Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0028
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 38 0.009
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 35 0.062
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 32 0.44
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 31 1.0
06_01_0675 + 4937309-4937354,4937606-4937718,4937810-4937905,493... 31 1.0
01_01_0552 - 4065623-4065698,4066133-4066218 30 1.3
04_04_1591 + 34647817-34648416 29 2.3
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224... 29 2.3
01_06_0802 + 32087661-32087965,32088106-32088220,32088302-320884... 29 2.3
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 29 3.1
06_03_1471 + 30374988-30375959 29 3.1
04_04_1536 - 34207425-34207490,34207801-34208268,34208345-342084... 29 3.1
04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539 29 3.1
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 29 4.1
06_03_1470 + 30371391-30372353 29 4.1
03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678... 29 4.1
12_01_0030 + 262452-263210,263332-263575,263867-264165 28 5.4
11_04_0242 - 15273774-15274043,15274131-15274235 28 5.4
08_01_0436 + 3842143-3842850,3843140-3843314,3843829-3843911 28 5.4
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 28 5.4
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 28 5.4
02_02_0341 + 9141556-9142654,9143357-9143454 28 5.4
01_07_0360 + 43056226-43057566 28 5.4
10_08_0753 + 20324011-20324113,20324210-20324231,20324344-203244... 28 7.1
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 7.1
04_04_1538 + 34239913-34241274,34241468-34241578 28 7.1
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630... 28 7.1
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 28 7.1
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 27 9.4
08_02_0773 + 21043553-21043813,21044775-21045203 27 9.4
06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507 27 9.4
02_04_0413 + 22681957-22682035,22682253-22682788 27 9.4
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 27 9.4
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/102 (25%), Positives = 50/102 (49%)
Frame = -1
Query: 504 IEQTLVQIHTGNVLEVLDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 325
++Q Q+ N L H Q+ Q+Q + ++ L + QH + +PL QQ
Sbjct: 659 LQQQQNQLQQQNQLHQ-QHQLQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQS 717
Query: 324 VPHLLEQQKVQRRVQL*EQQMELHRGYGRSEGRCCYQRTQCP 199
H L+QQ++Q ++Q +QQ ++ + + + + Q+ Q P
Sbjct: 718 QGHPLQQQQMQ-QMQQQQQQQQIQQMQQQQQMQQMQQQQQQP 758
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -1
Query: 522 LCSFSSIEQTLVQIHTGNVLEVLDHMG--SRQHMQQEQGECREPLAGLEQHQHSMAKQHR 349
L + ++I L H V EV +Q +QQ+Q + ++ +QHQ Q +
Sbjct: 626 LIAVAAISICLAVYHFSAVAEVPTQQPPMQQQQLQQQQNQLQQQNQLHQQHQ----LQPQ 681
Query: 348 MPLLGQQEVPHLLEQQKVQRRVQL*EQQMELHR 250
L Q ++ L+QQ++Q+ +QL Q + L +
Sbjct: 682 NQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQ 714
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 34.7 bits (76), Expect = 0.062
Identities = 24/90 (26%), Positives = 43/90 (47%)
Frame = -1
Query: 510 SSIEQTLVQIHTGNVLEVLDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQ 331
S + + ++IH + HM +R+ QQ+Q + P +Q QH +Q + Q
Sbjct: 81 SDVAASYIEIHH----KQTQHMKAREQQQQQQQQ--PPQQRQQQPQHIQMQQMLLQRAAQ 134
Query: 330 QEVPHLLEQQKVQRRVQL*EQQMELHRGYG 241
Q+ +QQ+ Q++ Q +QQ + R G
Sbjct: 135 QQQQQQQQQQQQQQQQQQQQQQQQQQRRDG 164
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 450 HMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPL--LGQQEVPHLLEQQKVQRRVQL 277
