Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0011
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 30 2.7
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 29 4.8
Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.3
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 28 8.4
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 652 QWHPPRVWYSFHH*VLKQMNPPR 584
QW+PP V S+HH + Q PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 652 QWHPPRVWYSFHH*VLKQMNPPR 584
QW+PP V S+HH + Q PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 652 QWHPPRVWYSFHH*VLKQMNPPR 584
QW+PP V S+HH + Q PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 652 QWHPPRVWYSFHH*VLKQMNPPR 584
QW+PP V S+HH + Q PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 572 PCVVPWWIHLLQHL-MMKAIPDPWWMPLLISQSAKQISGTMELVC 703
PC++P W+H++QH + A + LI A+Q+ L+C
Sbjct: 124 PCIMPLWLHVIQHAGFLFAQLTNGILVYLIVTKAQQLGTYRHLMC 168
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 691 GARLCSMYDSVAQPEESVFRECLLERCSVEENKIISGL 804
GA + +YD PEE + R+C C E K++ L
Sbjct: 295 GASIGMVYDRKTTPEEVIQRQCKKFGCETEREKMLHKL 332
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 691 GARLCSMYDSVAQPEESVFRECLLERCSVEENKIISGL 804
GA + +YD PEE + R+C C E K++ L
Sbjct: 295 GASIGMVYDRKTTPEEVIQRQCKKFGCETEREKMLHKL 332
>Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 660 VNRRSKFPVQWSSFVFNVRFSGAT*GVCI 746
+++R+ P+ W+SF++N+ G T C+
Sbjct: 212 ISKRTNNPLMWNSFIYNLTEDGRTHEKCL 240
>Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 28.7 bits (61), Expect = 6.3
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 660 VNRRSKFPVQWSSFVFNVRFSGAT*GVCI 746
+++R+ P+ W+SF++N+ G T C+
Sbjct: 212 ISKRTNNPLMWNSFIYNLTEDGRTHEKCL 240
>Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical
protein T24D5.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 LRQFQTN-QRWILLNRSYQQMLKNGTLQITLLKPYPLTTLNLPHIDHLAPLYKVDFVKLK 439
LR F T +R + L +S ++L + + I L+ L L + DH LY + K+K
Sbjct: 209 LRAFSTEVKRRVYLEKS--EVLDDQPIAIEFLE-LRLGQLLDGNDDHAVTLYTLMSNKIK 265
Query: 440 IKIHTIWMTCLIHLK 484
I++ T+ ++ ++HL+
Sbjct: 266 IELDTVLLSLILHLE 280
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +1
Query: 268 AVSDEPKVDTSKSKLSADAKEWYPANYTSQALPAYNTEPAPYRPS 402
A S P D S S A W A Y SQA AY+ EPA P+
Sbjct: 507 AASTGPSYDQS-SAAGGYAASW-DAYYASQAQSAYSAEPASTYPT 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,590,395
Number of Sequences: 27780
Number of extensions: 518933
Number of successful extensions: 1487
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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