BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0132 (646 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 26 0.36 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.8 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.7 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 25.8 bits (54), Expect = 0.36 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 175 YMDNTMTS*GCL-SMVASLRSPTISSSELCGPWQAVV 282 Y+D T+T+ + S+V+++R ++ SSEL W A + Sbjct: 407 YVDITVTTDASVPSLVSNVRITSVKSSELSISWDAPI 443 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 21.8 bits (44), Expect = 5.8 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 321 IPRISFFYAETTSVP----ASIGFMGFTMSAKGGITLNYGRRSQTASTVF 458 I R + +Y VP AS+ +GFT+ G L+ G + TVF Sbjct: 227 IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVF 276 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.4 bits (43), Expect = 7.7 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +3 Query: 243 LFLGTMWTVASSRWKQYACSS 305 L L W+V + W +CSS Sbjct: 401 LLLDADWSVNAGMWMWLSCSS 421 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 198,765 Number of Sequences: 438 Number of extensions: 4551 Number of successful extensions: 7 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19438227 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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