Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0013
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0160 + 2351438-2351761 33 0.21
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 32 0.63
02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936... 32 0.63
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 31 1.1
10_01_0073 - 955746-955758,955811-956832 31 1.1
10_01_0072 - 918323-918335,918388-919409 31 1.1
05_05_0294 + 23900690-23900812,23900976-23901008 31 1.1
06_01_0592 - 4277789-4278955 31 1.5
07_01_0664 + 4979892-4979931,4980040-4980236,4982340-4982723,498... 30 1.9
03_05_0161 + 21400580-21401695 30 2.6
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 29 3.4
11_06_0717 - 26575009-26575152,26576461-26577978 29 5.9
09_02_0536 + 10354538-10354693,10357407-10357684,10357717-10357852 29 5.9
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 29 5.9
04_04_1202 - 31700414-31700854 29 5.9
04_01_0611 - 8029101-8029205,8029985-8030107,8030191-8030556,803... 29 5.9
11_06_0183 - 20999343-20999865,21000351-21000748 28 7.8
04_04_1652 - 35066814-35067659 28 7.8
02_04_0312 - 21942310-21943356 28 7.8
>09_01_0160 + 2351438-2351761
Length = 107
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 598 SGFYQDAVHER*PVRSPPPLQYLAWEARLTP 506
+G D V PVR+PP Q+ AW ARL P
Sbjct: 29 AGVPADVVEAESPVRAPPDEQFAAWVARLRP 59
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 31.9 bits (69), Expect = 0.63
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +1
Query: 379 IRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDIEEEEGFV 558
+ DSGG R++ + S S GES+K+ + + ++ D PP D +E+
Sbjct: 484 VSDSGGRATRRLAKDDDIKS--SFKKTGEGESSKKKQKENLKQQEDTPPDEDTDEDLSLK 541
Query: 559 PVIS--HGRRPGKNRRD------RERKAPPRAHKTPQ 645
++S + GKN+ +RK A +TPQ
Sbjct: 542 DIVSPKSSAKTGKNKGQAGDSGGSKRKRAQEAEETPQ 578
>02_05_0190 -
26592452-26592693,26592911-26593004,26593425-26593656,
26594660-26595066
Length = 324
Score = 31.9 bits (69), Expect = 0.63
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 346 ASRRGARARTYIRDSGGVMAARV----SAEGAGPSYASVLNFKGGESNKENIEAHAEEAL 513
+S G R RT R G ++ A SA A + S + GE E + A AEEA+
Sbjct: 43 SSSSGGRPRT--RSGGRLLRATSPPPPSAIAAAACWESRTMRREGEEEWEEVVAGAEEAV 100
Query: 514 DAPPRPDIEEEEGF 555
P P EEEE +
Sbjct: 101 HGAPVPVAEEEEEY 114
>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/97 (22%), Positives = 40/97 (41%)
Frame = +1
Query: 346 ASRRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPP 525
ASR A + +++ AR A+G S S ++F GG+ N + + + D PP
Sbjct: 900 ASRHEAAEHAHAKNTAAAADARSKAKG---SVFSRISFPGGDGNPSDAKRSRRSSSDKPP 956
Query: 526 RPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRAHK 636
+ ++ G++ R R+A A +
Sbjct: 957 ASSSSSSKKARAAVAED-NDGRHHRRHHREAAAAAEE 992
>10_01_0073 - 955746-955758,955811-956832
Length = 344
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 511 LDAPPRPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRA 630
+D PP P + ++G P + ++P K+ RE APP A
Sbjct: 184 IDEPPPPK-KRQQGRQPKVPRAKKPKKSAAPREDGAPPNA 222
>10_01_0072 - 918323-918335,918388-919409
Length = 344
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 511 LDAPPRPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRA 630
+D PP P + ++G P + ++P K+ RE APP A
Sbjct: 184 IDEPPPPK-KRQQGRQPKVPRAKKPKKSAAPREDGAPPNA 222
>05_05_0294 + 23900690-23900812,23900976-23901008
Length = 51
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 563 SSLMDGVLVKTGGTGNGKHPR-ELIKHHNSMLTLSP 667
++L+DGV V GG NG+ P E+IKHH+ + P
Sbjct: 17 AALVDGVAVD-GGEANGEVPADEVIKHHHKLYEQQP 51
>06_01_0592 - 4277789-4278955
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 562 PVRSPPPLQYLAWEARLTP 506
PVR+PP Q+ AW ARL P
Sbjct: 44 PVRAPPDEQFAAWVARLRP 62
>07_01_0664 +
