Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0026
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 193 1e-49
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 193 1e-49
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 193 1e-49
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 193 1e-49
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 193 1e-49
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 193 1e-49
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 193 1e-49
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 193 1e-49
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 188 2e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 134 7e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 134 7e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 132 2e-31
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 132 2e-31
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 132 2e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 111 5e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 2e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 81 6e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.010
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.010
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.51
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 29 3.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.8
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 28 6.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.3
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 27 8.4
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 27 8.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 173
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 173
Score = 131 bits (316), Expect = 5e-31
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 77
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 78 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 129
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 202 MVGMGQKDSYVGDEAQSK 255
MVGMGQKDSYVGDEAQSK
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 107
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 108 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 159
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1
Query: 124 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 193 bits (470), Expect = 1e-49
Identities = 92/112 (82%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 188 bits (459), Expect = 2e-48
Identities = 91/113 (80%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASG-VPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFNTPAMYV IQAVLSLYASG + T V+ T P +GYALP
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT-VPIYEGYALP 172
Score = 127 bits (307), Expect = 6e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 76 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKI 326
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 134 bits (323), Expect = 7e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKI 326
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKI 326
+RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDM 317
+RGILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 132 bits (319), Expect = 2e-31
Identities = 60/118 (50%), Positives = 84/118 (71%), Gaps = 1/118 (0%)
Frame = +3
Query: 255 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 431
RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALPPRHSLR 605
+I FETFN PA+Y+ +QAVLSLYA+G S + P KG+A+ +H+++
Sbjct: 125 EIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAM--KHAIQ 180
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 252
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 111 bits (266), Expect = 5e-25
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Frame = +3
Query: 246 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 422
++ R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 423 KMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYAL 584
KM Q+MFE + ++YVA+QAVL+LYA G+ S + CP +G+AL
Sbjct: 122 KMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFAL 175
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 243
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (244), Expect = 2e-22
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +3
Query: 267 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 446
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 447 TFNTPAMYVAIQAVLSLYAS 506
+FN P +Y+A+QAVL+L AS
Sbjct: 140 SFNVPGLYIAVQAVLALTAS 159
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 506 RRTTGIVLDFGDGVFHTVPI 565
R TG+V+D GDGV H +P+
Sbjct: 168 RSLTGLVIDSGDGVTHCIPV 187
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.0 bits (191), Expect = 6e-16
Identities = 39/101 (38%), Positives = 58/101 (57%)
Frame = +3
Query: 282 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 461
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 462 AMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYAL 584
A Y++ VLS +A G S ++ P GYA+
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAV 194
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 452
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 452
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -3
Query: 331 CQIFSMSSQLVTIPC-SMGYLRVRIPLCSVPHLLHKSPSVP-YRPSRPD 191
CQ+FS QLVT+ SMG +++++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 300 TNWD-DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA--NREKMTQIMFETFNTPAMY 470
T WD D +++ F ++L APE+ ++L NP ++ +++ E ++
Sbjct: 152 TFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLF 211
Query: 471 VAIQAVLSLYASGVPPVSCW 530
+ASG P W
Sbjct: 212 TFFDIAYQGFASGDPAADAW 231
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 469 TSPSKPCSRCTRPAY 513
TSPSK CS C RPA+
Sbjct: 6 TSPSKQCSICQRPAF 20
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 353 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 478
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 353 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 478
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 353 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 478
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 353 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 478
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 149 ASSPAKPALHIPEPLSTTNAATSS 78
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +3
Query: 267 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 446
T+ P++ I+ N D ++WH L + ++ T + + + E + +
Sbjct: 12 TVAPPVDFPIIGNCDFQAQLWH---LMSLHLQMQKSSAASTSSSSSSSTSSENLKKSPSS 68
Query: 447 TFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCP--FTKGYALPPRHSL 602
NT +I +L+ + VP + VSS+P P T GY L +L
Sbjct: 69 VQNTSVF--SIDNILN--SQKVPKLELENDEDVSSSPSPTCSTTGYTLDSLQNL 118
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +3
Query: 267 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 446
T+ P++ I+ N D ++WH L + ++ T + + + E + +
Sbjct: 12 TVAPPVDFPIIGNCDFQAQLWH---LMSLHLQMQKSSAASTSSSSSSSTSSENLKKSPSS 68
Query: 447 TFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCP--FTKGYALPPRHSL 602
NT +I +L+ + VP + VSS+P P T GY L +L
Sbjct: 69 VQNTSVF--SIDNILN--SQKVPKLELENDEDVSSSPSPTCSTTGYTLDSLQNL 118
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 124 KAGFAGDDAPRAVFPSIVGRPRHQG 198
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 174 RGKAPPSGRDGRYGTEG 224
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 508 PDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 413
P S TAW+ GV N+ N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 510 VPPVSCWTSATVSSTPCPFTKGYALPP 590
+PP + T+ T + PCP+ PP
Sbjct: 136 IPPTTTTTTTTTTRPPCPYPPATNTPP 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,997,136
Number of Sequences: 27780
Number of extensions: 411953
Number of successful extensions: 1627
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -