BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0039
(616 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 25 0.59
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 1.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 1.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 23 1.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 1.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 1.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.4
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 2.4
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 2.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 5.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 5.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 5.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 5.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.5
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 7.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.6
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.6
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 25.0 bits (52), Expect = 0.59
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 294 GSGYLFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISC 160
GS Y+ VP RVLL+ TD + S D E+G +C
Sbjct: 329 GSNYMQTRVPAWCDRVLLNPTDKMLVQDISSPDAVEYGIIGPTTC 373
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 286 IPLLLCASSPTKSPSVPYRPSRPDGGAFPRSRGTR 182
+P+ + A+ PT YR PDG P T+
Sbjct: 265 LPVGVTAAIPTSENPADYRYFCPDGSKVPIDANTK 299
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 286 IPLLLCASSPTKSPSVPYRPSRPDGGAFPRSRGTR 182
+P+ + A+ PT YR PDG P T+
Sbjct: 265 LPVGVTAAIPTSENPADYRYFCPDGSKVPIDANTK 299
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 489 MYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPC--PILRKGFR 611
MY+ C C P V V W +PC + K FR
Sbjct: 28 MYLVRAFCRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFR 70
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 286 IPLLLCASSPTKSPSVPYRPSRPDGGAFPRSRGTR 182
+P+ + A+ PT YR PDG P T+
Sbjct: 265 LPVGVTAAIPTSENPADYRYFCPDGSKVPIDANTK 299
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 489 MYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPC--PILRKGFR 611
MY+ C C P V V W +PC + K FR
Sbjct: 476 MYLVRAFCRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFR 518
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 375 LRVAPEEHPVLLTEAPLNPKANREKM 452
LR+ P H V+ T +NP + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 204 KAPPSGRDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDD 338
K P G G G + +L E KRG++ + ++ T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 204 KAPPSGRDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDD 338
K P G G G + +L E KRG++ + ++ T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 472 HSTRPPCTSPSKRALA 519
H T PP SPS +A A
Sbjct: 674 HLTSPPARSPSSQAQA 689
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 141 FRHIGPSTPFPRF---IPP 156
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 141 FRHIGPSTPFPRF---IPP 156
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 141 FRHIGPSTPFPRF---IPP 156
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 141 FRHIGPSTPFPRF---IPP 156
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 141 FRHIGPSTPFPRF---IPP 156
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 152 FRHIGPSTPFPRF---IPP 167
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 152 FRHIGPSTPFPRF---IPP 167
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 152 FRHIGPSTPFPRF---IPP 167
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 152 FRHIGPSTPFPRF---IPP 167
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 144 FRHIGPSTPFPRF---IPP 159
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 144 FRHIGPSTPFPRF---IPP 159
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 144 FRHIGPSTPFPRF---IPP 159
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 144 FRHIGPSTPFPRF---IPP 159
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPQF---IPP 165
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 150 FRHIGPSTPFPRF---IPP 165
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 147 FRHIGPSTPFPRF---IPP 162
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 147 FRHIGPSTPFPRF---IPP 162
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 147 FRHIGPSTPFPRF---IPP 162
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 147 FRHIGPSTPFPRF---IPP 162
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 153 FRHIGPSTPFPRF---IPP 168
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 392 FRHIGPSTPFPRF---IPP 407
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 557 FRRRGSSTPVPHFTKGIPP 613
FR G STP P F IPP
Sbjct: 377 FRHIGPSTPFPRF---IPP 392
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 139 GMCKAGFAGD 168
GMCK G +GD
Sbjct: 130 GMCKEGISGD 139
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = -2
Query: 615 SGGIPFVKWGTGVEDPRRRKSSTIPV 538
+G P +++ G+ P+R +T+P+
Sbjct: 292 TGYYPTMRFRNGLAFPQRETGATVPL 317
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = -2
Query: 615 SGGIPFVKWGTGVEDPRRRKSSTIPV 538
+G P +++ G+ P+R +T+P+
Sbjct: 292 TGYYPTMRFRNGLAFPQRETGATVPL 317
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 198 DRGEHGARSIISCETGLA 145
D GEH ++ E GLA
Sbjct: 130 DPGEHNGDTVTDVEAGLA 147
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 198 DRGEHGARSIISCETGLA 145
D GEH ++ E GLA
Sbjct: 125 DPGEHNGDTVTDVEAGLA 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,162
Number of Sequences: 438
Number of extensions: 4950
Number of successful extensions: 46
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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