPAAI-SKRFQATVYI 434


>SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 479

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +3

Query: 333 SSTDTNSILASIEERLRVLET----VSAVQAKQTRRLDAIQDKLD-RVETTLSLKLERVQ 497
           + TDT S+ A  +   RVL +    VS VQA+  R L+ +  ++  +V  +L++ + RVQ
Sbjct: 403 AQTDTPSLSAMTQASTRVLRSLNIVVSRVQARVLRSLNIVVSRVQAKVLRSLNIVVSRVQ 462


>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
          Length = 328

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 22/70 (31%), Positives = 30/70 (42%)
 Frame = +3

Query: 201 STCLEYPYRQGDVKCGWGVLACLCLARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERL 380
           ST  E+  + G V C    L  L    TSPAE     V+SP+       NS+ +   +  
Sbjct: 199 STGEEFALKDGHVLCKLHYLEAL---DTSPAERDYQEVFSPDVDGDDSPNSLKSGRHKAK 255

Query: 381 RVLETVSAVQ 410
           RV  T +  Q
Sbjct: 256 RVRTTFTEDQ 265


>SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0)
          Length = 839

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 197 SPFLLLFYWHCFFVISPVLFNF 132
           S  ++L + HCF V+ PVL N+
Sbjct: 418 STIIILGFSHCFAVVMPVLLNY 439


>SB_26159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 281

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +3

Query: 336 STDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLS---LKLERVQLAA 506
           +TDT  +L +++  L  L+ V     +    LD +   LDRV  TL    L L+RV L  
Sbjct: 53  ATDTQRVLLTLDRVLLTLDRVLLTLDRVLLTLDRVLLTLDRVLLTLDRVLLTLDRVLLTL 112

Query: 507 E 509
           +
Sbjct: 113 D 113


>SB_55906| Best HMM Match : SNARE (HMM E-Value=0.45)
          Length = 101

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 348 NSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLS 476
           N +   I+E+ + ++T+S     QTR+L+ ++  ++R+E  L+
Sbjct: 38  NEVEKVIDEQEQRMKTMSVQLESQTRQLEFMKSHMERIEEKLT 80


>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3306

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/63 (20%), Positives = 30/63 (47%)
 Frame = +3

Query: 348 NSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRL 527
           N +L ++++  + LE  +A+ A+   +LD +      ++       +R      DLE++ 
Sbjct: 502 NGVLNTVDKHHQDLEKANAIAAELAAKLDELDGDSSGIKRIQDTANDRYDKVKRDLENKK 561

Query: 528 SHV 536
            H+
Sbjct: 562 HHL 564


>SB_30796| Best HMM Match : SNARE (HMM E-Value=0.45)
          Length = 299

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 348 NSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLS 476
           N +   I+E+ + ++T+S     QTR+L+ ++  ++R+E  L+
Sbjct: 236 NEVEKVIDEQEQRMKTMSVQLESQTRQLEFMKSHMERIEEKLT 278


>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1829

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 405 VQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLSHV 536
           ++A QT + D   + +DR +  +  K+E V+   EDL    ++V
Sbjct: 179 IKAHQTHKYDFTSNIIDREKELIKDKIEEVKSKQEDLSQEHANV 222


>SB_28604| Best HMM Match : FerB (HMM E-Value=5.19994e-41)
          Length = 687

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 420 TRRLDAIQDKLDRVETTLSLKLERVQLAA 506
           TR L+ +Q  +D+VE  L  K+   +LAA
Sbjct: 433 TRTLERLQKNMDKVELALDAKMPAPELAA 461


>SB_6758| Best HMM Match : Spectrin (HMM E-Value=0.00075)
          Length = 183

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 333 SSTDTNSILASIEERLRVLETVSAVQ---AKQTRRLDAIQDKLDRVETTLSLKLERVQLA 503
           S TD  + +A IEE L  +  VSAV     +Q R    +Q+ +          + R +  
Sbjct: 12  SLTDFENDMAGIEEELAGMRPVSAVHDTLKEQEREFKMLQEDIRETNDLAGELISRTEQL 71

Query: 504 AEDLE 518
            ED E
Sbjct: 72  IEDAE 76


>SB_52737| Best HMM Match : B_lectin (HMM E-Value=7.6)
          Length = 187

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +3

Query: 261 ACLCLARTSPAEPYNLR 311
           ACLCLAR++ AE +N R
Sbjct: 39  ACLCLARSALAEDFNSR 55


>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3259

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +3

Query: 285  SPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAI-QDKLDRV 461
            SP++  +L     +  ++     ++A IEE    LE +  +  K++++L+ I ++  D  
Sbjct: 2273 SPSQEVSLPNGDGSQGATMSNGPVMACIEEHEEQLEEMQFLLDKKSKKLERITKESKDLK 2332

Query: 462  ETTLSLKLERVQLAAEDLEHRLSHV 536
            E   SL+ E ++L+ +  E   S V
Sbjct: 2333 EKVTSLE-EELRLSNKQSERLTSQV 2356


>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 961

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 423 RRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLS 530
           R  DA++ +L++V      ++ERV +  E+L+ R+S
Sbjct: 495 REKDAVEKELEKVYQEGPCEIERVGMTFEELQKRVS 530


>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
          Length = 1279

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 342 DTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRV-ETTLSLKLERVQL 500
           D N  +A IEE  R L+   A QA +     A+   L  V ET  +++ ER +L
Sbjct: 245 DVNERIAGIEEEKRTLQRQVATQANER---SALHSDLSAVNETAQNIEREREEL 295


>SB_12952| Best HMM Match : Peptidase_M50 (HMM E-Value=8.9e-07)
          Length = 413

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 206 RRXSPFLLLFYWHCFFVISPVLFNFATVS 120
           R  S +L++F+W   F+++ VL N+   S
Sbjct: 3   RSSSIYLVIFFWTLVFIVNAVLKNYRKYS 31


>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 594

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/84 (21%), Positives = 32/84 (38%)
 Frame = +3

Query: 222 YRQGDVKCGWGVLACLCLARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVS 401
           Y     +  W    C C  R  PAE     +   N     D+N  L++I    +V +  S
Sbjct: 21  YNNNTQEYRWNKKYCACFKRAGPAESPCCNIEQGN--DLLDSNWTLSTINTLPKVTQKYS 78

Query: 402 AVQAKQTRRLDAIQDKLDRVETTL 473
               +  ++ +++ + L     TL
Sbjct: 79  HTDEQMGQQQESLNNSLQNKMNTL 102


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,365,483
Number of Sequences: 59808
Number of extensions: 357238
Number of successful extensions: 1057
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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