Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0034
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 31 0.86
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 31 1.1
02_02_0371 - 9513742-9514293,9514784-9514923,9515217-9515556,951... 31 1.5
11_05_0077 - 18866707-18867334,18867410-18867555 30 2.6
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 30 2.6
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290... 30 2.6
06_03_0606 - 22689935-22689998,22690716-22691159,22691669-226920... 29 3.5
07_03_0845 - 21979581-21981281 29 4.6
02_02_0347 + 9222556-9222927 29 4.6
09_04_0460 - 17779111-17780184 29 6.1
09_02_0158 - 5102148-5103818 29 6.1
07_01_0975 + 8223269-8224354 29 6.1
03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100... 29 6.1
02_05_1113 + 34207997-34208380 29 6.1
07_01_0947 + 7982783-7983619,7983713-7983859,7983953-7984318 28 8.1
03_06_0754 - 36025579-36027000 28 8.1
01_01_0728 + 5684699-5685025 28 8.1
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -3
Query: 205 IPGKG-GRPTAVPHREPGVPAGTEAGRERGLIRGPPCVGEQRDSRRQPRVLRLHN-PAV 35
+P G G PH EP A E RG R P G +R+ RR+P + H+ PAV
Sbjct: 356 VPEVGDGDDRPAPHDEPAAGAAAELRAARGGERQP---GPRREGRRRPPLAAAHDEPAV 411
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 199 GKGGRPTAVPHREPGVPAGTEAGRERGLIRGPP 101
G+G RP + + P P G R RG+ R PP
Sbjct: 31 GRGRRPASAMGQAPSSPPGPGRSRSRGISRWPP 63
>02_02_0371 -
9513742-9514293,9514784-9514923,9515217-9515556,
9515659-9515721,9515812-9515910,9516016-9516126,
9517114-9517257
Length = 482
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 175 VPHREPGVPAGTEAGRERGLIRGPPCVGEQRDSRRQPRVLRLHNPAVAVTP 23
VP + G P +A GL R G QR + P ++ NP ++ TP
Sbjct: 3 VPGSQNGRPRPAKAETIHGLARAGDLAGVQRKLQENPALINDRNPVMSQTP 53
>11_05_0077 - 18866707-18867334,18867410-18867555
Length = 257
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 199 GKGGRPTAVPHREPGV-PAGTEAGRERGLIRGPPCVGEQRDSRRQPRVLRLHNPAVAVTP 23
G GG V R G A +A RG P VG +R +R PR+L H P V + P
Sbjct: 38 GGGGGEAGVRRRTRGTWCAAPDAVAHRG---EDPGVGARRGARAGPRLLPPHRPPVPLRP 94
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 51 SRSTRGCRRLS-RCSPTQGGPRMSPRSRPASVPAGTPGSR 167
S+ G RL C P G P PR+ P+SVP P R
Sbjct: 141 SQLVLGLHRLGFACIPRSGAPLTRPRTAPSSVPHQPPPRR 180
>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
2907650-2907790,2907870-2908043,2908577-2908851,
2909592-2909755,2910409-2910536,2910628-2910734,
2911747-2911880,2912266-2912441,2912530-2914257,
2915084-2915239,2915328-2915486,2915581-2915751,
2915931-2916047,2916417-2916473,2916565-2916680,
2916790-2916916,2917862-2917945
Length = 2056
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/105 (20%), Positives = 43/105 (40%)
Frame = -1
Query: 417 DRLTWGDGKDYTSHHVSWQLISLWEDNNVIFKILNTEYEMYLKLDVNVDSYGDRKTWGSN 238
D+ +WG+ S +W + + N + ++ + V+ + D+++WG+
Sbjct: 1729 DKESWGNVPASPSDS-AWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNV 1787
Query: 237 GSSEKRHTWSLYPVKVGDQQLFLIENREYRQGLKLDANVDSYGDR 103
+S W+ PV GD + + E + D D +G R
Sbjct: 1788 PASPSDSAWNAAPVSQGDD---VWNSAEANESRNKDWKSDGWGAR 1829
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = -1
Query: 273 DSYGDRKTWGSNGSSEKRHTWSLYPVKVGDQQLFLIENREYRQGLKLDANVDSYGDRLVW 94
DS D+++WG+ +S W+ PV G++ ++ + + + D+ W
Sbjct: 1725 DSVKDKESWGNVPASPSDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESW 1784
Query: 93 GS 88
G+
Sbjct: 1785 GN 1786
>06_03_0606 - 22689935-22689998,22690716-22691159,22691669-22692057,
22692130-22692223,22692507-22692599,22692705-22692913,
22692999-22693833,22693948-22694038,22698069-22698892,
22699384-22700489,22701353-22701415
Length = 1403
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 208 FIPGKGGRPTAVPHREPGVPAGTEAGRERGLIRGPPCVGEQRDSRRQP 65
F G+ G P + R G PA ++RG G +R RQP
Sbjct: 1291 FNGGRRGAPATLAPRSGGAPAVARRQNRAKILRGEKVGGARRGGARQP 1338
>07_03_0845 - 21979581-21981281
Length = 566
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Frame = -1
Query: 456 QALKLDANVGEYNDRLTWGDGKDYT----SHHVSW----QLISLWEDNNVIFK 322
Q ++ GEY DR++W D +D S+HV Q +SLW + V ++
Sbjct: 167 QRFGINKITGEYQDRVSWKDPEDPAPGPFSNHVDLIRLNQYVSLWNQSKVYWQ 219
>02_02_0347 + 9222556-9222927
Length = 123
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 193 GGRPTAVPHREPGVPAGTEAGRERGLIRGPPCVGEQRDSRRQP 65
GGR P R P T + E + C GEQR RR+P
Sbjct: 49 GGRAGREPQRRRPPPPWTRSAAEAVAVGKGHCQGEQRRWRRRP 91
>09_04_0460 - 17779111-17780184
Length = 357
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = -1
Query: 273 DSYGDRKTWGSNGSSEKRHTWSLYPVKVGDQQLFLIENREYRQGL 139
D +GD G + H W + V + + + I EYR G+
Sbjct: 107 DGFGDGDEEAGGGGGDVHHVWYIRTVGLDEATITSIATAEYRAGV 151
>09_02_0158 - 5102148-5103818
Length = 556
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 181 TAVPHREPGVPAGTEAGRERGLIRGPPCVGEQRD 80
T P PG P AG ERG +R PP +D
Sbjct: 80 TTSPAHGPGQPPLDSAGGERGQLRRPPTPETDKD 113
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 96 TQGGPRMSPRSRPASVPAGTPGS 164
+ G P SP S P+S P+G+P S
Sbjct: 240 SSGSPSSSPSSSPSSSPSGSPSS 262
>03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,
1008103-1008273,1008405-1008553,1008780-1008927,
1009015-1009083,1009168-1009416,1009516-1009710,
1009869-1009985,1010205-1011329
Length = 921
Score = 28.7 bits (61), Expect = 6.1
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = -1
Query: 462 YNQALKLDANVGEYNDRLTWGDGKDYTSHHVSWQLISLWEDN-NVIFKILNTEYEMYLKL 286
Y A L A G+ ND L + D+T + W +SLW ++ + + + +
Sbjct: 795 YTWANMLSAPRGQVNDPLITQNSTDFTVALMDWFWMSLWAEHIGAVEESFSCPESLECTR 854
Query: 285 DVNVDSYGDRKTWGSNGSSEKRHTWSLYPVKV 190
V + + + S+ SE R YPV V
Sbjct: 855 QVRHIGEQNWRQFASSEVSEMRGHLVKYPVSV 886
>02_05_1113 + 34207997-34208380
Length = 127
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 805 WSRVRTARRLEDPDGIQHEDGLCRRNVNQQP 713
W R RTARR DG E+G C R + P
Sbjct: 45 WRRSRTARRTPVADGDGSEEGGCGRGRRRGP 75
>07_01_0947 + 7982783-7983619,7983713-7983859,7983953-7984318
Length = 449
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 12 GI*KGVTATAGL*SRSTRGCRRLSRCSPT 98
G+ G A L R RGCRRLS SPT
Sbjct: 186 GVLAGCAALDCLLLRGVRGCRRLSISSPT 214
>03_06_0754 - 36025579-36027000
Length = 473
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 391 RLHQPPCQLATHLSLGRQQRDIQDTEHRIRDVLETGRER 275
R H+ Q+A +L D+ D EH +R +L+T R
Sbjct: 145 RAHKMDKQVAATSALRTAMEDLADAEHGLRKLLQTSSSR 183
>01_01_0728 + 5684699-5685025
Length = 108
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 33 ATAGL*SRSTRGCRRLSRCSPTQGG---PRMSPRSRPASVPAGTPGSR*GTAVGLPPLPG 203
++AG + + G R + SP + PR P P S PA T G+R +G P PG
Sbjct: 48 SSAGAAAAAVAGRRSTASSSPPEEEMLLPRRPPL--PLSPPAATTGARSSRMLGSVPSPG 105
Query: 204 I 206
+
Sbjct: 106 V 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,158,445
Number of Sequences: 37544
Number of extensions: 470848
Number of successful extensions: 1633
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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