Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0035
(392 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 99 1e-21
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 99 1e-21
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 98 2e-21
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 98 2e-21
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 98 2e-21
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 98 2e-21
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 96 7e-21
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 96 7e-21
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 96 7e-21
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 89 8e-19
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 64 3e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 56 9e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 56 1e-08
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 55 2e-08
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 44 4e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 36 0.013
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 34 0.040
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 30 0.49
At3g03720.1 68416.m00377 amino acid permease family protein simi... 29 1.1
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 1.5
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 1.5
At2g17480.1 68415.m02019 seven transmembrane MLO family protein ... 29 1.5
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 2.6
At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identi... 27 4.5
At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identi... 27 4.5
At5g02830.1 68418.m00225 pentatricopeptide (PPR) repeat-containi... 27 6.0
At5g36940.1 68418.m04430 amino acid permease family protein simi... 26 7.9
At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger) fa... 26 7.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 96.3 bits (229), Expect = 7e-21
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+ +NWDDM
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDM 84
Score = 57.6 bits (133), Expect = 3e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+++ +V DNG+GM KAGFAG DAPRAVFPS+VG P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 96.3 bits (229), Expect = 7e-21
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+ +NWDDM
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDM 84
Score = 57.6 bits (133), Expect = 3e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+++ +V DNG+GM KAGFAG DAPRAVFPS+VG P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 96.3 bits (229), Expect = 7e-21
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+ +NWDDM
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDM 84
Score = 57.6 bits (133), Expect = 3e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+++ +V DNG+GM KAGFAG DAPRAVFPS+VG P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 89.4 bits (212), Expect = 8e-19
Identities = 35/47 (74%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH+GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+ +NWDDM
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDM 85
Score = 59.7 bits (138), Expect = 7e-10
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIR 268
+E A+V DNG+GM KAGFAG DAPRAVFPS+VG P R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHR 44
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 64.1 bits (149), Expect = 3e-11
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = +1
Query: 274 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
MVGM + D +VGD+A+++ GILTL YP+EHG+ +NWDDM
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDM 39
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 56.0 bits (129), Expect = 9e-09
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGS 256
+EV+A+VVD GS CKAG+AG DAP+AVFPS+VG+
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGA 39
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGS 256
+EV+A+VVD GS CKAG+AG DAP+AVFPS++G+
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGA 39
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 301 YVGDEAQS-KRGILTLKYPIEHGIATNWD 384
YVG +A S +R + + PI+ GI ++WD
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWD 104
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 54.8 bits (126), Expect = 2e-08
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 280 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+ +SYVG+E + R ILTLK P+EHGI NWDDM
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDM 73
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+V D G GM +AGFAG +AP+ VFP +VG P
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRP 34
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIR 268
+V DNG+G K GFAG + P +VFP +VG P +R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLR 40
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 250 GKP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+P R++ ++ KD VG+ R L + YP+ +GI NWDDM
Sbjct: 35 GRPLLRYEESLMEQQVKDIVVGETCSELRHQLDINYPVHNGIVQNWDDM 83
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 35.5 bits (78), Expect = 0.013
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 295 DSYVGDEAQSK-RGILT--LKYPIEHGIATNWDDM 390
D Y+GDEA +K R T L YPIEHG +WD M
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAM 101
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 164 ALVVDNGSGMCKAGFAGYDAPRAVFPSIV 250
A+V+DNG+G K GFAG P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 33.9 bits (74), Expect = 0.040
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIRA 271
+V+DNG+ + G+AG PR VF +IV P +A
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKA 56
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+V+DNG G+ KAG G P V P+ + P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g03720.1 68416.m00377 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 600
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFP 241
++V G CK G+ GYD P FP
Sbjct: 198 IIVVGGYLACKTGWVGYDLPSGYFP 222
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.7 bits (61), Expect = 1.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 164 ALVVDNGSGMCKAGFAGYDAP 226
++++D GSG CK G++ Y +P
Sbjct: 135 SIIIDGGSGYCKFGWSKYASP 155
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.7 bits (61), Expect = 1.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 164 ALVVDNGSGMCKAGFAGYDAP 226
++++D GSG CK G++ Y +P
Sbjct: 135 SIIIDGGSGYCKFGWSKYASP 155
>At2g17480.1 68415.m02019 seven transmembrane MLO family protein /
MLO-like protein 8 (MLO8) identical to membrane protein
Mlo8 [Arabidopsis thaliana] gi|14091586|gb|AAK53801;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 593
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 300 RVLLSHTDHHALMAGLPTIEGN 235
R+ L TD HA++ G+P ++GN
Sbjct: 355 RMALGITDRHAVVQGMPLVQGN 376
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 390 HVIPVSGDSVFDGVFEGQDTSFALCLISYIRVLLSH 283
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 522
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 256 ASHDRGK----HCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCDKMKI 95
A +D GK C+R + CE +G Y N AH E V++ R + KI
Sbjct: 209 AGYDLGKKAPGRCSRYVPGCEDREGQSGKEAYLVSHNLLNAHAEAVEVFRQKVKGGKI 266
>At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 524
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 256 ASHDRGK----HCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCDKMKI 95
A +D GK C+R + CE +G Y N AH E V++ R + KI
Sbjct: 211 AGYDLGKKAPGRCSRYVPGCEDREGQSGKEAYLVSHNLLNAHAEAVEVFRQKVKGGKI 268
>At5g02830.1 68418.m00225 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 852
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Frame = -3
Query: 285 HTDHHALMAGLPTIEGNTARGASY----PAKPALHIPEPLSTTNAATSSSHILN 136
H H A P T +S+ P+ P H P P S + + SSH N
Sbjct: 18 HHHHRRCYATAPESNRKTKSNSSFTKLLPSLPQQHSPSPASVSATHSLSSHFSN 71
>At5g36940.1 68418.m04430 amino acid permease family protein similar
to SP|Q09143 High-affinity cationic amino acid
transporter-1 (CAT-1) {Mus musculus}; contains Pfam
profile PF00324: Amino acid permease
Length = 609
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 158 VAALVVDNGSGMC-KAGFAGYDAPRAVFP 241
V V+ GS +C K G+ GY+ P FP
Sbjct: 199 VMIFVIVAGSYLCFKTGWVGYELPTGYFP 227
>At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 212
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 378 VSGDSVFDGVFEGQDTSFALCLISYI 301
V+GD DG EG++T+ ++CL Y+
Sbjct: 121 VNGDGFHDG--EGRETTCSICLCEYM 144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,530,314
Number of Sequences: 28952
Number of extensions: 211047
Number of successful extensions: 613
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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