Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0009
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0233 - 16061182-16061714,16062765-16063578 33 0.13
08_02_0037 + 11480213-11481013,11483612-11483707 33 0.13
10_01_0098 - 1193184-1193703,1193814-1193872 32 0.39
03_06_0471 + 34169562-34169892,34170121-34170347 31 0.89
10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161 30 1.2
12_02_0674 - 21745321-21746223,21746229-21747608 29 2.1
12_02_0364 - 18020249-18020737,18021075-18021502,18021563-180216... 29 2.1
12_01_0656 - 5554906-5555194,5555640-5556178 29 2.7
08_01_0758 - 7193287-7193871,7193965-7194421,7194437-7194655,719... 29 2.7
08_01_0757 - 7164380-7164490,7164585-7165041,7165057-7165275,716... 29 2.7
05_03_0356 + 12894195-12894237,12894347-12894484,12894868-128950... 29 2.7
01_06_1440 + 37378121-37378958,37379344-37379494,37379567-373799... 29 2.7
01_06_0718 - 31467530-31467892,31468017-31468178,31468268-314684... 29 3.6
12_02_0064 + 13104835-13105311,13107731-13108119,13108156-131082... 28 4.8
11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461... 28 4.8
08_01_0876 - 8598664-8599374 28 4.8
07_03_0991 + 23174743-23175726 28 4.8
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 28 4.8
01_03_0138 + 12963464-12965059,12965085-12965660 28 4.8
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 28 6.3
08_02_0360 + 16196712-16197560,16198126-16198875 28 6.3
01_04_0138 + 16554175-16554822 28 6.3
12_01_0900 - 8724339-8724380,8725263-8725376,8726491-8726559,872... 27 8.3
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 27 8.3
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 27 8.3
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 27 8.3
01_01_0722 + 5639760-5640101 27 8.3
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 198 PTTE*SPLSASSNSRLPTAEFSREPHATCFALRSPTSRAGRLSQFR 61
PT +PL +SS+S LP P + A R PTS AG R
Sbjct: 120 PTVNGAPLCSSSSSALPPPHSRTPPASPLAAARGPTSHAGETGSRR 165
>08_02_0037 + 11480213-11481013,11483612-11483707
Length = 298
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 369 RPRPYDRRSTGSSLRDA*STFPQFRTPTPLRGSTTRQSALSTPSGERSTRRRLLCPAAG 545
RPRP +R + L A TPL + T S S+ SG+ S+R+R P AG
Sbjct: 173 RPRPVERAHVKTVLAAAKEAMEASSPETPLDYAATTGSGASS-SGDESSRKRKAAPGAG 230
>10_01_0098 - 1193184-1193703,1193814-1193872
Length = 192
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 377 PLRPKVDWELFKRRLVDLPA 436
PL+P VD EL+KRR++DL A
Sbjct: 142 PLQPHVDQELYKRRMMDLDA 161
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 271 GATVPLNY*GTVRPGYPPSPYPGHTGNG 354
GA P Y +PGYPP+ YPGH G+G
Sbjct: 82 GAYPPSGY--PQQPGYPPAGYPGH-GHG 106
>10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161
Length = 255
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 206 RRGRPQ-SSRPYRHLLTAACPLLSSVGSPTRRASR*GP 96
+RGRP+ SSR C + ++V PTRR++R GP
Sbjct: 178 KRGRPRGSSRGRGRGTNVGCKVSTAVPRPTRRSTREGP 215
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/78 (37%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 393 TFGRRGEVATRVSPIPSVTRIGRWGVPRSYSASIVKGHRSPL*THTSNTSGWSCAAVGMC 214
T R GE++T IP+ TR G S G S L T TS S SCA
Sbjct: 622 TTARTGELSTPTDKIPTTTRAGDLSTATS-KIPTAPG-TSELSTTTSKISSTSCAGQFST 679
Query: 213 VGSSGPTTE-*SPLSASS 163
PTT S L+ASS
Sbjct: 680 STYGIPTTTCTSKLTASS 697
>12_02_0364 -
18020249-18020737,18021075-18021502,18021563-18021649,
18022059-18022192,18023051-18023053,18023129-18023187,
18023429-18023887
Length = 552
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 37 SPRGHKTGPELRQPPSSAGRGPQREARRV 123
+PRG T PP +AGRG ARRV
Sbjct: 25 TPRGMSTPDGTATPPPAAGRGAATPARRV 53
>12_01_0656 - 5554906-5555194,5555640-5556178
Length = 275
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 171 ASSNSRLPTAEFSREPHATCFAL 103
A+S +++PT ++S+E HA C L
Sbjct: 106 ATSTTKIPTTDYSKETHAKCSML 128
>08_01_0758 -
7193287-7193871,7193965-7194421,7194437-7194655,
7194881-7195419
Length = 599
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 171 ASSNSRLPTAEFSREPHATCFAL 103
A+S +++PT ++S+E HA C L
Sbjct: 106 ATSTTKIPTTDYSKETHAKCSML 128
>08_01_0757 -
7164380-7164490,7164585-7165041,7165057-7165275,
7165501-7165757
Length = 347
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 171 ASSNSRLPTAEFSREPHATCFAL 103
A+S +++PT ++S+E HA C L
Sbjct: 12 ATSTTKIPTTDYSKETHAKCSML 34
>05_03_0356 +
12894195-12894237,12894347-12894484,12894868-12895018,
12895399-12895526,12895704-12895840,12896742-12896847,
12898659-12898762,12899159-12899281,12899620-12899700,
12900159-12900304,12902171-12902243,12902970-12903060,
12904978-12905018,12906079-12906153,12906402-12906569,
12907638-12907676,12907759-12907847,12908014-12908078,
12908794-12908840,12908924-12908983,12909168-12909239,
12910143-12910172,12910526-12910617,12910719-12910802,
12911941-12912046,12912171-12912233,12912776-12912870,
12913000-12913180
Length = 875
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 37 SPRGHKTGPELRQPPSSAGRGPQ-REARR 120
+PRGHK P+ R PS G GP+ RE +R
Sbjct: 12 APRGHKRRPK-RTRPSGKGGGPEPREEKR 39
>01_06_1440 + 37378121-37378958,37379344-37379494,37379567-37379936,
37380021-37380431,37380522-37380820,37380897-37381155,
37381248-37381497,37381744-37381875,37381936-37382208,
37383023-37383267
Length = 1075
Score = 29.1 bits (62), Expect = 2.7
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 315 VPPISLSWSHWEWGSPGLRPRPYDRRSTGSSLRDA*STFP-QFRTPT-PLRGSTTRQSAL 488
VPP L++SH + G R R + ST S LR A P +F P+ P+ Q +
Sbjct: 974 VPPDRLTYSHGHIRAQGRRDREH---STKSPLRRAARGPPAKFHAPSPPICRRPPAQYKI 1030
Query: 489 STPSGERSTRRRLLCPAAGPEVYSRP 566
+ G + + CP + P + RP
Sbjct: 1031 TLAEGGKGAACKFPCPPS-PPICRRP 1055
>01_06_0718 -
31467530-31467892,31468017-31468178,31468268-31468415,
31468536-31468612,31468693-31468763,31468965-31469051,
31469138-31469602,31470357-31470659,31471151-31471202
Length = 575
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = -1
Query: 258 TSNTSGWSCAAVGMCVGSSGPTTE*SPLSASSNSRLPTAEFSREPHATCFALRSPTSRAG 79
T + S C+ G+ S TT SP +S+ PT + S TC+ +S G
Sbjct: 34 TRDASSGDCSPAGL-TPSGDATTGDSPAGVTSSGESPTCDTSPGEPPTCYTSPGDSSYTG 92
Query: 78 RLSQFRT 58
S T
Sbjct: 93 GSSTSAT 99
>12_02_0064 +
13104835-13105311,13107731-13108119,13108156-13108286,
13108378-13108469,13108488-13109264,13109291-13109320
Length = 631
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 304 VRPGYPPSPYPGHTGNG 354
V PGY P+P PGH G
Sbjct: 448 VTPGYTPTPSPGHNETG 464
>11_03_0146 + 10744403-10744603,10745199-10745834,10745967-10746125,
10746398-10747036,10748018-10748151,10748281-10748464,
10748882-10749217,10751659-10751945,10752863-10753253,
10753351-10753615,10753740-10753818,10754123-10754543
Length = 1243
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 257 HPTRRAGVARRSECAWVRRGRPQSSRPYRHLLT-AACPLLSSVGSPTRRASR*GP 96
+PT V + + +RGRP+ S R T A C + ++V TRR++R GP
Sbjct: 1149 NPTNFNKVMKAANRGKGKRGRPRGSGRGRGRGTNAGCKVSTAVPRTTRRSTREGP 1203
