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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0139
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0648 + 16563147-16565557,16565655-16565850                       64   2e-10
03_02_0662 - 10250235-10250433,10250692-10253105                       59   3e-09
12_02_0820 + 23437811-23440230,23440336-23440534                       57   2e-08
08_02_0292 - 15420378-15421229                                         33   0.33 
06_03_1007 + 26869731-26870429,26871262-26871387                       33   0.33 
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911...    31   1.00 
03_02_0383 + 7966929-7968951,7969085-7969104                           31   1.3  
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283...    29   5.3  
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516...    28   9.3  
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558...    28   9.3  
03_01_0074 + 610948-611184,611745-611867,611983-612082,612167-61...    28   9.3  
01_07_0251 + 42289617-42291241,42291424-42292156                       28   9.3  

>05_03_0648 + 16563147-16565557,16565655-16565850
          Length = 868

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASN--AQVDHNDYDMV 175
           ++L +  ++RSVKP I S FGDIAL+IG +F KY    M ML  A+   A +DH D DMV
Sbjct: 696 KDLSNSMLNRSVKPPIFSCFGDIALAIGDNFEKYLPYAMPMLQGAAELLAVLDHTDEDMV 755

Query: 176 EYLGELR 196
           +Y  +LR
Sbjct: 756 DYGNQLR 762



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 196 RKVLEAYTGIIQGLKGVGSQ 255
           R + EAY+GI+QG+KG  +Q
Sbjct: 763 RGIFEAYSGILQGIKGAKAQ 782


>03_02_0662 - 10250235-10250433,10250692-10253105
          Length = 870

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNA--QVDHNDYDMV 175
           ++L  P +HRSVKP ILS  GDIAL++G  F KY    M ML  A+    ++D  D D +
Sbjct: 696 KDLSSPELHRSVKPPILSCIGDIALTMGEHFEKYVPYTMPMLQGAAELCFRMDAPDDDSI 755

Query: 176 EYLGEL-RERF--WKHTLESFKALK 241
           EY  EL R  F  +   L+ FK  K
Sbjct: 756 EYQNELSRSIFEAYSGILQGFKNSK 780


>12_02_0820 + 23437811-23440230,23440336-23440534
          Length = 872

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQAS--NAQVDHNDYDMV 175
           ++L    +HRSVKP I S FGDIAL+IG +F KY    M ML  A+  +A     D +M+
Sbjct: 698 KDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLIYAMPMLQSAADLSAHAAAADDEML 757

Query: 176 EYLGELR 196
           +Y  +LR
Sbjct: 758 DYTNQLR 764



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = +1

Query: 202 VLEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQVANEEDRTDAQDGGHIGXHGA 381
           +LEAY+GI+QG K       +T L   +    I+NF+  + N +D  D      IG  G 
Sbjct: 767 ILEAYSGILQGFK----SSPKTQL-LMQYAPNILNFLDALYNGKDMDDTVMKTAIGVLG- 820

Query: 382 TLLNAFGAH 408
            L +  G H
Sbjct: 821 DLADTLGVH 829


>08_02_0292 - 15420378-15421229
          Length = 283

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 445 RHAARLAPAASPRGRRNQRTLPXXGRTKKRMRSRQSR 555
           R   R + AA P GRR + T    GR+++R R+R+ R
Sbjct: 18  RERRRGSAAAEPSGRRRELTTSGGGRSRRRSRTRRRR 54


>06_03_1007 + 26869731-26870429,26871262-26871387
          Length = 274

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 395 RSGRTCLPHARHQSRFTDMLQGWRRRLPRVGGATKERFPIXGEPKREC 538
           R GR   P A  + R   +L+GW +R+    GA + R    G   R C
Sbjct: 92  RRGRRRRPRAAARPRAEVVLEGWGKRMGLAAGAARRRAAAAGRALRAC 139


>01_06_1171 -
           35089719-35090336,35090596-35090715,35090851-35091108,
           35091934-35092563
          Length = 541

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 662 GIFTPASNVWFSXLAFLKCLLXRXNSKIQLGKEGR 558
           G+ TP SNVW   +  L+ +  R N  ++  KE R
Sbjct: 349 GVLTPKSNVWCFGVVLLELITGRKNLDVRSSKEER 383


>03_02_0383 + 7966929-7968951,7969085-7969104
          Length = 680

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/42 (45%), Positives = 20/42 (47%)
 Frame = -3

Query: 533 LFLVRPKXGSVLWLRRPRGEAAGANLAACR*TGFGVEHGAST 408
           L LV    G  +WLRR R   AGA   A    G GV  GA T
Sbjct: 51  LVLVALGLGLFVWLRRGRKRGAGAGGGAAARMGVGVGVGART 92


>04_03_1028 -
           21827961-21827972,21828018-21828112,21828286-21828361,
           21828921-21829037,21829532-21829621,21830011-21830056,
           21831407-21831502,21831599-21832008
          Length = 313

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 424 STPKPVHRHAARLAPAASP--RGRRNQRTLPXXGRTKKRMRSR 546
           S   P+     RL+P  SP  R  R++   P  GR++ R RSR
Sbjct: 41  SPSPPLPPRKRRLSPTPSPTRRSSRSRSRSPRRGRSRSRSRSR 83


>09_04_0076 + 14350020-14350164,14351020-14351129,14351436-14351601,
            14351740-14351840,14351960-14352032,14352111-14352252,
            14353239-14353399,14354017-14354129,14354226-14354325,
            14354580-14354676,14354798-14354849,14355074-14355175,
            14355256-14355402,14355485-14355656,14355752-14355991,
            14356565-14356621,14356853-14356942,14357089-14357284,
            14358117-14358228,14358305-14358459,14359155-14360580,
            14360663-14360857,14361214-14361684
          Length = 1540

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 591  KFQNSAWQRGKGSALTRTHSLFGSPXXGKRSLVAPP 484
            K + +  Q G G  +TRT SL G+P    ++ + PP
Sbjct: 1092 KLKEATKQLGLGPPITRTRSLSGTPQELNQAPMQPP 1127


>06_03_1340 +
           29455210-29455290,29455493-29455571,29455767-29455814,
           29455908-29455931,29456433-29456615,29456730-29456805,
           29456937-29457072
          Length = 208

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +1

Query: 178 IFG*TPRKVLEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQ 318
           +FG T  K  E +  I  G KG+G      S   +   R I  FMIQ
Sbjct: 60  LFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGFMIQ 106


>03_01_0074 +
           610948-611184,611745-611867,611983-612082,612167-612213,
           612292-612450,613033-613132,613209-613300,613390-614532,
           614949-615041,615408-615493,615746-615873,615965-616086,
           616202-616270,616380-616518,616624-616686,616887-616930,
           617339-617425
          Length = 943

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 612 KMLVGPXKFQNSAWQRGKGSALTRTHSLFG 523
           K  VGP K+QN   +  K SA+  +HSL G
Sbjct: 670 KTTVGPNKYQNLGSRTEKDSAVRFSHSLPG 699


>01_07_0251 + 42289617-42291241,42291424-42292156
          Length = 785

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +1

Query: 388 LNAFGAHVLAPCSTPK---PVHRHAARLAPAAS 477
           L+AF  H+L  C++ +    VH H AR  PAAS
Sbjct: 10  LDAFYLHLLRACTSLRHAAAVHAHIARAHPAAS 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,076,024
Number of Sequences: 37544
Number of extensions: 429219
Number of successful extensions: 1343
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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