BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0018
(929 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY579078-1|AAT81602.1| 425|Anopheles gambiae neuropeptide F rec... 28 0.46
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 25 2.5
AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase p... 25 2.5
AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein. 25 2.5
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 23 10.0
>AY579078-1|AAT81602.1| 425|Anopheles gambiae neuropeptide F
receptor protein.
Length = 425
Score = 27.9 bits (59), Expect = 0.46
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 248 YNCTIDNLSTLSRSVRFRLISTRTRKRMI 162
+N T+DN++TLS ++R LI + R +
Sbjct: 8 FNLTLDNMTTLSSNIRQGLIEQYSNNRKV 36
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 826 KNPLYDMIRPETFEKTQIKKYTLGTYTPG 912
+N +M+R E EK +KYT+G +PG
Sbjct: 893 RNDFEEMLR-ERREKVLSEKYTIGDQSPG 920
>AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase
protein.
Length = 557
Score = 25.4 bits (53), Expect = 2.5
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 707 HDLLMCECILYAPN--SLRRELEAITRSDLRVVVVLKH 814
H+L E I ++ + ++R E A+ + D+ +++VL H
Sbjct: 192 HELSNTESITFSDSVAAVREEAAALKKRDVNIILVLSH 229
>AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein.
Length = 557
Score = 25.4 bits (53), Expect = 2.5
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 707 HDLLMCECILYAPN--SLRRELEAITRSDLRVVVVLKH 814
H+L E I ++ + ++R E A+ + D+ +++VL H
Sbjct: 192 HELSNTESITFSDSVAAVREEAAALKKRDVNIILVLSH 229
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 23.4 bits (48), Expect = 10.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 211 LERVDRLSIVQLYVLVDWFSMLIVFWCAL 297
L+ V+ L I+ +V + F ++ WC+L
Sbjct: 253 LKCVELLEIIFRWVFLGQFIQCVMIWCSL 281
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,035,813
Number of Sequences: 2352
Number of extensions: 20942
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -