Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0031
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to autop... 159 1e-39
At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to autop... 154 4e-38
At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to autop... 154 4e-38
At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to autop... 153 1e-37
At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to autop... 153 1e-37
At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to autop... 152 2e-37
At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to autop... 146 1e-35
At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to autop... 144 3e-35
At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to autop... 144 3e-35
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 144 3e-35
At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to autop... 122 3e-28
At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to autop... 118 4e-27
At5g06680.1 68418.m00754 tubulin family protein similar to SP|Q9... 30 1.1
At3g01015.1 68416.m00001 expressed protein ; expression supporte... 29 3.5
At4g19080.1 68417.m02813 hypothetical protein contains Pfam doma... 28 4.6
At1g49050.1 68414.m05500 aspartyl protease family protein contai... 28 4.6
At5g54830.1 68418.m06829 DOMON domain-containing protein / dopam... 28 6.1
>At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to
autophagy 8d [Arabidopsis thaliana] GI:19912157;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 120
Score = 159 bits (387), Expect = 1e-39
Identities = 67/112 (59%), Positives = 91/112 (81%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
+K EH EKR+AE +IR KYPDR+PVIVE+A K+ + D+D+KKYLVP+DLTVGQF +++
Sbjct: 6 FKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVV 65
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
RKRI L PE A+F FV N++PPT+A M ++Y+EH DED FLY+++S EN +G
Sbjct: 66 RKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117
>At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 154 bits (374), Expect = 4e-38
Identities = 68/115 (59%), Positives = 88/115 (76%)
Frame = +2
Query: 47 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 226
K +K+EH EKR+AE +IR KYPDR+PVIVEKA K+ + +DKKKYLVP+DLTVGQF
Sbjct: 3 KSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFV 62
Query: 227 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
++IRKRI L E A+F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G
Sbjct: 63 YVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 154 bits (374), Expect = 4e-38
Identities = 68/115 (59%), Positives = 88/115 (76%)
Frame = +2
Query: 47 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 226
K +K+EH EKR+AE +IR KYPDR+PVIVEKA K+ + +DKKKYLVP+DLTVGQF
Sbjct: 3 KSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFV 62
Query: 227 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
++IRKRI L E A+F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G
Sbjct: 63 YVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 153 bits (370), Expect = 1e-37
Identities = 69/112 (61%), Positives = 87/112 (77%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
+K + FEKRKAE +IR KYPDR+PVIVEKA K+ + ++DKKKYLVPSDLTVGQF ++I
Sbjct: 7 FKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
RKRI L E A+F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 67 RKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 153 bits (370), Expect = 1e-37
Identities = 69/112 (61%), Positives = 87/112 (77%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
+K + FEKRKAE +IR KYPDR+PVIVEKA K+ + ++DKKKYLVPSDLTVGQF ++I
Sbjct: 7 FKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
RKRI L E A+F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 67 RKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to
autophagy 8g [Arabidopsis thaliana] GI:19912163;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912162|dbj|AB073181.1|
Length = 121
Score = 152 bits (368), Expect = 2e-37
Identities = 66/113 (58%), Positives = 90/113 (79%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
++++H FEKRKAE +IR KY DRVPVIVEK+ K+ + ++DKKKYLVP+DLTVGQF ++I
Sbjct: 6 FRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVI 65
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN 394
RKRI L E A+F FV+NV+PPT A M ++Y E+ +ED FLY+ +S EN +G+
Sbjct: 66 RKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118
>At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to
autophagy 8a [Arabidopsis thaliana] GI:19912151;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 146 bits (353), Expect = 1e-35
Identities = 64/116 (55%), Positives = 87/116 (75%)
Frame = +2
Query: 47 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 226
K +K + E R +E +IR KYPDR+PVIVEKA ++ + D+DKKKYLVP+DLTVGQF
Sbjct: 3 KSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFV 62
Query: 227 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN 394
+++RKRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G+
Sbjct: 63 YVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
>At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 144 bits (350), Expect = 3e-35
Identities = 65/118 (55%), Positives = 87/118 (73%)
Frame = +2
Query: 47 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 226
K +K + E R AE +IR KYP+RVPVIVEKA ++ + D+DKKKYLVP+DLT+GQF
Sbjct: 3 KNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFV 62
Query: 227 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN*F 400
+++RKRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F
Sbjct: 63 YVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
>At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 144 bits (350), Expect = 3e-35
Identities = 65/118 (55%), Positives = 87/118 (73%)
Frame = +2
Query: 47 KFQYKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 226
K +K + E R AE +IR KYP+RVPVIVEKA ++ + D+DKKKYLVP+DLT+GQF
Sbjct: 3 KNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFV 62
Query: 227 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN*F 400
+++RKRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F
Sbjct: 63 YVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 144 bits (350), Expect = 3e-35
Identities = 62/112 (55%), Positives = 86/112 (76%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
+K EH E+R+ E +IR KYPDR+PVIVE+A ++ + ++DKKKYLVP+DLTVGQF +++
Sbjct: 6 FKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVV 65
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
RKRI L E A+F FV N +PPT+A M ++Y E+ DED FLY+ +S EN +G
Sbjct: 66 RKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
>At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to
autophagy 8i [Arabidopsis thaliana] GI:19912167;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|21636957|gb|AF492760.1|
Length = 115
Score = 122 bits (293), Expect = 3e-28
Identities = 52/112 (46%), Positives = 79/112 (70%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
+KE+++ ++R AE +I KYP R+PVI EK K L ++KKK+LVP D++VGQF +++
Sbjct: 4 FKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYIL 63
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
R+HL P ALF FVNN +P T+A M S+Y+ + D+D F+Y+ +S E +G
Sbjct: 64 SARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
>At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to
autophagy 8h [Arabidopsis thaliana] GI:19912165;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912164|dbj|AB073182.1|
Length = 119
Score = 118 bits (283), Expect = 4e-27
Identities = 53/112 (47%), Positives = 74/112 (66%)
Frame = +2
Query: 56 YKEEHSFEKRKAEGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLI 235
+K++ S ++R E I KYPDR+PVI+EK A L D++K KYLVP D+TVG F ++
Sbjct: 8 FKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHML 67
Query: 236 RKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 391
KR+ L P ALF FV+N +P T++ M SLY +ED FLY+ +S E +G
Sbjct: 68 SKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
>At5g06680.1 68418.m00754 tubulin family protein similar to
SP|Q96CW5 Gamma-tubulin complex component 3 {Homo
sapiens}
Length = 838
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 385 LWKLI-PNYSLSNSFTLSDHMVKFNLSLRLKLCIILW 492
+WK + PN SNSF VK L L+ C +LW
Sbjct: 622 IWKTMKPNCITSNSFVKLQSSVKLQLLSALRRCQVLW 658
>At3g01015.1 68416.m00001 expressed protein ; expression supported
by MPSS
Length = 488
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 38 INMKFQYKEEHSFEKRKAEGEKIRRKYPDRVP 133
IN+ QYK E +++ AE E+IRR + VP
Sbjct: 396 INLVEQYKTERERQQKLAEEEEIRRLRKELVP 427
>At4g19080.1 68417.m02813 hypothetical protein contains Pfam domain,
PF04578: Protein of unknown function, DUF594
Length = 327
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 346 RFLFIHSIFRRKCLWKLIPNYSLSNSFTLSDHMVKFNLSLRLKLCIILWYFFYY*LAYNT 525
R L+ +F R CL + NY L F++SD + + + R +L LW F + + + +
Sbjct: 13 RTLYPFRLFIRFCLGIPLINYLLE-FFSISDQVNEIVFTSRTRLTKELWEFIFEEVKHRS 71
Query: 526 IFV 534
+ V
Sbjct: 72 LLV 74
>At1g49050.1 68414.m05500 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease; contains
similarity to nucellin GI:2290203 from [Hordeum vulgare]
Length = 583
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 176 DKKKYLVPSDLTVGQFYFLIRKRIHLRPEDAL 271
D KK+ P L +G + +I +++ ++PED L
Sbjct: 485 DVKKFFRPITLQIGSKWLIISRKLLIQPEDYL 516
>At5g54830.1 68418.m06829 DOMON domain-containing protein / dopamine
beta-monooxygenase N-terminal domain-containing protein
contains Pfam PF03351: DOMON domain
Length = 907
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 352 LFIHSIFRRKCLWKL-IPNYSLS----NSFTLSDHMVKF 453
L+ HSIF+ K WK+ + + LS NS L D VKF
Sbjct: 490 LYYHSIFQEKMGWKVQVVDGGLSDMYNNSVNLDDQQVKF 528
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,248,565
Number of Sequences: 28952
Number of extensions: 275242
Number of successful extensions: 759
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -