Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0129
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09) 73 2e-13
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 58 5e-09
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 32 0.39
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 32 0.39
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 32 0.39
SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08) 32 0.51
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_57618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_38969| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_22989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 28 8.4
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 28 8.4
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 28 8.4
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 28 8.4
SB_20632| Best HMM Match : Cu_bind_like (HMM E-Value=0.51) 28 8.4
>SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09)
Length = 402
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Frame = +2
Query: 266 AYNSGYPGQAAYGGMPPGQ--LEIG-HGP----YP---SIGVGGT---ITPQVQQWFRAV 406
+YN GY G YG P G + G +GP YP S GG + P + QWF+AV
Sbjct: 51 SYNPGYGGHQGYGQQPHGYGGQQYGQYGPPPSAYPGQFSAPTGGPPPGVDPSLWQWFQAV 110
Query: 407 DKDQSGFITSTELRSALVNAQGQTFSETACNSDDGMFDKD 526
D+D++G IT++ELR+ALVN+ F+E C GMFDKD
Sbjct: 111 DQDRTGKITASELRAALVNSNWSQFNEETCRMMIGMFDKD 150
>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 622
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 278 GYPGQAAYGGMPPGQLEIGHGPYPSIGVGGT--ITPQVQQWFRAVDKDQSGFITSTELRS 451
GYP Q PPG G+G PS G P + WF AVD+D+SG I+S EL
Sbjct: 427 GYPPQQP--SYPPG----GYGGPPSAPYGAPPGADPTLWNWFIAVDRDRSGAISSDELEQ 480
Query: 452 ALVNAQGQTFSETACNSDDGMFDKDRNG 535
AL+N F++ C G+FD D++G
Sbjct: 481 ALMNNNWSRFNQETCRLMIGLFDHDQSG 508
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 383 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNSDDGMFDKDRNG 535
++Q FR D++ G+I++ ELR A V G ++ GM D+D +G
Sbjct: 219 LRQAFRVFDRNGDGYISAEELRVA-VTTLGDALTQDEAEELIGMLDQDGDG 268
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 380 QVQQWFRAVDKDQSGFITSTELRSALVN 463
++++ FR DKD +GFI++ ELR + N
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTN 101
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 380 QVQQWFRAVDKDQSGFITSTELRSALVN 463
++++ FR DKD +GFI++ ELR + N
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTN 101
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 380 QVQQWFRAVDKDQSGFITSTELRSALVN 463
++++ FR DKD +GFI++ ELR + N
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTN 112
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 380 QVQQWFRAVDKDQSGFITSTELRSALVN 463
++++ FR DKD +GFI++ ELR + N
Sbjct: 49 EIREAFRVFDKDGNGFISAAELRHVMTN 76
>SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08)
Length = 103
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 407 DKDQSGFITSTELRSALVNAQGQTFSETACNSDDGMFDKDRNG 535
D+D SG+I+ ELR + ++ G+ SE MFDK+++G
Sbjct: 4 DRDGSGYISPEELRYVVCHS-GEKLSEDEARELIDMFDKNKDG 45
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 404 VDKDQSGFITSTELRSALVNAQGQTFSETACNSDDGMFDKDRNG 535
VD D+ GF+T ELR L+N + +T NS D +++G
Sbjct: 567 VDLDKDGFVTEDELRLRLLNT-SRKHRKTEVNSTVTFHDDNKDG 609
>SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 386 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNSDDGMFD 520
+ +F DKD+ GFI EL AL + Q+ + N+ GM +
Sbjct: 315 RHYFTKNDKDKDGFINHRELLKALRDLYAQSITVEQVNAILGMLE 359
>SB_57618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 96 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 143
>SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 917 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 964
>SB_38969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 32 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 79
>SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 470 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 517
>SB_22989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 66 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 113
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 176 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 223
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 374 TPQVQQWFRAVDKDQSGFITSTELRSAL 457
T +++ F+++DKD GFIT +L+ +
Sbjct: 72 TQEIRMAFKSMDKDGDGFITFGDLKKTM 99
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +2
Query: 371 ITPQVQQWFRAVDKDQSGFITSTELRSAL 457
+T ++++ F+ +D+D SG+I E+ +AL
Sbjct: 66 VTLRLEKIFQEIDEDNSGYIDHNEISNAL 94
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 251 RALQMAYNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQ 382
+A + +SG+ GQ G P GQ HG G+GG + Q
Sbjct: 611 QAAPTSQSSGFGGQGGMFGTPGGQQSGFHGGIGGGGMGGGFSGQ 654
>SB_20632| Best HMM Match : Cu_bind_like (HMM E-Value=0.51)
Length = 388
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 457
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 176 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 223
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,803,796
Number of Sequences: 59808
Number of extensions: 460734
Number of successful extensions: 1096
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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