+ G +Q +Q QG + +Q + + QH L L QQ++P QQ ++VQ
Sbjct: 905 NQGDQQSLQTMQGYASQMWQYYQQQMYYLQAQHNQQLQSLQQQQLPTEHLQQNFMQQVQQ 964
Query: 276 *EQQMEL 256
QQM L
Sbjct: 965 LNQQMVL 971
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = -1
Query: 438 RQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQME 259
+Q +QQ+ + ++ L+ + Q Q +M +Q + L QQ+ L +QQ+ Q+ V L +QQ +
Sbjct: 1070 QQLLQQQLLQQQQYLSQMPQQQQNMTQQQQ---LFQQQQQQLFQQQQ-QQMVVLQQQQQQ 1125
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -1
Query: 486 QIHTGNVLE----VLDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVP 319
QIH + L+ ++HM Q G+ + + Q QH+ + Q + P Q P
Sbjct: 481 QIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQNQMQQQHASSTQGQQPATSQ---P 537
Query: 318 HLLEQQKVQRRVQL*EQQME 259
LL QQ+ Q++ Q +QQ +
Sbjct: 538 LLLPQQQQQQQQQQQQQQQQ 557
>06_01_0675 +
4937309-4937354,4937606-4937718,4937810-4937905,
4938003-4938059,4938145-4938300,4938402-4938486,
4938727-4938817,4938896-4939060,4939150-4939345,
4939593-4939731,4940187-4941874,4942575-4942765,
4942850-4942994
Length = 1055
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 456 LDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQK-VQRRVQ 280
+DH QH QQ ++ Q + +QH+ LL QQ HL +QQ+ +QR+
Sbjct: 482 VDHPVMSQHQQQPHQLSQQQQVQPSQQSSVVLQQHQAQLL-QQNAIHLQQQQEHLQRQQS 540
Query: 279 L*EQQME 259
QQ++
Sbjct: 541 QPAQQLK 547
>01_01_0552 - 4065623-4065698,4066133-4066218
Length = 53
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 269 CSYSC--TLRCTFCCSNRCGTSCCPSSGILCC 358
C Y+C TL C FCC C CC LCC
Sbjct: 25 CLYACLFTLCCCFCCYETC--ECCLE--CLCC 52
>04_04_1591 + 34647817-34648416
Length = 199
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 263 ICCSYSCTLRCTFCCSNRCGTSCCPSSG 346
+ C +CT+ CS +C SC P+ G
Sbjct: 172 LMCGKTCTMSAHTKCSAKCSKSCIPTCG 199
>02_02_0453 + 10420585-10421661,10422015-10422146,10422232-10422456,
10422555-10422680,10422777-10422839,10423214-10423296,
10424078-10424309,10424421-10424489,10424532-10424731,
10424819-10424894,10425015-10425081,10425194-10425471,
10425600-10425787,10426235-10426391,10426496-10426741
Length = 1072
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 353 CCFAILCWCCSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCSIDEKEHKAFL 532
C +LC C G L + C CC + S+ + + V +++ ++ L
Sbjct: 821 CVPEVLCTCADQSYLGILLNCCLCCSLASILHAPLNESSARFYAASVVVALENLHQRSIL 880
Query: 533 QRLKTKD-LLVDKS 571
R + D L+VD+S
Sbjct: 881 YRGVSADILMVDRS 894
>01_06_0802 +
32087661-32087965,32088106-32088220,32088302-32088421,
32089678-32089788,32090084-32090122,32090965-32091069,
32091149-32091187,32091923-32092015
Length = 308
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 386 NPASGSLHSPCSCCICC--RLPIWSSTSSTFPV 478
NP LH+P S RLP+W ST S PV
Sbjct: 32 NPPHRFLHAPSSPAAASPSRLPLWRSTGSLLPV 64
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = -1
Query: 456 LDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL 277
LD RQ Q +Q + L +Q Q +Q ++ QQE PH Q +Q +VQ+
Sbjct: 454 LDEQHQRQDHQPKQNHPHDELQHQKQ-QPEQQQQDQVQQQQQQEQPH---DQHLQ-QVQM 508
Query: 276 *EQQMELH 253
+QQ LH
Sbjct: 509 HDQQQPLH 516
>06_03_1471 + 30374988-30375959
Length = 323
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 380 CSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCS 502
C + A G+L C C+CC W ++S + C S CS
Sbjct: 23 CGSQAGGAL---CPNCLCCSQYGWCGSTSAYCGSGCQSQCS 60
>04_04_1536 -
34207425-34207490,34207801-34208268,34208345-34208485,
34208582-34208820,34209950-34210436
Length = 466
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 230 PSLLP*PLCN-SICCSYSCTLRCTFCCSNRCGT-SCCPSSGILCC 358
P P +C+ + C T C F N C CCP G CC
Sbjct: 378 PPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCC 422
>04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539
Length = 585
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 438 RQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQME 259
RQ MQQ+Q R L LEQ Q A Q ++ L QQ+ + Q+ Q + +Q +
Sbjct: 477 RQRMQQQQALQRRQLF-LEQQQQQAALQQQLMLEQQQQQQMMAALQQQQLAILFHDQPQQ 535
>10_07_0061 + 12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 438 RQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQM 262
+Q MQ +Q + PL + Q +Q + QQ+ +QQ+ Q+++Q +QQM
Sbjct: 1117 QQQMQLQQQFQQNPLQQQQLQQLQQQQQQQQQQQIQQQQQQQQQQQQQQQQIQQQQQQM 1175
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 381 QHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQME 259
Q Q + +Q + L QQ++ L +QQ+ Q++ Q+ +QQ +
Sbjct: 1117 QQQMQLQQQFQQNPLQQQQLQQLQQQQQQQQQQQIQQQQQQ 1157
>06_03_1470 + 30371391-30372353
Length = 320
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 380 CSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCS 502
C + A G+L C C+CC W ++S + C S CS
Sbjct: 21 CGSQAGGAL---CPNCLCCSQYGWCGSTSDYCGAGCQSQCS 58
>03_02_0994 -
13067254-13067379,13067483-13067521,13067824-13067893,
13068025-13068116,13068237-13068319,13068590-13068633,
13068682-13068800,13068883-13068915,13069152-13069239,
13069364-13069413
Length = 247
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Frame = +2
Query: 248 PLCNSI--C--CSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 415
P CN + C C T+ C C + + C + G+ C C C
Sbjct: 30 PCCNDVFHCRHCHNESTVICLVCDTEQPVAQVCYNCGV-CMGEYFCSACKFFDDDVR--- 85
Query: 416 CSCCICCRLPIW-SSTSSTFPVWICTSVC 499
C CC+ C IW + +ST + C
Sbjct: 86 CRCCLLCFCWIWLTGNTSTAKIAASAGSC 114
>12_01_0030 + 262452-263210,263332-263575,263867-264165
Length = 433
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 329 CCPSSGILCCFAILCWCCSNPASGSLHSPCS 421
C P CF LC C P + LH PC+
Sbjct: 324 CSPVQNYNACFGRLCSFCDEPRT-ILHPPCA 353
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 368 LCWCCSNPASGSLHSPCSCCICCRLP 445
+C CC P + +PC I C +P
Sbjct: 78 VCTCCGGPHGVCIPAPCCYAINCNIP 103
>08_01_0436 + 3842143-3842850,3843140-3843314,3843829-3843911
Length = 321
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 416 CSCCICCRLP 445
C CC CCRLP
Sbjct: 128 CGCCCCCRLP 137
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = -1
Query: 462 EVLDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRV 283
EV + G Q Q+EQGE E +G E+ Q + + ++E + +++ +
Sbjct: 33 EVEEEEGEEQ--QEEQGEEEEGFSGDEEEQEVEGEADGEQVEEEEEEESSVGEEEAEAEG 90
Query: 282 QL*EQQMELHRGYGRSE 232
+ E+++E +G G E
Sbjct: 91 EEEEEEVEEEQGAGEEE 107
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +2
Query: 230 PSLLP*P-LC-NSICCSYSCTLRCTFCCSNRC-GTSCCPSSGILCC 358
PS P P +C N C S T C + C CCP G CC
Sbjct: 370 PSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCC 415
>02_02_0341 + 9141556-9142654,9143357-9143454
Length = 398
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -2
Query: 446 WVAGSICSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSV 288
WV G C + + R +D + +++ S C +K T W CS+
Sbjct: 33 WVGGDHCHMFSKLLSIRCEDCPNLTVLLLPSFECSISDTKDINTIWFPNLCSL 85
>01_07_0360 + 43056226-43057566
Length = 446
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 254 CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCIC 433
CN IC +C++ CG C + C AI C NP + LH P C
Sbjct: 317 CN-ICFEQACSMEV-----KECGHQMCAA----CTLAICCHSKPNPKTLLLHPP--ACPF 364
Query: 434 CRLPI 448
CR I
Sbjct: 365 CRTTI 369
>10_08_0753 +
20324011-20324113,20324210-20324231,20324344-20324400,
