Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0139
(760 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g53480.1 68418.m06646 importin beta-2, putative similar to im... 58 5e-09
At5g59700.1 68418.m07484 protein kinase, putative similar to rec... 35 0.051
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno... 30 1.5
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha... 30 1.9
At3g08760.1 68416.m01018 protein kinase family protein contains ... 29 2.5
At4g04930.1 68417.m00717 fatty acid desaturase family protein si... 29 4.4
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 28 5.9
At3g13060.2 68416.m01628 expressed protein contains Pfam profile... 28 7.7
At3g13060.1 68416.m01627 expressed protein contains Pfam profile... 28 7.7
>At5g53480.1 68418.m06646 importin beta-2, putative similar to
importin-beta2 [Oryza sativa (japonica cultivar-group)]
GI:3983665; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 870
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 ENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQAS--NAQVDHNDYDMV 175
++L +HRSVKP I S FGDIAL+IG DF KY+ M ML A+ +A D +M
Sbjct: 696 KDLSSNQLHRSVKPPIFSCFGDIALAIGEDFDKYWRYSMPMLQSAAELSAHSAGADDEMT 755
Query: 176 EYLGELR 196
EY LR
Sbjct: 756 EYTNSLR 762
>At5g59700.1 68418.m07484 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 829
Score = 35.1 bits (77), Expect = 0.051
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +2
Query: 2 ENLGDPSIHRSVKPEILSVFGDIALSIGSDFG----KYFDVV--MQMLLQASNAQVDHND 163
E++ DPS+ ++P+ L FG+ +D+G DV+ ++ LQ A VD +
Sbjct: 708 EHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVDGDP 767
Query: 164 YDMVEYLGELRERF 205
D +GEL RF
Sbjct: 768 EDSTNMIGELPLRF 781
>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
immunophilin identical to immunophilin (GI:2104957)
[Arabidopsis thaliana]
Length = 112
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 462 GAGGFPAWAAQPKNASXF 515
GAGGFPAW QP + F
Sbjct: 87 GAGGFPAWGIQPNSVLDF 104
>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
chain-related similar to SP|Q61704 Inter-alpha-trypsin
inhibitor heavy chain H3 precursor {Mus musculus};
contains Pfam profile PF00092: von Willebrand factor
type A domain
Length = 754
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 490 AAHAGKPPAPT-LQHVGEPALVSS-MGQARAPRTRLVKSPHXPRYDRHLGRRCGP 332
A A +PPAP +P L ++ M A P +V +P P Y H+ RC P
Sbjct: 26 AVAAPRPPAPMDRSSTTQPYLPTAPMVYAVIPDPGIVDNPDLPSYQPHVHGRCDP 80
>At3g08760.1 68416.m01018 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 662 GIFTPASNVWFSXLAFLKCLLXRXNSKIQLGKEGRVLL 549
G+ TP SNVW + L+ L R N KE R L+
Sbjct: 357 GLLTPKSNVWSYGIVLLEMLTGRKNMDGSYPKEERNLV 394
>At4g04930.1 68417.m00717 fatty acid desaturase family protein
similar to D. melanogaster Des-1 protein, GenBank
accession number X94180; contains Pfam profile PF00487
Fatty acid desaturase domain
Length = 332
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 26 HRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHN 160
H S + +ILS + I G D + + + ++LQ S A + HN
Sbjct: 33 HASRRRQILSCYPQIRQLFGPDPWAFLKITLVVILQLSTAAILHN 77
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 178 IFG*TPRKVLEAYTGIIQGLKGVGSQYDRTSLSSSRTCRAIVNFMIQ 318
+FG T K +E + + G KG+G S R I +FM+Q
Sbjct: 55 LFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQ 101
>At3g13060.2 68416.m01628 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 634
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 397 FGAHVLAPCSTPKPVHRHAARLAPAASPR 483
F + + S P +HRH++ ++PA SP+
Sbjct: 227 FDGGIWSDWSKPSDMHRHSSSISPALSPQ 255
>At3g13060.1 68416.m01627 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 551
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 397 FGAHVLAPCSTPKPVHRHAARLAPAASPR 483
F + + S P +HRH++ ++PA SP+
Sbjct: 227 FDGGIWSDWSKPSDMHRHSSSISPALSPQ 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,757,643
Number of Sequences: 28952
Number of extensions: 318998
Number of successful extensions: 845
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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