Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0028
(956 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 144 2e-34
U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel siste... 30 4.1
BT023158-1|AAY55574.1| 342|Drosophila melanogaster IP09321p pro... 29 7.1
AY084178-1|AAL89916.1| 601|Drosophila melanogaster RE52725p pro... 29 7.1
AF000178-1|AAB58341.1| 598|Drosophila melanogaster M-spondin pr... 29 7.1
AE014298-2005|AAF48347.1| 273|Drosophila melanogaster CG11585-P... 29 7.1
AE014134-1266|AAF52507.1| 669|Drosophila melanogaster CG5155-PA... 29 7.1
AE013599-1935|AAF58219.1| 601|Drosophila melanogaster CG10145-P... 29 7.1
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 144 bits (348), Expect = 2e-34
Identities = 107/298 (35%), Positives = 155/298 (52%), Gaps = 26/298 (8%)
Frame = +3
Query: 15 PRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRI--VEMYPGLAGKIIRWICACL 188
PR+ + LLQ L K+ IA V D + + A+ ++ +E P L II IC L
Sbjct: 1134 PRIKEVLQVLLQALQFKHHTIAIVAVDSLKLCAERGRQLAAIERVPQL---IITAICKAL 1190
Query: 189 AQLSTSCHRDTVKPLAGSLLLCLAEFAVRC-GPQYLMEEKDGEQTLLLLIFKVLYAVMKG 365
S + +D+ K + SL+LCL EF + P L + TL+L + +VL V G
Sbjct: 1191 EIQSVTKPKDSDKVVLTSLMLCLGEFCMAIPAPIMLTPFNEQGDTLVLQVLRVLLQVASG 1250
Query: 366 ANGSDIEGLSLPVDDDFDPTIQLDNL-GPKTIPASTID-----------VKLWAQTICTQ 509
A E + L DDDFD I D+L G +P +T +KL A+ +
Sbjct: 1251 APRH--ERVKLTADDDFDMHIAHDDLQGDGRLPEATYQTSETIQKCITAIKLCAKAVSMH 1308
Query: 510 LVLYLGHWPLWSGC-QLSCRVSEQHD--SPSLGEELG--------PAVLTAPNIQLMRFS 656
LV ++GH+P+ G +LS V EQ D + + G ++ P+V++A N+QL +
Sbjct: 1309 LVTHIGHFPMGIGASRLSSMVEEQDDIGNAAYGGQVETRRDSVELPSVVSAQNMQLFMLN 1368
Query: 657 DSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKACWDASALYFDPSGGQ 830
+AS IELP L LP G T GL T+++QVRVL+RD+ GKACWDAS LY +P +
Sbjct: 1369 SGLVASFIELPTLKLPG-GGITAGLVTADKQVRVLMRDLNGKACWDASILYSEPRNAE 1425
>U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel sister
chromatids protein protein.
Length = 1768
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 771 IGGKACWDASALYFDPSGG--QLEGGPGTQFA 860
+GG CW + A + P GG + E G G QFA
Sbjct: 132 VGGCGCWWSHAYFRCPGGGRSEAEAGQGRQFA 163
>BT023158-1|AAY55574.1| 342|Drosophila melanogaster IP09321p
protein.
Length = 342
Score = 29.5 bits (63), Expect = 7.1
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -2
Query: 445 PRLSSCIVGSKSSSTGRLRPSMSDPFAPFITAYNTLKINSKSVCSPSFSSIKY*GPQRTA 266
P +SS + SS + S S P ++Y+T ++ S +PS SS Y P +
Sbjct: 230 PAVSSYSAPAVSSYSAPAVSSYSAPAVSHGSSYSTSSLSHGSYAAPSVSSKTYAAPAVSH 289
Query: 265 NSAKHSSSDPASG 227
S SSS G
Sbjct: 290 GSYSGSSSGSGHG 302
>AY084178-1|AAL89916.1| 601|Drosophila melanogaster RE52725p
protein.
Length = 601
Score = 29.5 bits (63), Expect = 7.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 522 LGHWPLWSGCQLSCRVSEQH 581
+ HW W+ C SC V E H
Sbjct: 537 VSHWSEWTACSKSCGVGEMH 556
>AF000178-1|AAB58341.1| 598|Drosophila melanogaster M-spondin
protein.
Length = 598
Score = 29.5 bits (63), Expect = 7.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 522 LGHWPLWSGCQLSCRVSEQH 581
+ HW W+ C SC V E H
Sbjct: 534 VSHWSEWTACSKSCGVGEMH 553
>AE014298-2005|AAF48347.1| 273|Drosophila melanogaster CG11585-PA
protein.
Length = 273
Score = 29.5 bits (63), Expect = 7.1
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -2
Query: 445 PRLSSCIVGSKSSSTGRLRPSMSDPFAPFITAYNTLKINSKSVCSPSFSSIKY*GPQRTA 266
P +SS + SS + S S P ++Y+T ++ S +PS SS Y P +
Sbjct: 161 PAVSSYSAPAVSSYSAPAVSSYSAPAVSHGSSYSTSSLSHGSYAAPSVSSKTYAAPAVSH 220
Query: 265 NSAKHSSSDPASG 227
S SSS G
Sbjct: 221 GSYSGSSSGSGHG 233
>AE014134-1266|AAF52507.1| 669|Drosophila melanogaster CG5155-PA
protein.
Length = 669
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 174 ICACLAQLSTSCHRDTVKPLAGSLLLCLAE 263
I +AQL SCH D V P+ G++ C +E
Sbjct: 251 IVPLMAQLLKSCHIDVVIPIMGTVRKCSSE 280
>AE013599-1935|AAF58219.1| 601|Drosophila melanogaster CG10145-PA
protein.
Length = 601
Score = 29.5 bits (63), Expect = 7.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 522 LGHWPLWSGCQLSCRVSEQH 581
+ HW W+ C SC V E H
Sbjct: 537 VSHWSEWTACSKSCGVGEMH 556
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,481,969
Number of Sequences: 53049
Number of extensions: 970165
Number of successful extensions: 3244
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3239
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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