Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0009
(585 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 71 9e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 67 2e-11
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 67 2e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 62 5e-10
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 62 5e-10
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 62 5e-10
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 61 1e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 60 3e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 59 4e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 57 2e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 55 6e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 55 8e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 54 2e-07
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 54 2e-07
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 54 2e-07
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 54 2e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 51 1e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 47 2e-05
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 40 0.003
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 38 0.008
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 38 0.008
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 34 0.16
AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p pro... 29 0.85
AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA... 29 0.85
AY122174-1|AAM52686.1| 877|Drosophila melanogaster LD34142p pro... 31 1.1
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA... 31 1.1
AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB... 31 1.1
M83931-1|AAB04680.1| 1595|Drosophila melanogaster son of sevenle... 30 2.0
M77501-1|AAA28904.1| 1596|Drosophila melanogaster son of sevenle... 30 2.0
BT015294-1|AAT94523.1| 1596|Drosophila melanogaster GH01796p pro... 30 2.0
AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p pro... 30 2.0
AL031863-1|CAA21315.1| 526|Drosophila melanogaster EG:EG0003.1 ... 30 2.0
AE014134-2404|AAF53336.2| 1596|Drosophila melanogaster CG7793-PA... 30 2.0
AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA... 30 2.0
AY058772-1|AAL14001.1| 385|Drosophila melanogaster SD05480p pro... 28 8.1
AY051912-1|AAK93336.1| 801|Drosophila melanogaster LD39933p pro... 28 8.1
AE014134-2350|AAF53302.2| 800|Drosophila melanogaster CG7110-PB... 28 8.1
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 71.3 bits (167), Expect = 9e-13
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Frame = +2
Query: 38 HPGDIRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPDEPTH 217
H DI R C R L+ GD NA+H WG NS GR L E ++ PT
Sbjct: 121 HFTDIIRA--CGQR-YLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTR 177
Query: 218 IPTAAQLQPDVLDVCVHKGLRCPL-TIEALYDLGTPHLPILVTLGMGLTRVATSP--LRP 388
P P +D V+ G+ L TI +DL + HLP+++++ T V SP +
Sbjct: 178 YPYVPSHTPSCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTK 237
Query: 389 KVDWELFKRRLVDLPAIQDP-NTPEGVDDAAVRLVDSIRGAIDQATTLVPSGG 544
D F R+L L ++ N+ E ++ A L +SI A +T+ VP G
Sbjct: 238 HTDLLAFSRQLESLISLNTTLNSGEEIEMAVDNLTESIHRAAAVSTSPVPRIG 290
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPDEPTHIPTAAQLQPDVLDVCV 265
L+ GD N++H AW + G+ L E +D G +S++ P +PT+IP + + LD+C+
Sbjct: 157 LICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLCL 216
Query: 266 HKGLRCPLTIEALYDLGTPHLPILVTLGMGLTR-VATSPLRPKVDWELFKR 415
+ +L + HLP+++ R V T P+ + +W LFKR
Sbjct: 217 TNIPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYPILGRANWALFKR 267
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPDEPTHIPTAAQLQPDVLDVCV 265
L+ GD N++H AW + G+ L E +D G +S++ P +PT+IP + + LD+C+
Sbjct: 105 LICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLCL 164
Query: 266 HKGLRCPLTIEALYDLGTPHLPILVTLGMGLTR-VATSPLRPKVDWELFKR 415
+ +L + HLP+++ R V T P+ + +W LFKR
Sbjct: 165 TNIPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYPILGRANWALFKR 215
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 62.1 bits (144), Expect = 5e-10
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLED-ADRGDYSVVGPDEPTHIPTAAQLQPDVLDVC 262
+L GD N KH WG+ L+ A GR L + R D +V TH P + QP LD
Sbjct: 153 ILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFA 212
Query: 263 VHKGLRC-PLTIEALYDLGTPHLPILVTL-----GMGLTRVATSPLRPKVDWELFKRRLV 424
+ KG L + +L + HLPI + L + + ++ + D FK+ L
Sbjct: 213 ICKGFHTQKLKTYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLE 272
Query: 425 DLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQAT 523
+ + + T + +DD L+++I+ A ++AT
Sbjct: 273 NKILLNTEIRTGQDIDDCIDILINNIKSAANEAT 306
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 62.1 bits (144), Expect = 5e-10
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLED-ADRGDYSVVGPDEPTHIPTAAQLQPDVLDVC 262
+L GD N KH WG+ L+ A GR L + R D +V TH P + QP LD
Sbjct: 153 ILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFA 212
Query: 263 VHKGLRC-PLTIEALYDLGTPHLPILVTL-----GMGLTRVATSPLRPKVDWELFKRRLV 424
+ KG L + +L + HLPI + L + + ++ + D FK+ L
Sbjct: 213 ICKGFHTQKLKTYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLE 272
Query: 425 DLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQAT 523
+ + + T + +DD L+++I+ A ++AT
Sbjct: 273 NKILLNTEIRTGQDIDDCIDILINNIKSAANEAT 306
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 62.1 bits (144), Expect = 5e-10
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLED-ADRGDYSVVGPDEPTHIPTAAQLQPDVLDVC 262
+L GD N KH WG+ L+ A GR L + R D +V TH P + QP LD
Sbjct: 153 ILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFA 212
Query: 263 VHKGLRC-PLTIEALYDLGTPHLPILVTL-----GMGLTRVATSPLRPKVDWELFKRRLV 424
+ KG L + +L + HLPI + L + + ++ + D FK+ L
Sbjct: 213 ICKGFHTQKLKTYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLE 272
Query: 425 DLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQAT 523
+ + + T + +DD L+++I+ A ++AT
Sbjct: 273 NKILLNTEIRTGQDIDDCIDILINNIKSAANEAT 306
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 60.9 bits (141), Expect = 1e-09
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSV--VGPDEPTHIPTAAQLQPDVLDV 259
+ GD NAKH WGSRL S G++L + + + V P +PT+ P + PD++D
Sbjct: 132 IAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDF 191
Query: 260 CVHKGL-RCPLTIEALYDLGTPHLPILVTLGMGLTRVATSPLRP---KVDWELFKRRLVD 427
+ K + R +T EAL DL + H P+ + + + + P R + +W +++ +
Sbjct: 192 AITKHVPRNMVTAEALADLSSDHSPVFLNM-LTRPHIVDPPYRLTNFRTNWPRYQKYVCS 250
Query: 428 -LPAIQDPNTPEGVDDAAVRLVDSIRGAIDQATTLVPSGGPRGI 556
+ +T E +D + L + + A +T V P I
Sbjct: 251 HIELTTALSTKEDIDKSTETLENILVSAAKASTPPVTYAKPNYI 294
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 59.7 bits (138), Expect = 3e-09
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSV--VGPDEPTHIPTAAQLQPDVLDV 259
+ GD NAKH WGSRL + G++L + + + V P +PT+ P + PD++D
Sbjct: 132 IAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDF 191
Query: 260 CVHKGL-RCPLTIEALYDLGTPHLPILVTLGMGLTR--VATSPLRP---KVDWELFKRRL 421
+ K + R +T EAL DL + H P+ + + LTR + P R + +W +++ +
Sbjct: 192 AITKHVPRNMVTAEALADLSSDHSPVFLNM---LTRHHIVDPPYRLTNFRTNWPRYQKYV 248
Query: 422 VD-LPAIQDPNTPEGVDDAAVRLVDSIRGAIDQATTLVPSGGPRGI 556
+ +T E +D + L + + A +T V P I
Sbjct: 249 CSHIELTTALSTKEDIDKSTETLENILVSAAKASTPPVTYAKPNYI 294
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 59.3 bits (137), Expect = 4e-09
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSV--VGPDEPTHIPTAAQLQPDVLDV 259
+ GD NAKH WGSRL + G++L + + + V P PT+ P+ PD++D
Sbjct: 133 IAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLIDF 192
Query: 260 CVHKGL-RCPLTIEALYDLGTPHLPILVTLGMGLTRV--ATSPLRPKVDWELFKR 415
V K + R + E L DL + H P+L+ L V T K +W +K+
Sbjct: 193 AVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENVKPPTRLTSSKTNWLRYKK 247
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 57.2 bits (132), Expect = 2e-08
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVG 199
PP + + + +L ++ GD NA H WG+ ++ G L + +
Sbjct: 111 PPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLA 170
Query: 200 PDEPTHIPTAAQLQPDVLDVCVHKG-LRCPLTIEALYDLGTPHLPILVTLGMGLTRVATS 376
PT P + P +D + KG L I A+ +L + HLP+++TL G
Sbjct: 171 TGGPTRYPYGCRGSPGYIDFALTKGVLGIHANISAVVELSSDHLPLVITLDAGAISYPKM 230
Query: 377 P--LRPKVDWELFKRRLVD-LPAIQDPNTPEGVDDAAVRLVDSIRGAIDQAT 523
+ + + E+F+ +L LP N+ + VDDA L ++I+ A AT
Sbjct: 231 ERLITRRTNLEVFQSQLESTLPLNTAINSGQDVDDAIELLTNNIKSAARLAT 282
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 55.2 bits (127), Expect = 6e-08
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVG 199
PP + D + + + GD NAKH WG+ + G+ L E G Y V+
Sbjct: 112 PPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLA 171
Query: 200 PDEPTHIPTAAQLQPDVLDVCVHKGLRC-PLTIEALYDLGTPHLPILVTL 346
EPT L P LD + G L ++ L +L + HLPIL L
Sbjct: 172 TGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTLQELSSDHLPILAVL 221
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.8 bits (126), Expect = 8e-08
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPA------LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRG 181
PP + P VLN + +L GD NAKH WG G L E
Sbjct: 121 PPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQAD 180
Query: 182 DYS-VVGPDEPTHIPTAAQLQPDVLDVCVHKGL-RCPLTIEALYDLGTPHLPILVTLGMG 355
+ ++ TH P + P +D + KGL R I ++ DL + HLPIL+ + +
Sbjct: 181 PMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLPILLEINLD 240
Query: 356 -----LTRVATSPLRPKVDWELFKRRLVDLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQ 517
L + + L+ + ELFK L + + E ++DA + +I+ + D+
Sbjct: 241 TSTLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADE 300
Query: 518 AT 523
+T
Sbjct: 301 ST 302
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 53.6 bits (123), Expect = 2e-07
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPA------LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRG 181
PP + P VLN + +L GD NAKH WG G L E
Sbjct: 5 PPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQAD 64
Query: 182 DYS-VVGPDEPTHIPTAAQLQPDVLDVCVHKGL-RCPLTIEALYDLGTPHLPILVTLGMG 355
+ ++ TH P + P +D + KGL R I + DL + HLPIL+ + +
Sbjct: 65 PMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLD 124
Query: 356 -----LTRVATSPLRPKVDWELFKRRLVDLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQ 517
L + + L+ + ELFK L + + E ++DA + +I+ + D+
Sbjct: 125 TSTLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADE 184
Query: 518 AT 523
+T
Sbjct: 185 ST 186
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 53.6 bits (123), Expect = 2e-07
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPA------LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRG 181
PP + P VLN + +L GD NAKH WG G L E
