Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0039
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 189 2e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 189 2e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 189 2e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 189 2e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 189 2e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 189 2e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 189 2e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 189 2e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 189 2e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 189 2e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 184 4e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 128 4e-30
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 115 2e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 115 2e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 114 5e-26
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 114 5e-26
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 108 4e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 70 1e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.008
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.86
AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical ... 29 2.0
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 2.6
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 29 2.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.6
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 166
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVTHTVPI 166
Score = 114 bits (274), Expect = 5e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 166
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 166
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 166
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVTHTVPI 166
Score = 112 bits (270), Expect = 2e-25
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 166
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 122
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 152
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 148 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 39
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD-GVTHTVPI 166
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 184 bits (448), Expect = 4e-47
Identities = 83/91 (91%), Positives = 86/91 (94%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQA 509
APLNPK+NREKMTQIMFETFNTPAMYV IQA
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQA 138
Score = 109 bits (261), Expect = 2e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 35.1 bits (77), Expect = 0.040
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLD 556
+VLSLYASGRTTGIVLD
Sbjct: 138 AVLSLYASGRTTGIVLD 154
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 128 bits (308), Expect = 4e-30
Identities = 62/126 (49%), Positives = 85/126 (67%), Gaps = 2/126 (1%)
Frame = +3
Query: 237 GTEG-LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 410
G +G + +G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 411 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCP 590
T+APLNP NRE+ +I FETFN PA+Y+ +QA SGD G+ H P
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGD-GVTHAVP 168
Query: 591 ILRKGF 608
I+ KGF
Sbjct: 169 IV-KGF 173
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 234
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 350
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 350
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 114 bits (274), Expect = 5e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 350
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 114 bits (274), Expect = 5e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDM 341
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 108 bits (259), Expect = 4e-24
Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 222 RDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 398
R G + L+VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 399 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLP 578
+LLTE PLNP +NREKM Q+MFE + ++YVA+QA + SGD G+
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGD-GVT 164
Query: 579 HPCPILRKGF 608
H CP+ +GF
Sbjct: 165 HICPVY-EGF 173
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 VGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 431
+GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 67 IGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNT 126
Query: 432 KANREKMTQIMFETFNTPAMYVAIQA 509
NRE +IMFE+FN P +Y+A+QA
Sbjct: 127 PENREYTAEIMFESFNVPGLYIAVQA 152
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 201
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +3
Query: 306 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 485
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 486 AMYVAIQACSRC 521
A Y++ C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 201
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 261 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 440
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 441 REKMTQIMFETF 476
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 261 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 440
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 441 REKMTQIMFETF 476
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -1
Query: 355 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPTKSPSVPYRPSRPDG 212
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical
protein ZK6.7b protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 612 GGIPFVKWGTGVEDPRRRKSSTIPVVRPDAYSES---TLGW 499
GG+P WGT + +S+T+P+ R ++ + +GW
Sbjct: 301 GGVPAYDWGTKTNKKKYGQSTTLPLSREPRFTSTGVMPIGW 341
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 470 NIQHARHVRRHPSVLSLYASGRTTGIVLDFRRRGSSTPVP 589
N Q+ H HP +S YASGR+ + L RG +P
Sbjct: 446 NRQYRVHTAMHPIAISDYASGRSVYLHLQSLPRGRYLLIP 485
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 198 RGKAPPSGRDGRYGTEGLLVGDEAQSKRG 284
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 470 NIQHARHVRRHPSVLSLYASGRTTGIVLDFRRRGSSTPVP 589
N Q+ H HP +S YASGR+ + L RG +P
Sbjct: 446 NRQYRVHTAMHPIAISDYASGRSVYLHLQSLPRGRYLLIP 485
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 377 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 502
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 173 ASSPAKPALHIPEPLSTTNAATSS 102
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 377 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 502
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 173 ASSPAKPALHIPEPLSTTNAATSS 102
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 377 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 502
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 173 ASSPAKPALHIPEPLSTTNAATSS 102
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 377 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 502
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 173 ASSPAKPALHIPEPLSTTNAATSS 102
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 491 VRRHPSVLSLYASGRTTGIVLDFRRRGSSTPV 586
+ R PS++ LYA TTG+V+D R + PV
Sbjct: 307 ITRQPSLI-LYAYDVTTGVVVDIGERVNIVPV 337
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 148 KAGFAGDDAPRAVFPSIVGRPRHQG 222
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,279,035
Number of Sequences: 27780
Number of extensions: 385181
Number of successful extensions: 1530
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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