Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0142
(501 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 146 1e-35
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 144 3e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 143 7e-35
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 142 1e-34
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 142 1e-34
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 141 2e-34
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 140 4e-34
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 138 3e-33
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 137 3e-33
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 70 8e-13
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 69 2e-12
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 69 2e-12
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 66 1e-11
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 66 1e-11
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 64 7e-11
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 64 7e-11
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 58 3e-09
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 58 3e-09
At4g37190.1 68417.m05265 expressed protein 31 0.44
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 29 1.3
At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to... 28 4.1
At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to... 28 4.1
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 4.1
At4g31660.1 68417.m04496 transcriptional factor B3 family protei... 27 5.4
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 5.4
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 7.1
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 27 7.1
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 9.4
At1g73080.1 68414.m08450 leucine-rich repeat transmembrane prote... 27 9.4
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 9.4
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 146 bits (353), Expect = 1e-35
Identities = 78/128 (60%), Positives = 91/128 (71%), Gaps = 6/128 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 VPRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVD 408
VPRA P TM + R+ P GQ+ P +G AKGHYTEGAEL+D
Sbjct: 61 VPRAVLMDLEPG--TMD--SIRSG-PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 115
Query: 409 SV*HVVSK 432
+V VV K
Sbjct: 116 AVLDVVRK 123
Score = 60.1 bits (139), Expect = 8e-10
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGFQL 472
RSGP+GQI+RPDNFV Q G T + RKEAE+CDCLQGFQ+
Sbjct: 78 RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV-VRKEAENCDCLQGFQV 136
Query: 473 THS 481
HS
Sbjct: 137 CHS 139
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (349), Expect = 3e-35
Identities = 77/127 (60%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + RT P GQ+ P +G AKGHYTEGAEL+D+
Sbjct: 61 PRAILMDLEPG--TMD--SVRTG-PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGFQL 472
R+GP+GQI+RPDNFV Q G T + RKEAE+CDCLQGFQ+
Sbjct: 77 RTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV-VRKEAENCDCLQGFQV 135
Query: 473 THS 481
HS
Sbjct: 136 CHS 138
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 143 bits (346), Expect = 7e-35
Identities = 79/127 (62%), Positives = 88/127 (69%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ+ P +G AKGHYTEGAEL+DS
Sbjct: 61 PRAVLMDLEPG--TMD--SLRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGPFGQI+RPDNFV Q G T +++S + RKEAE+ DCLQGF
Sbjct: 77 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV---VRKEAENSDCLQGF 133
Query: 467 QLTHS 481
Q+ HS
Sbjct: 134 QVCHS 138
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 78/127 (61%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ P +G AKGHYTEGAEL+DS
Sbjct: 61 PRAVLMDLEPG--TMD--SLRSG-PYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 59.3 bits (137), Expect = 1e-09
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGP+GQ +RPDNFV Q G T +++S + RKEAE+CDCLQGF
Sbjct: 77 RSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV---VRKEAENCDCLQGF 133
Query: 467 QLTHS 481
Q+ HS
Sbjct: 134 QVCHS 138
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 78/127 (61%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ P +G AKGHYTEGAEL+DS
Sbjct: 61 PRAVLMDLEPG--TMD--SLRSG-PYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 59.3 bits (137), Expect = 1e-09
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGP+GQ +RPDNFV Q G T +++S + RKEAE+CDCLQGF
Sbjct: 77 RSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV---VRKEAENCDCLQGF 133
Query: 467 QLTHS 481
Q+ HS
Sbjct: 134 QVCHS 138
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 141 bits (342), Expect = 2e-34
Identities = 78/128 (60%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 243
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 VPRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVD 408
VPRA P TM + R+ P GQ+ P +G AKGHYTEGAEL+D
Sbjct: 61 VPRAVLMDLEPG--TMD--SIRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 115
Query: 409 SV*HVVSK 432
+V VV K
Sbjct: 116 AVLDVVRK 123
Score = 61.3 bits (142), Expect = 4e-10
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTRRVLNSSIQXNTSFRKEAESCDCLQGFQL 472
RSGPFGQI+RPDNFV Q G T + RKEAE+CDCLQGFQ+
Sbjct: 78 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV-VRKEAENCDCLQGFQV 136
Query: 473 THS 481
HS
Sbjct: 137 CHS 139
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 140 bits (340), Expect = 4e-34
Identities = 78/127 (61%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ+ P +G AKGHYTEGAEL+DS
Sbjct: 61 PRAVLMDLEPG--TMD--SLRSG-PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGPFGQI+RPDNFV Q G T +++S + RKEAE+CDCLQGF
Sbjct: 77 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV---VRKEAENCDCLQGF 133
Query: 467 QLTHS 481
Q+ HS
Sbjct: 134 QVCHS 138
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 138 bits (333), Expect = 3e-33
Identities = 75/127 (59%), Positives = 88/127 (69%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ+ P +G AKGHYTEGAEL+DS
Sbjct: 61 PRAVLMDLEPG--TMD--SVRSG-PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 61.3 bits (142), Expect = 4e-10
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGP+GQI+RPDNFV Q G T +++S + RKEAE+CDCLQGF
Sbjct: 77 RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV---VRKEAENCDCLQGF 133
Query: 467 QLTHS 481
Q+ HS
Sbjct: 134 QVCHS 138
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 137 bits (332), Expect = 3e-33
Identities = 74/127 (58%), Positives = 87/127 (68%), Gaps = 5/127 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 PRASSSTWSPAPWTMSLWTFRTDLPSGQLRXPTVRAPATTG-----AKGHYTEGAELVDS 411
PRA P TM + R+ P GQ+ P +G AKGHYTEGAEL+DS
Sbjct: 61 PRAVLMDLEPG--TMD--SVRSG-PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 412 V*HVVSK 432
V VV K
Sbjct: 116 VLDVVRK 122
Score = 61.3 bits (142), Expect = 4e-10
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 RSGPFGQIYRPDNFVXRQYGRRQQLGPRDTTR--RVLNSSIQXNTSFRKEAESCDCLQGF 466
RSGP+GQI+RPDNFV Q G T +++S + RKEAE+CDCLQGF
Sbjct: 77 RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV---VRKEAENCDCLQGF 133
Query: 467 QLTHS 481
Q+ HS
Sbjct: 134 QVCHS 138
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.1 bits (164), Expect = 8e-13
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVDS 411
+VPRA P + T+R QL A A A+GHYT G E+VD+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTVGREIVDT 117
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 68.9 bits (161), Expect = 2e-12
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R QL A A A+GHYT G E+VD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTVGKEIVD 116
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 68.9 bits (161), Expect = 2e-12
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R QL A A A+GHYT G E+VD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTVGKEIVD 116
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 66.1 bits (154), Expect = 1e-11
Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R QL A A A+GHYT G E+VD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTIGKEIVD 116
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 66.1 bits (154), Expect = 1e-11
Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R QL A A A+GHYT G E+VD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTIGKEIVD 116
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 63.7 bits (148), Expect = 7e-11
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R QL A A A+GHYT G E+VD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTIGKEIVD 116
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 63.7 bits (148), Expect = 7e-11
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPW-TMSLWTFRTDLPSGQLRXPTVRAPATTGAKGHYTEGAELVD 408
+VPRA P + T+R QL A A A+GHYT G E+VD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDA-ANNFARGHYTIGKEIVD 116
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.1 bits (67), Expect = 0.44
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 234
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 235 GKYVPRASSSTWSPAPWTMS 294
Y PR S A TMS
Sbjct: 61 ATYTPRLVSVNLKGALGTMS 80
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -1
Query: 270 PSRRGCAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 97
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 96 ------TSLDMYDFPHFVL 58
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 305
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPRRLGARHHGLCRSG 301
MGTL C A + T K P S +HP+ ARH+ +G
Sbjct: 78 MGTLICIMGAMLLTFYKGPELSNPHSHPQ---ARHNNNNNNG 116
>At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPRRLGARHHGLCRSG 301
MGTL C A + T K P S +HP+ ARH+ +G
Sbjct: 138 MGTLICIMGAMLLTFYKGPELSNPHSHPQ---ARHNNNNNNG 176
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 4.1
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 237 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At4g31660.1 68417.m04496 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424; contains
Pfam profile PF02362: B3 DNA binding domain
Length = 251
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 474 VSWNPWRQSHDSASFR-NDVLX*IDEFSTL-RVVSLGPSCCRRPY 346
V W + +HD FR D++ E S + V +LGPSCC Y
Sbjct: 68 VGWKEFASAHD---FRVGDIIVFRHEGSLVFHVTALGPSCCEIQY 109
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 88 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 180
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 428 RKEAESCDCLQGFQLTHS 481
RKEAE+C+CLQ F ++ S
Sbjct: 9 RKEAENCNCLQVFFVSGS 26
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 115 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
G + W I+ + TG Y DL ER+++ +++A +Y P
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKP 89
>At1g73080.1 68414.m08450 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
GI:1389566 from [Arabidopsis thaliana]
Length = 1123
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 228 LRRQVRAPRILVD--LEPGTMDYVALDLSDRSTVRTTSYXDSTG 353
+ R ++ IL+D LEP D+ L D STV T + +TG
Sbjct: 951 VHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVTGTTG 994
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 167 PVGSMPCSSEMISQNLAPIW 108
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,032,436
Number of Sequences: 28952
Number of extensions: 231774
Number of successful extensions: 750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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