BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0142 (501 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 27 0.083 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 27 0.11 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 1.8 AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 21 7.2 U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 9.5 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.5 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 27.5 bits (58), Expect = 0.083 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -1 Query: 132 LPELSSDLVAALTSLDMYDFPHFVLFM*TINY--LTLKMLSARSTH 1 L E + +L AL+S++ F HFVL M IN+ +T ++ AR H Sbjct: 870 LVEFALELKKALSSINEQSFNHFVLKM-GINHGPVTAGVIGARKPH 914 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 27.1 bits (57), Expect = 0.11 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 193 QLERINVYYNEASGGKYVPRASSSTWSPAPWTMSLWTFRTDLPSG 327 QL+R ++ +N G+ PR+ +++ SPA S T P G Sbjct: 720 QLKRTDIIHNYIMRGEASPRSPNASPSPAEQCASTTTITARSPQG 764 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 23.0 bits (47), Expect = 1.8 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = +1 Query: 253 ASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAEL 402 AS +TWSPA +L R+ S Q P T EG EL Sbjct: 515 ASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIEL 564 >AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. Length = 104 Score = 21.0 bits (42), Expect = 7.2 Identities = 9/33 (27%), Positives = 15/33 (45%) Frame = +2 Query: 194 SWSASMYTTMKPPAASTCPAHPRRLGARHHGLC 292 SW + + A C A R+ G+ +G+C Sbjct: 68 SWQSKWLSINHSACAIRCLAQRRKGGSCRNGVC 100 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 20.6 bits (41), Expect = 9.5 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -1 Query: 258 GCAGHVLAAGGFIVVYIDALQLQVRVP 178 G G V A G +VVYI +R P Sbjct: 60 GMLGFVSAMGNGMVVYIFLSTKSLRTP 86 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 20.6 bits (41), Expect = 9.5 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +1 Query: 181 DSDLQLERINVYYNEASGGKYV 246 D+ L+ I Y N+ GG++V Sbjct: 72 DARLKFSNIAPYLNQIYGGQFV 93 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 139,405 Number of Sequences: 438 Number of extensions: 2849 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 13741392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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