Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0026
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 272 2e-73
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 272 2e-73
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 258 4e-69
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 256 9e-69
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 256 1e-68
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 256 2e-68
U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical p... 75 4e-14
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 1.5
Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.6
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 272 bits (666), Expect = 2e-73
Identities = 124/187 (66%), Positives = 147/187 (78%)
Frame = -3
Query: 742 PLTGMSKETQQQLIDDHFLFKEGDRFMQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 563
PL GM+KE Q QLI DHFLFKEGDRF+QAANACR+WP GRGI+HN KTFL+WCNEEDHL
Sbjct: 173 PLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFLIWCNEEDHL 232
Query: 562 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 383
RIISMQ GG++ QV +RL+ V IEK+ PFS DRLG+LTFCP+NLGTTVRASVHI
Sbjct: 233 RIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSNLGTTVRASVHI-RL 291
Query: 382 XXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAE 203
+ + LQ+RG GEH+E+EGGVYDISNK R+GLTE++AVK+MYDGIA
Sbjct: 292 PKISAKPDFKSICDGLKLQIRGIHGEHSESEGGVYDISNKARLGLTEFEAVKQMYDGIAH 351
Query: 202 LIKIEKS 182
LI +EK+
Sbjct: 352 LIALEKA 358
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 272 bits (666), Expect = 2e-73
Identities = 124/187 (66%), Positives = 147/187 (78%)
Frame = -3
Query: 742 PLTGMSKETQQQLIDDHFLFKEGDRFMQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 563
PL GM+KE Q QLI DHFLFKEGDRF+QAANACR+WP GRGI+HN KTFL+WCNEEDHL
Sbjct: 210 PLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFLIWCNEEDHL 269
Query: 562 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 383
RIISMQ GG++ QV +RL+ V IEK+ PFS DRLG+LTFCP+NLGTTVRASVHI
Sbjct: 270 RIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSNLGTTVRASVHI-RL 328
Query: 382 XXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAE 203
+ + LQ+RG GEH+E+EGGVYDISNK R+GLTE++AVK+MYDGIA
Sbjct: 329 PKISAKPDFKSICDGLKLQIRGIHGEHSESEGGVYDISNKARLGLTEFEAVKQMYDGIAH 388
Query: 202 LIKIEKS 182
LI +EK+
Sbjct: 389 LIALEKA 395
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 258 bits (631), Expect = 4e-69
Identities = 118/186 (63%), Positives = 144/186 (77%)
Frame = -3
Query: 742 PLTGMSKETQQQLIDDHFLFKEGDRFMQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 563
PL GM K+TQ+QLI DHFLFKEGDR +Q ANAC FWP GRGI+HN +KTFL+W NEEDH+
Sbjct: 212 PLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFLIWVNEEDHM 271
Query: 562 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 383
RIISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTNLG+TVRASVHI
Sbjct: 272 RIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALP 331
Query: 382 XXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAE 203
+ E+ K +LQVRG GEH+E+ GGVYDISNK R+GL+EY AVK+MYDG+ +
Sbjct: 332 KLAARKDFI-EICEKLNLQVRGIHGEHSESVGGVYDISNKARLGLSEYQAVKQMYDGVKK 390
Query: 202 LIKIEK 185
LI++E+
Sbjct: 391 LIEMEE 396
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 256 bits (628), Expect = 9e-69
Identities = 117/186 (62%), Positives = 144/186 (77%)
Frame = -3
Query: 742 PLTGMSKETQQQLIDDHFLFKEGDRFMQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 563
PL GM K+TQ+QLI DHFLFKEGDR +Q ANAC FWP GRGI+HN +KTFL+W NEEDH+
Sbjct: 240 PLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFLIWVNEEDHM 299
Query: 562 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 383
RIISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTNLG+TVRASVHI
Sbjct: 300 RIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALP 359
Query: 382 XXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAE 203
+ E+ K +LQVRG GEH+++ GGVYDISNK R+GL+EY AVK+MYDG+ +
Sbjct: 360 KLAARKDFI-EICEKLNLQVRGIHGEHSDSVGGVYDISNKARLGLSEYQAVKQMYDGVKK 418
Query: 202 LIKIEK 185
LI++E+
Sbjct: 419 LIEMEE 424
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 256 bits (627), Expect = 1e-68
Identities = 117/186 (62%), Positives = 143/186 (76%)
Frame = -3
Query: 742 PLTGMSKETQQQLIDDHFLFKEGDRFMQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 563
PL GMSK+TQ QLI DHFLFKEGDR +Q ANAC FWP GRGI+HN KTFL+W NEEDHL
Sbjct: 185 PLDGMSKDTQNQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNKKTFLIWVNEEDHL 244
Query: 562 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 383
RIISMQ G D+ V +RL+ V IEK++ FS DRLG+LTFCPTNLG+TVRASVHI
Sbjct: 245 RIISMQEGSDVGAVLERLIKGVRGIEKQVQFSRDDRLGWLTFCPTNLGSTVRASVHI-AL 303
Query: 382 XXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAE 203
+++ K LQ+RG GEH+E+EGGVYDISN+ R+GL+EY+AVK+MYDG+
Sbjct: 304 PKLSAREDFKQICDKLDLQLRGIHGEHSESEGGVYDISNRARLGLSEYEAVKKMYDGVKN 363
Query: 202 LIKIEK 185
LI++E+
Sbjct: 364 LIEMEE 369
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 256 bits (626), Expect = 2e-68
Identities = 115/187 (61%), Positives = 148/187 (79%)
Frame = -3
Query: 742 PLTGMSKETQQQLIDDHFLFKEGDRFMQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 563
PLTGM +ET+++LI DHFLFKEGDRF++AANA R+WP GRGI+HNE KTFLVW NEEDHL
Sbjct: 173 PLTGMDEETKKKLIADHFLFKEGDRFLKAANANRYWPNGRGIFHNEKKTFLVWVNEEDHL 232
Query: 562 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 383
RIISMQ GG++ +V RL+ +N + K PF+ H RLG+LTFCPTNLGTTVRASVHI
Sbjct: 233 RIISMQNGGNVGEVLARLIKGLNLVAAKAPFARHPRLGWLTFCPTNLGTTVRASVHI-KL 291
Query: 382 XXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAE 203
+++ S LQ+RG GEH+E++ G+YDISNK+R+GLTEY AV++MYDG+ +
Sbjct: 292 PKISAKDDFKKICSDMKLQIRGIHGEHSESKEGIYDISNKQRLGLTEYQAVRQMYDGLKK 351
Query: 202 LIKIEKS 182
LI++EK+
Sbjct: 352 LIELEKA 358
>U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical
protein F11G11.13 protein.
Length = 106
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/76 (43%), Positives = 55/76 (72%)
Frame = -3
Query: 418 TTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEY 239
T++++SVHI +++ S+ LQ+RG GE+++ + G+YDISNK+R+GLTEY
Sbjct: 24 TSLKSSVHIKLPKISAKDDF-KKICSEMKLQIRGIHGEYSDLKEGIYDISNKQRLGLTEY 82
Query: 238 DAVKEMYDGIAELIKI 191
AV++MYDG+ +LI++
Sbjct: 83 QAVRQMYDGLKKLIEL 98
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -2
Query: 542 GRRP---AAGVQEAGERRQRDREEDPVLAPRPARLPHVLPDQ 426
GR P AG E E++ + E DP PRP P P+Q
Sbjct: 271 GRAPNTLKAGDHERKEKKPKKEERDPAAPPRPRGRPPKTPEQ 312
>Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 475 PFSHHDRLGFLTFCPTNLGTTVRASVH 395
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 475 PFSHHDRLGFLTFCPTNLGTTVRASVH 395
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,280,363
Number of Sequences: 27780
Number of extensions: 205459
Number of successful extensions: 758
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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