>08_01_0876 - 8598664-8599374
Length = 236
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -2
Query: 212 WVRRGRPQSSRPYRHLLTAACPLLSSVGSPTRRASR*GPRPAELG 78
W + +S P R + A PLL +RR R G R G
Sbjct: 144 WAKEAAASASGPRRWTMDGAAPLLPETSPKSRRGRRGGRRSPRRG 188
>07_03_0991 + 23174743-23175726
Length = 327
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 149 GRRLLEDADRGDYSVVGPDEPTHIPTAAQLQPDVLDVCVHKGLRCPLTIEALYDL 313
GRR+ D DY + DE + P P L V + G R T+ L+ L
Sbjct: 73 GRRVTGDRTPADYDMEDGDEVSFFPDGTWTTPVTLTVTDNNGRRVTHTMRRLHIL 127
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/96 (21%), Positives = 41/96 (42%)
Frame = +2
Query: 245 DVLDVCVHKGLRCPLTIEALYDLGTPHLPILVTLGMGLTRVATSPLRPKVDWELFKRRLV 424
D + C+++ LR + A +L P ++ +T T+PL ++ K RL+
Sbjct: 165 DAIQFCIYEQLRIGYKVVAKRELNDPENALIGAFAGAITGAITTPL------DVMKTRLM 218
Query: 425 DLPAIQDPNTPEGVDDAAVRLVDSIRGAIDQATTLV 532
+TP G+ D +G+ +Q + +V
Sbjct: 219 VQNNTSFLSTPVGIADPIYFFGPQSQGSANQYSGIV 254
>01_03_0138 + 12963464-12965059,12965085-12965660
Length = 723
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 185 YSVVGPDEPTHIPTAAQLQPDVLDVCVHKGLRCPLTIEALYDLGTPHLPILVTLGMG 355
+ + PD + + T +L+ L + K LR L+ L D G+P+ V GMG
Sbjct: 255 WQMAAPDSDSLLATRPELRDLCLSYSLFKSLRRRLSGYPLADAGSPNALDFVLRGMG 311
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 174 SASSNSRLPTAEFSREPHATCFALRSPTSRAGRLS 70
+A S+S P A SR P C ALR S GRLS
Sbjct: 311 TAHSSSPAPAAVTSRRP---CMALREAGSNPGRLS 342
>08_02_0360 + 16196712-16197560,16198126-16198875
Length = 532
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 360 PGLRPRPYDRRSTGSSLRDA*STFPQFRTPTPLRGSTTRQSAL 488
PG+RP P RS SL T + R +P R TT + L
Sbjct: 309 PGVRPNPSRPRSVARSLSPRHVTRTKIRGDSPARRPTTGELGL 351
>01_04_0138 + 16554175-16554822
Length = 215
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 450 TPLRGSTTRQSALSTPSGERSTRRRLLCPAAGPEV 554
T RGS R++A+ +G+ TRR C AA V
Sbjct: 108 TMRRGSRRRKAAIGRRTGKSGTRRSRRCVAAAARV 142
>12_01_0900 -
8724339-8724380,8725263-8725376,8726491-8726559,
8726665-8726824,8726905-8726961,8728080-8728258,
8728332-8728442,8728512-8728535,8729993-8730107,
8730665-8730720,8731595-8731807
Length = 379
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 353 GLTRVATSPLRPKVDWELFKRRLVDLPAIQDPNTPEGVDDAAVRLVDSIRG 505
GL + TSP++ +V W +++ L I+ P P+ DAAV + ++RG
Sbjct: 75 GLAQHVTSPMQAQVTW--YRKLLAAYKDIKYP--PKESADAAVLVAATLRG 121
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 332 ILVTLGMGLTRVATSPLRPKVDWELF 409
+ T+ T TSP+ P+ DWELF
Sbjct: 294 VTTTMAAATTTTTTSPI-PRFDWELF 318
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 158 LLEDADRGDYSVVGPDEPTHIPTAAQLQPDVLDVCVHKGLRCPLTIEALYDLGTP 322
LL + D+ + S+V P PT + + ++Q C H ++ E +Y+L P
Sbjct: 430 LLNELDKEEKSMVPPVSPTVVDSIFRVQLSATISCSHCSYN-SVSHEVMYELSVP 483
>01_06_1535 + 38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 137 SVGSPTRRASR*GPRPAELGGCRNSGPVLCPRG 39
++G T R ++ RP GC SGPVL +G
Sbjct: 959 NLGMLTSRLAKYRTRPRVYVGCMKSGPVLSQKG 991
>01_01_0722 + 5639760-5640101
Length = 113
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 40 PRGHKTGPELRQPPSSAGRGPQREARRVGLPTELSS 147
P H PEL PP+++G QR+ R G T+ S+
Sbjct: 46 PEVHWAVPELPSPPTASGLHWQRDPRYGGGATDASA 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,019,837
Number of Sequences: 37544
Number of extensions: 501858
Number of successful extensions: 1813
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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