20324704-20324785,20324903-20324998,20325265-20325389,
20325484-20325502,20325598-20325744
Length = 216
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 4/23 (17%)
Frame = +2
Query: 305 CSNRCGTSCCP----SSGILCCF 361
CS RCG S CP ++ + CCF
Sbjct: 71 CSGRCGESNCPEVCLATEVFCCF 93
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +2
Query: 266 CCSYSCTLRCTFCC---SNRCGTSCCPSSGILC-CFAIL-CW-CCSNPASGS 403
CCS C CC N+ C +C FA L C+ CC+ SGS
Sbjct: 665 CCSRLADCLCCMCCIKACNKMNDQCAIVMTQVCAAFACLGCYECCAELCSGS 716
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Frame = +2
Query: 266 CCSYS-CTLRCTFCCS----NRCGT-SCCPSSGILCC 358
C YS C T CC+ N C CCP G CC
Sbjct: 395 CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCC 431
>03_06_0341 -
33261210-33261327,33261411-33262057,33262950-33263061,
33263313-33264097,33264797-33264867,33266323-33266635
Length = 681
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = -1
Query: 435 QHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQMEL 256
QH QQ+Q + + +Q + +QH+ QQ+ P L+QQ Q+ Q +L
Sbjct: 537 QHQQQQQQQQFQQQHQQQQQSQQLQQQHQ-----QQQQPQQLQQQHQQQLAMSGGQNAQL 591
Query: 255 HRGYGRSEGR 226
+ S G+
Sbjct: 592 AQQLAMSGGQ 601
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 438 RQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQME 259
+Q QQ+Q + ++ +Q Q +QH+ QQ +QQ+ Q+ Q +QQ+
Sbjct: 523 QQVQQQQQQQQQQFQHQQQQQQQQFQQQHQQQQQSQQLQQQHQQQQQPQQLQQQHQQQLA 582
Query: 258 LHRG 247
+ G
Sbjct: 583 MSGG 586
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 384 EQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQMELHR 250
+Q H QH+ + Q + +QQ+ Q++ Q +QQ +LHR
Sbjct: 92 QQQYHHQQHQHQQIQMQQMLLQRAAQQQQQQQQQQQ-QQQQQLHR 135
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = -1
Query: 426 QQEQGECREPLAGLEQHQHSMAKQH-RMPLLGQ-----QEVPHLLEQQKVQRRVQL*EQQ 265
QQ+Q + ++ L L+QHQ +A Q + P Q Q V + + Q+ Q+++Q+ +Q+
Sbjct: 668 QQQQQQQQQKLLLLQQHQQKLAMQQLQSPPQAQTHPAMQPVQQIPQAQQGQQQMQMKQQE 727
Query: 264 M 262
+
Sbjct: 728 L 728
>08_02_0773 + 21043553-21043813,21044775-21045203
Length = 229
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 246 YGRSEGRCCYQRTQCPAGDINLCSVWRN 163
Y ++ CCY R+ PA D + +W N
Sbjct: 40 YCDTKQSCCYPRSGKPAADFGIHGLWPN 67
>06_03_1495 + 30566992-30567084,30567181-30567235,30567320-30567507
Length = 111
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -2
Query: 440 AGSICSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKW 261
A + S S + + Q + S++ I C+ S RC W + C+ C+ ++
Sbjct: 20 AAAASSSSHPQLVQQMQVKRARSLLQAPKIDCQGTCSGRCANNWKKEMCNKMCNVCCNRC 79
Query: 260 SC 255
+C
Sbjct: 80 NC 81
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 230 PSLLP*PLCNSICCSYSCTLRCTFCCSNRCGTSCCPSS 343
P P P + CC + C C CG CP S
Sbjct: 95 PPPSPSPCVHPPCCESAAGCCCNGCSGGGCGGGQCPPS 132
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 302 CCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCS--CCIC 433
CC + G C SG C C +P+ + H PC CC C
Sbjct: 107 CCESAAGCCCNGCSGGGCGGG---QCPPSPSCENHHPPCKPGCCCC 149
>01_07_0016 - 40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 438 RQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQEVPHLLEQQKVQRRVQL*EQQME 259
R + EQ + R+ L EQHQ + ++ LL QQ+ +QQ++ Q+ +QQ++
Sbjct: 863 RVQFELEQQQRRQQLQQ-EQHQRQLQQRQAQQLLQQQQQQQQQQQQQLILE-QMLQQQLQ 920
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,581,335
Number of Sequences: 37544
Number of extensions: 281712
Number of successful extensions: 1235
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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