Sbjct: 121 PPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQAD 180
Query: 182 DYS-VVGPDEPTHIPTAAQLQPDVLDVCVHKGL-RCPLTIEALYDLGTPHLPILVTLGMG 355
+ ++ TH P + P +D + KGL R I + DL + HLPIL+ + +
Sbjct: 181 PMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLD 240
Query: 356 -----LTRVATSPLRPKVDWELFKRRLVDLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQ 517
L + + L+ + ELFK L + + E ++DA + +I+ + D+
Sbjct: 241 TSTLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADE 300
Query: 518 AT 523
+T
Sbjct: 301 ST 302
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 53.6 bits (123), Expect = 2e-07
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPA------LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRG 181
PP + P VLN + +L GD NAKH WG G L E
Sbjct: 83 PPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQAD 142
Query: 182 DYS-VVGPDEPTHIPTAAQLQPDVLDVCVHKGL-RCPLTIEALYDLGTPHLPILV----- 340
+ ++ TH P + P +D + KGL R I + DL + HLPIL+
Sbjct: 143 PMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLD 202
Query: 341 TLGMGLTRVATSPLRPKVDWELFKRRLVDLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQ 517
T + L + + L+ + ELFK L + + E ++DA + +I+ + D+
Sbjct: 203 TSNLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADE 262
Query: 518 AT 523
+T
Sbjct: 263 ST 264
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 53.6 bits (123), Expect = 2e-07
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPA------LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRG 181
PP + P VLN + +L GD NAKH WG G L E
Sbjct: 121 PPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQAD 180
Query: 182 DYS-VVGPDEPTHIPTAAQLQPDVLDVCVHKGL-RCPLTIEALYDLGTPHLPILV----- 340
+ ++ TH P + P +D + KGL R I + DL + HLPIL+
Sbjct: 181 PMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLD 240
Query: 341 TLGMGLTRVATSPLRPKVDWELFKRRLVDLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQ 517
T + L + + L+ + ELFK L + + E ++DA + +I+ + D+
Sbjct: 241 TSNLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADE 300
Query: 518 AT 523
+T
Sbjct: 301 ST 302
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 50.8 bits (116), Expect = 1e-06
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Frame = +2
Query: 86 LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYS-VVGPDEPTHIPTAAQLQPDVLDVC 262
+L GD NAKH WG G L E + ++ TH P + P +D
Sbjct: 149 ILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFS 208
Query: 263 VHKGL-RCPLTIEALYDLGTPHLPILVTLGMG-----LTRVATSPLRPKVDWELFKRRLV 424
+ KGL R I + DL + HLPIL+ + + L + + L+ + ELFK+ L
Sbjct: 209 ICKGLGRFEKRISSGADLSSDHLPILLEINLDTNTLFLQKQNNNILKKNTNIELFKKVLE 268
Query: 425 DLPAIQ-DPNTPEGVDDAAVRLVDSIRGAIDQAT 523
+ + E ++DA + +I+ + ++T
Sbjct: 269 RKILLNTEIRVAEDINDAISTFMKNIKDSAAEST 302
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 47.2 bits (107), Expect = 2e-05
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPA------LLVGDLNAKHVAWGSRLNSAVGRRLLEDADRG 181
PP + P VLN + +L GD NAKH WG + + L DA +
Sbjct: 133 PPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGC-IRACQRGAALYDAIQA 191
Query: 182 D--YSVVGPDEPTHIPTAAQLQPDVLDVCVHKGL-RCPLTIEALYDLGTPHLPILVTLGM 352
D +V TH P + P +D + K L R I + L + HLPIL+ + +
Sbjct: 192 DSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLPILLEINL 251
Query: 353 GLTRVA-----TSPLRPKVDWELFKRRLVDLPAIQ-DPNTPEGVDDAAVRLVDSIRGAID 514
+ ++ + L+ + ELFK L + + E ++DA + +I+ +
Sbjct: 252 DIKTISLQKQNNNILKKTTNIELFKNVLERKILLNTEIRVAEDINDAINIFIKNIKDSAA 311
Query: 515 QAT 523
++T
Sbjct: 312 EST 314
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 39.5 bits (88), Expect = 0.003
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVG 199
PP F DI +L + +L+GDLN+ WGS + G+++ V+
Sbjct: 109 PPSQIFSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLN 168
Query: 200 PDEPTHIPTAAQL-QPDVLDVCVHKGLRCPLTI-EALYDLGTPHLPILVTLGMGLTRVAT 373
PTH+ T D+ + C +I + L+ G+ H PI + + T
Sbjct: 169 DGSPTHLSTHNTFTHIDISLISPQIAHMCSWSISDNLH--GSDHFPITIHINTPTRPDNT 226
Query: 374 SPL-RPKVDWELFKR 415
PL + K D +KR
Sbjct: 227 LPLPKYKTDQANWKR 241
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 20 PPGPDFHPGDIRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVG 199
PP + D + + + GD NAKH WG+ + G+ L E G Y V+
Sbjct: 112 PPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLA 171
Query: 200 PDEPT 214
EPT
Sbjct: 172 TGEPT 176
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 38.3 bits (85), Expect = 0.008
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +2
Query: 50 IRRVLNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPDEPTHIPTA 229
+ N P+L+ GD N H WGS + G+ D ++ PTH T
Sbjct: 115 LHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTH 174
Query: 230 AQLQPDVLDVCVHKGLRCPLTIEALYDL-GTPHLPILVTL 346
L +C L + L DL G+ H PI+ TL
Sbjct: 175 NTYTHIDLTLC-SPILAPHAKWKILNDLHGSDHFPIITTL 213
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 77 RPALLVGDLNAKHVAWGSRLNSAVGRRLLE 166
RP ++ GDLNA WGSR+++ GR +++
Sbjct: 118 RPTVIGGDLNAWATEWGSRISNTRGRAVID 147
>AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p
protein.
Length = 1193
Score = 28.7 bits (61), Expect(2) = 0.85
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 310 PGYPPSPYPGHTGNGAHPGCDLAP 381
PGYPP P G G PG + P
Sbjct: 382 PGYPPQPGAGFPGQPGRPGFNQPP 405
Score = 21.4 bits (43), Expect(2) = 0.85
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 PARRVGCVRS*GATVPLNY*GTVRPGYPPSP 330
P ++ GA P Y G +PGYPP P
Sbjct: 335 PGQQAAAPPQFGAPQP-GYPGQ-QPGYPPQP 363
>AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA
protein.
Length = 1193
Score = 28.7 bits (61), Expect(2) = 0.85
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 310 PGYPPSPYPGHTGNGAHPGCDLAP 381
PGYPP P G G PG + P
Sbjct: 382 PGYPPQPGAGFPGQPGRPGFNQPP 405
Score = 21.4 bits (43), Expect(2) = 0.85
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 PARRVGCVRS*GATVPLNY*GTVRPGYPPSP 330
P ++ GA P Y G +PGYPP P
Sbjct: 335 PGQQAAAPPQFGAPQP-GYPGQ-QPGYPPQP 363
>AY122174-1|AAM52686.1| 877|Drosophila melanogaster LD34142p
protein.
Length = 877
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 271 GATVPLNY*GTVRPGYPPSPYPGHTGNGAHPGCDLAP 381
G++VP + G PP PY H G+G +PG P
Sbjct: 356 GSSVPNGPMSPMENGPPPPPYLRHNGSGYNPGAPPPP 392
>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
isoform A protein.
Length = 2061
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 271 GATVPLNY*GTVRPGYPPSPYPGHTGNGAHPGCDLAP 381
G++VP + G PP PY H G+G +PG P
Sbjct: 1540 GSSVPNGPMSPMENGPPPPPYLRHNGSGYNPGAPPPP 1576
>AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB,
isoform B protein.
Length = 2103
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 271 GATVPLNY*GTVRPGYPPSPYPGHTGNGAHPGCDLAP 381
G++VP + G PP PY H G+G +PG P
Sbjct: 1582 GSSVPNGPMSPMENGPPPPPYLRHNGSGYNPGAPPPP 1618
>M83931-1|AAB04680.1| 1595|Drosophila melanogaster son of sevenless
protein protein.
Length = 1595
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 297 RHCTTWVPPISLSWSHWEWGSPGLRPRPYDRRSTGSSLRDA*ST 428
R C T VP W H SPG++PR ++ ++ S L ++ S+
Sbjct: 1065 RGCKT-VPKFPRKWPHIPLKSPGIKPRRQNQTNSSSKLSNSTSS 1107
>M77501-1|AAA28904.1| 1596|Drosophila melanogaster son of sevenless
protein.
Length = 1596
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 297 RHCTTWVPPISLSWSHWEWGSPGLRPRPYDRRSTGSSLRDA*ST 428
R C T VP W H SPG++PR ++ ++ S L ++ S+
Sbjct: 1066 RGCKT-VPKFPRKWPHIPLKSPGIKPRRQNQTNSSSKLSNSTSS 1108
>BT015294-1|AAT94523.1| 1596|Drosophila melanogaster GH01796p protein.
Length = 1596
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 297 RHCTTWVPPISLSWSHWEWGSPGLRPRPYDRRSTGSSLRDA*ST 428
R C T VP W H SPG++PR ++ ++ S L ++ S+
Sbjct: 1066 RGCKT-VPKFPRKWPHIPLKSPGIKPRRQNQTNSSSKLSNSTSS 1108
>AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p
protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 255 SNTSGWSCAAVGMCVGSSGPTTE*SPLSASSNSRLPTAEFSREPHATCFALRSPTSRAG 79
S+ SG+S + + S+GP + SP ASS++ L + H+ A +P+ +G
Sbjct: 222 SSASGYSHYSKTSSISSNGPCSPASPAVASSSNHLAPPSPTTHHHSHSLASPTPSGSSG 280
>AL031863-1|CAA21315.1| 526|Drosophila melanogaster EG:EG0003.1
protein.
Length = 526
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 255 SNTSGWSCAAVGMCVGSSGPTTE*SPLSASSNSRLPTAEFSREPHATCFALRSPTSRAG 79
S+ SG+S + + S+GP + SP ASS++ L + H+ A +P+ +G
Sbjct: 140 SSASGYSHYSKTSSISSNGPCSPASPAVASSSNHLAPPSPTTHHHSHSLASPTPSGSSG 198
>AE014134-2404|AAF53336.2| 1596|Drosophila melanogaster CG7793-PA
protein.
Length = 1596
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 297 RHCTTWVPPISLSWSHWEWGSPGLRPRPYDRRSTGSSLRDA*ST 428
R C T VP W H SPG++PR ++ ++ S L ++ S+
Sbjct: 1066 RGCKT-VPKFPRKWPHIPLKSPGIKPRRQNQTNSSSKLSNSTSS 1108
>AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA
protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 255 SNTSGWSCAAVGMCVGSSGPTTE*SPLSASSNSRLPTAEFSREPHATCFALRSPTSRAG 79
S+ SG+S + + S+GP + SP ASS++ L + H+ A +P+ +G
Sbjct: 222 SSASGYSHYSKTSSISSNGPCSPASPAVASSSNHLAPPSPTTHHHSHSLASPTPSGSSG 280
>AY058772-1|AAL14001.1| 385|Drosophila melanogaster SD05480p
protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 62 LNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPD 205
L C + AL + ++KH+ S E+ DRGD+ PD
Sbjct: 34 LRCQRKLALKLKQKDSKHIGENGEKPSEDSEESKEEQDRGDFREEDPD 81
>AY051912-1|AAK93336.1| 801|Drosophila melanogaster LD39933p
protein.
Length = 801
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 62 LNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPD 205
L C + AL + ++KH+ S E+ DRGD+ PD
Sbjct: 474 LRCQRKLALKLKQKDSKHIGENGEKPSEDSEESKEEQDRGDFREEDPD 521
>AE014134-2350|AAF53302.2| 800|Drosophila melanogaster CG7110-PB
protein.
Length = 800
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 62 LNCDSRPALLVGDLNAKHVAWGSRLNSAVGRRLLEDADRGDYSVVGPD 205
L C + AL + ++KH+ S E+ DRGD+ PD
Sbjct: 474 LRCQRKLALKLKQKDSKHIGENGEKPSEDSEESKEEQDRGDFREEDPD 521
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,706,499
Number of Sequences: 53049
Number of extensions: 790572
Number of successful extensions: 2833
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2797
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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