4979892-4979931,4980040-4980236,4982340-4982723,
4983499-4983549,4983659-4983741,4983818-4983917,
4984410-4984488,4984957-4985080,4985605-4985711,
4985810-4985938,4987004-4987089,4987200-4987367,
4987477-4987637,4987721-4987752,4987866-4988047,
4988386-4988465,4988885-4988950,4989060-4989349,
4990433-4990540,4991521-4991618,4991680-4991782,
4992269-4992345,4992449-4992520,4992579-4992670,
4992909-4992989,4993290-4993392,4994334-4994492,
4994696-4995085
Length = 1213
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 607 PCPS-GFYQDAVHER*PVRSPPPLQYLAWEARLTPPLRGP 491
P PS G+Y ++ PV +PP QY A+ PP R P
Sbjct: 9 PYPSQGYYNQGPYQGPPVMAPPHAQYQYQYAQPPPPPRQP 48
>03_05_0161 + 21400580-21401695
Length = 371
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 756 GGSTGVPPPAPPALEQEKRSPL 821
GG T PPP PPA +Q+++ PL
Sbjct: 18 GGGTTTPPPPPPA-QQQQQQPL 38
>01_06_0575 -
30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 723 AYSKSNPWQV-RGGSTGVPPPAPPALEQEKRS 815
A S W RGG G PPP P +E KRS
Sbjct: 21 AVDASKCWPFGRGGGDGEPPPPLPPMEPPKRS 52
>11_06_0717 - 26575009-26575152,26576461-26577978
Length = 553
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 388 SGGVMAARVSAEGAGPSYASVLNFK-GGESNKENIEAHAEEALDAPPRPDIEEEEGFVPV 564
+G ++ +G + A V K GG++ HA LD+ P D + GF+ +
Sbjct: 45 AGATRLMEMTTKGRADANAKVNQLKAGGDTKFLPALKHASGLLDSRPAGDKQYRPGFIFL 104
Query: 565 ISHGRRPG 588
+S G+ G
Sbjct: 105 LSDGQDNG 112
>09_02_0536 + 10354538-10354693,10357407-10357684,10357717-10357852
Length = 189
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 619 VLSVPCPSGFYQDAVHER*PVRSPPPLQYLAW 524
+L + PS FY +H +PPP+Q+ AW
Sbjct: 30 ILELHIPSNFYYPQLHR---TGAPPPVQHRAW 58
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 352 RRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEAL 513
RRG + ++ +G V+ + V A G+G +YAS + + N + A+A L
Sbjct: 1748 RRGRKPKSLAASAGDVILSPVVAVGSGEAYASSVVSSYPQGNVSSSHANAMAGL 1801
>04_04_1202 - 31700414-31700854
Length = 146
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 400 MAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDI 537
+ AR S E A P +S++ + ++ AEE DAPP P I
Sbjct: 6 LVARFSVEVAPPLLSSIIRPRRRRGFPAMLDTIAEEEPDAPPLPAI 51
>04_01_0611 -
8029101-8029205,8029985-8030107,8030191-8030556,
8030639-8031124
Length = 359
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 17/73 (23%)
Frame = +1
Query: 379 IRDSGGVMAARVSAEGAGPSY-----------ASVLNFKGGESNKE-NIEAHAEEAL--- 513
+R+ G A RV A+GA PSY A+ + +GG + K +E EE
Sbjct: 34 VREEGHSYAVRVPADGANPSYYLQYEKPLTNGAASTSSRGGAARKRCRMEEEEEEESSSG 93
Query: 514 --DAPPRPDIEEE 546
+ P PDIEE+
Sbjct: 94 EPEPAPDPDIEED 106
>11_06_0183 - 20999343-20999865,21000351-21000748
Length = 306
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 663 AHSGATATSCRTTAEEVC*SAYSKSN--PWQVRGGSTGVPPPAP 788
+ S ATS T+ E++ S+ KS+ PW G G PPAP
Sbjct: 21 SRSVVVATSSITSLEQLAASSSVKSSGAPWLGGSGILGPQPPAP 64
>04_04_1652 - 35066814-35067659
Length = 281
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 340 VIAS-RRGARARTYIRDSGGVMAARVSAEGAGPSYASVL-----NFKGGESNKENIEAHA 501
++AS R RAR + G +AA V+ EG+G + L +GG S +E A A
Sbjct: 56 ILASLARPRRARRVPLEEGTDLAAAVAREGSGCYVLAALRRSRRERRGGRSRREKKAAAA 115
Query: 502 EEALDAPPRPDIEE 543
A A P +E
Sbjct: 116 AAAAGAAPAAPTQE 129
>02_04_0312 - 21942310-21943356
Length = 348
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 774 PPPAPPALEQEKRSP 818
PPP PP+LEQ+ SP
Sbjct: 181 PPPPPPSLEQDTASP 195
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,782,221
Number of Sequences: 37544
Number of extensions: 520605
Number of successful extensions: 2795
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2772
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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