BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0145 (537 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g43880.1 68414.m05055 hypothetical protein low similarity to ... 31 0.49 At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 30 1.1 At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 30 1.1 At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 29 2.0 At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 2.0 At5g62000.3 68418.m07784 transcriptional factor B3 family protei... 29 2.6 At5g62000.2 68418.m07783 transcriptional factor B3 family protei... 29 2.6 At5g62000.1 68418.m07782 transcriptional factor B3 family protei... 29 2.6 At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 28 3.4 At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 28 3.4 At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-relate... 28 4.5 At4g39150.1 68417.m05545 DNAJ heat shock N-terminal domain-conta... 27 6.0 At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 6.0 At1g12790.1 68414.m01485 expressed protein 27 6.0 At5g28810.1 68418.m03542 hypothetical protein 27 7.9 At3g19700.1 68416.m02495 leucine-rich repeat transmembrane prote... 27 7.9 At2g20010.1 68415.m02339 expressed protein 27 7.9 >At1g43880.1 68414.m05055 hypothetical protein low similarity to protective antigen [Streptococcus pyogenes] GI:8996050, fibrinogen-binding protein [Streptococcus equi] GI:3093478 Length = 409 Score = 31.1 bits (67), Expect = 0.49 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Frame = +3 Query: 282 TSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE--TVSAVQAKQTRRLDAIQDKLD 455 TS A+ V+ + + +LA ++E+ + TV VQA + A+ D++ Sbjct: 257 TSTAQGAKKAVHDVKVELAAAYSKLLAGVKEKWVAKKEYTVLEVQAAEVETNLALIDQIT 316 Query: 456 RVETTLSLKLERVQLAAEDLEHR 524 +V L+++ R+Q +DLE R Sbjct: 317 KVAIDLTVEKPRLQAELDDLEAR 339 >At1g79670.2 68414.m09292 wall-associated kinase, putative similar to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]; isoform contains non-consensus AT-acceptor splice site. Length = 714 Score = 29.9 bits (64), Expect = 1.1 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 348 NSILASIEERLR---VLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLE 518 N +L ++ R++ LE V AV AK RR +++ K +S++LER++ + EDLE Sbjct: 607 NRVLDIVDSRIKEGCTLEQVLAV-AKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLE 665 >At1g79670.1 68414.m09291 wall-associated kinase, putative similar to wall-associated kinase 4 GI:3355308 from [Arabidopsis thaliana]; isoform contains non-consensus AT-acceptor splice site. Length = 751 Score = 29.9 bits (64), Expect = 1.1 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 348 NSILASIEERLR---VLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLE 518 N +L ++ R++ LE V AV AK RR +++ K +S++LER++ + EDLE Sbjct: 644 NRVLDIVDSRIKEGCTLEQVLAV-AKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLE 702 >At5g67470.1 68418.m08507 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 899 Score = 29.1 bits (62), Expect = 2.0 Identities = 20/80 (25%), Positives = 33/80 (41%) Frame = +3 Query: 282 TSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRV 461 TSP+ + SP T + + NS+ A E+ +T + + D ++ DR Sbjct: 418 TSPSRKQAFKTPSPKTKAVEEVNSVSAGSLEKSGDGDTDPSKPKLKPLHWDKVRASSDRA 477 Query: 462 ETTLSLKLERVQLAAEDLEH 521 LK QL + +EH Sbjct: 478 TVWDQLKSSSFQLNEDRMEH 497 >At5g16730.1 68418.m01959 expressed protein weak similarity to microtubule binding protein D-CLIP-190 [Drosophila melanogaster] GI:2773363, SMC2-like condensin [Arabidopsis thaliana] GI:14279543 Length = 853 Score = 29.1 bits (62), Expect = 2.0 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = +3 Query: 342 DTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLE 518 DT + + ++ER+ LET AKQ L+ + +L VE +S + V+ +LE Sbjct: 363 DTETEITDLKERIVTLET---TVAKQKEDLEVSEQRLGSVEEEVSKNEKEVEKLKSELE 418 >At5g62000.3 68418.m07784 transcriptional factor B3 family protein / auxin-responsive factor, putative (ARF1) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA ARF1 (auxin response factor) binding protein GI:2245393 Length = 859 Score = 28.7 bits (61), Expect = 2.6 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = -3 Query: 352 LFVSVELCVFGE*TRRL*GSAGEVRAKQRHASTPQPHLTSPCL*GYSRHVDXAXSCYCFI 173 +FVS + V G+ L G GE+R R A Q ++ S + +S H+ + + I Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294 Query: 172 --GTVFLLFHRYYLTSRRFL 119 GT+F ++++ + F+ Sbjct: 295 STGTMFTVYYKPRTSPSEFI 314 >At5g62000.2 68418.m07783 transcriptional factor B3 family protein / auxin-responsive factor, putative (ARF1) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA ARF1 (auxin response factor) binding protein GI:2245393 Length = 859 Score = 28.7 bits (61), Expect = 2.6 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = -3 Query: 352 LFVSVELCVFGE*TRRL*GSAGEVRAKQRHASTPQPHLTSPCL*GYSRHVDXAXSCYCFI 173 +FVS + V G+ L G GE+R R A Q ++ S + +S H+ + + I Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294 Query: 172 --GTVFLLFHRYYLTSRRFL 119 GT+F ++++ + F+ Sbjct: 295 STGTMFTVYYKPRTSPSEFI 314 >At5g62000.1 68418.m07782 transcriptional factor B3 family protein / auxin-responsive factor, putative (ARF1) contains Pfam profile: PF02362 B3 DNA binding domain; identical to cDNA ARF1 (auxin response factor) binding protein GI:2245393 Length = 859 Score = 28.7 bits (61), Expect = 2.6 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = -3 Query: 352 LFVSVELCVFGE*TRRL*GSAGEVRAKQRHASTPQPHLTSPCL*GYSRHVDXAXSCYCFI 173 +FVS + V G+ L G GE+R R A Q ++ S + +S H+ + + I Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294 Query: 172 --GTVFLLFHRYYLTSRRFL 119 GT+F ++++ + F+ Sbjct: 295 STGTMFTVYYKPRTSPSEFI 314 >At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing protein contains Pfam profile PF01465: GRIP domain; supporting cDNA gi|20303028|gb|AF499634.1| Length = 765 Score = 28.3 bits (60), Expect = 3.4 Identities = 15/61 (24%), Positives = 34/61 (55%) Frame = +3 Query: 354 ILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLSH 533 ++ ++ ER + ET+S++Q + + K+ +E + + R++ AAE L+ L+H Sbjct: 300 VVDALSERDKAAETISSLQVLLAEK----ESKIAEMEAAATGEAARLRAAAETLKGELAH 355 Query: 534 V 536 + Sbjct: 356 L 356 >At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing protein contains Pfam profile PF01465: GRIP domain; supporting cDNA gi|20303028|gb|AF499634.1| Length = 788 Score = 28.3 bits (60), Expect = 3.4 Identities = 15/61 (24%), Positives = 34/61 (55%) Frame = +3 Query: 354 ILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAEDLEHRLSH 533 ++ ++ ER + ET+S++Q + + K+ +E + + R++ AAE L+ L+H Sbjct: 300 VVDALSERDKAAETISSLQVLLAEK----ESKIAEMEAAATGEAARLRAAAETLKGELAH 355 Query: 534 V 536 + Sbjct: 356 L 356 >At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-related similar to cyclopropane synthase [Sterculia foetida] GI:21069167 Length = 513 Score = 27.9 bits (59), Expect = 4.5 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 213 EYPYRQGDVKCGWGVLACLCLART 284 E PY ++ CGWG LA + RT Sbjct: 217 EEPYEVLEIGCGWGTLAIEVVKRT 240 >At4g39150.1 68417.m05545 DNAJ heat shock N-terminal domain-containing protein similar to SP|P39101 CAJ1 protein, Saccharomyces cerevisiae, PIR2:S48085; contains Pfam profile PF00226 DnaJ domain Length = 345 Score = 27.5 bits (58), Expect = 6.0 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 360 ASIEERLRVLETVSAVQAKQTRRLDAIQ-DKLDRVETTLSLKLE 488 ASI+ L E Q Q ++ AIQ D++D++ TTL +KLE Sbjct: 109 ASIDAELESYEPEIRKQMLQ-EKIKAIQKDRVDKLVTTLKIKLE 151 >At2g15880.1 68415.m01820 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 727 Score = 27.5 bits (58), Expect = 6.0 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -1 Query: 333 CAYLVSRHEDCKARPVRCAPNKGTPAR-PSHT*HRPVYRDIP 211 CA ++SR DC ++ TP++ PS RPV++ P Sbjct: 370 CAVVISRPVDCSKDKCAGGSSQATPSKSPSPVPTRPVHKPQP 411 >At1g12790.1 68414.m01485 expressed protein Length = 250 Score = 27.5 bits (58), Expect = 6.0 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +1 Query: 241 SVAGACWRAFVWRAPHRPSLTIFVSTHQIRTALRIQ-IAF*PALKSGC 381 +VAG C + W+ PSL F+S + R+ ++ P L C Sbjct: 25 NVAGVCIMSNAWKVEQEPSLINFISAFLSANSFRLNFVSIPPDLIFNC 72 >At5g28810.1 68418.m03542 hypothetical protein Length = 560 Score = 27.1 bits (57), Expect = 7.9 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +3 Query: 291 AEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE-TVSAVQAKQTRRLDAIQDKLDRVET 467 AE + + + H + + + L I L + TVS + + RLD +Q K+ +E Sbjct: 308 AEVSHKKQRTGKAHVNEEEKTSLLDIWNMLEKMNVTVSDIDKNASSRLDGLQKKVTCLEA 367 Query: 468 TLSLKLERVQ 497 ++ + E V+ Sbjct: 368 SVKTRFEAVE 377 >At3g19700.1 68416.m02495 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich receptor-like protein kinase GB:AAC36318 from [Malus domestica]; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 991 Score = 27.1 bits (57), Expect = 7.9 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +3 Query: 225 RQGDVKCGWGVLACLCLARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLE--TV 398 R+G+ + GW V L L E + + P H +++IL E R R+ + Sbjct: 777 RRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLA 836 Query: 399 SAVQAKQTRR 428 +QA +R Sbjct: 837 KIIQADSVQR 846 >At2g20010.1 68415.m02339 expressed protein Length = 834 Score = 27.1 bits (57), Expect = 7.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 297 PYNLRVYSPNTHSSTDTNSILASIEERLRVLETV 398 P NLR+Y S D N L +EE VLE + Sbjct: 136 PLNLRIYQMLLESCFDVNDELLIVEEVDEVLELI 169 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,844,880 Number of Sequences: 28952 Number of extensions: 212596 Number of successful extensions: 566 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 557 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 566 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 993966856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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