Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0025
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036687-1|AAM75374.1| 173|Caenorhabditis elegans Hypothetical ... 31 0.61
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 30 1.4
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 30 1.4
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 29 2.4
Z49067-3|CAA88852.3| 591|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z34799-8|CAA84319.3| 591|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024844-4|AAK29958.1| 421|Caenorhabditis elegans Hypothetical ... 28 5.7
AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily a... 27 7.5
Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35604-7|CAA84682.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF036687-1|AAM75374.1| 173|Caenorhabditis elegans Hypothetical
protein C08G9.1 protein.
Length = 173
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 582 VADVESFEFAFSHQILLKCLLPQQNNNFLCIGRHCTVG 469
VA V SF FA HQ+ C ++N LC G C +G
Sbjct: 11 VALVISFTFAGGHQVKCFCDRDSCDDNLLCQGDFCFIG 48
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 299 YSLCCICTF*IRHYSSAVGLLVVLQIQSSSAIF 201
Y +CCICTF Y++ + V I S S I+
Sbjct: 184 YGICCICTFIAIFYNAIIAQAVYFAIVSLSKIW 216
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 299 YSLCCICTF*IRHYSSAVGLLVVLQIQSSSAIF 201
Y +CCICTF Y++ + V I S S I+
Sbjct: 184 YGICCICTFIAIFYNAIIAQAVYFAIVSLSKIW 216
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +3
Query: 243 SDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKC 422
SD P+S TN+ + P S S S+ + TA P+ T+T C
Sbjct: 43 SDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSASSETPC 102
Query: 423 LSELET 440
SE +T
Sbjct: 103 NSETQT 108
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 243 SDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKC 422
SD P+S TN+ + P S S S+ + TA P+ T T C
Sbjct: 651 SDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVSSDSTTAGPSSTATNSASSETPC 710
Query: 423 LSELET 440
SE +T
Sbjct: 711 NSETQT 716
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 243 SDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKC 422
SD P+S TN+ + P S S S+ + TA P+ T T C
Sbjct: 689 SDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVSSDSTTAGPSSTATNSASSETPC 748
Query: 423 LSELET 440
SE +T
Sbjct: 749 NSETQT 754
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +3
Query: 240 KSDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKK 419
K D P+S TN+ + P S S S+ + TA P+ T+T
Sbjct: 1098 KYDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSASSETP 1157
Query: 420 CLSELET 440
C SE +T
Sbjct: 1158 CNSETQT 1164
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T+T + C SE +T
Sbjct: 88 PSSTVTNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSESSETPCNSETQT 146
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T+T C SE +T
Sbjct: 392 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQT 450
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T+T C SE +T
Sbjct: 582 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQT 640
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T+T C SE +T
Sbjct: 1000 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSASSETPCNSETQT 1058
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +3
Query: 243 SDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKC 422
SD P+S TN+ + P S S S+ + TA P+ T+T C
Sbjct: 1213 SDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTVTNSASSETPC 1272
Query: 423 LSELET 440
SE +T
Sbjct: 1273 NSETQT 1278
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 243 SDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKC 422
SD P+S TN+ + P S S S+ + TA P+ T T C
Sbjct: 537 SDSTTPGPSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPC 596
Query: 423 LSELET 440
SE +T
Sbjct: 597 NSETQT 602
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T+T C SE +T
Sbjct: 1258 PSSTVTNSASSETPCNSETQTSDGTSTMTVSSDSTTAGPSSTVTNSASSETPCNSETQT 1316
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 164 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 222
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 202 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 260
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 240 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 298
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 278 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 336
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 316 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 374
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 354 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 412
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 848 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 906
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 886 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 944
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 924 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 982
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 264 PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELET 440
P+S TN+ + P S S S+ + TA P+ T T C SE +T
Sbjct: 962 PSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSSTATNSASSETPCNSETQT 1020
>Z49067-3|CAA88852.3| 591|Caenorhabditis elegans Hypothetical
protein C44F1.1 protein.
Length = 591
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -1
Query: 300 IQLVLHLYLLNSALFFCSRTFGSTPDPIVFCNFSSRPLLQS*KVSRLFNCCAH 142
IQL +HL + N + S + P I N + PLLQS +RL NC H
Sbjct: 125 IQLEVHLNIDNKIIVVHSLI--THPFLIAITNDQTEPLLQSIFWNRLLNCDQH 175
>Z34799-8|CAA84319.3| 591|Caenorhabditis elegans Hypothetical
protein C44F1.1 protein.
Length = 591
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -1
Query: 300 IQLVLHLYLLNSALFFCSRTFGSTPDPIVFCNFSSRPLLQS*KVSRLFNCCAH 142
IQL +HL + N + S + P I N + PLLQS +RL NC H
Sbjct: 125 IQLEVHLNIDNKIIVVHSLI--THPFLIAITNDQTEPLLQSIFWNRLLNCDQH 175
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 234 YQKSDCRRIM--PNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTL 392
+ +CRR+ P S G T F R++PS + S+ +A G S VTL
Sbjct: 328 FDTHECRRLYFSPESHGLFVTGIEFVSRTSPSICEDIQSETPGIASGFQSAVVTL 382
>AC024844-4|AAK29958.1| 421|Caenorhabditis elegans Hypothetical
protein Y65B4A.2 protein.
Length = 421
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 171 PFNFEEADEKKNCRRRLDLEYYQK 242
P F EA+EK+ C +R YYQ+
Sbjct: 246 PATFFEAEEKRTCMKRCQNIYYQQ 269
>AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily
assigned gene nameprotein 203 protein.
Length = 1220
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 198 KKNCRRRLDLEYYQKSDCRRIMP 266
+K C RL E + K+ CRRI+P
Sbjct: 96 EKTCFERLHQETFGKTGCRRIVP 118
>Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical
protein F13B12.3 protein.
Length = 717
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +1
Query: 163 SGNLLTLKKRTRRKIAEDDWIW------STTKSPTAEE*CRIQKVQMQHKLYFRFVLLQA 324
SG T+K RTR EDD W ++ + E ++ +++ + KL+ + +++
Sbjct: 7 SGRRKTIKFRTRNFSIEDDKYWIQPSRCTSVDMSSREIINKLNEMEQEEKLFITYDVIER 66
Query: 325 RPRWS 339
P+++
Sbjct: 67 NPKFA 71
>Z35604-7|CAA84682.1| 304|Caenorhabditis elegans Hypothetical
protein ZK1058.9 protein.
Length = 304
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 350 RLAGDHRGRAWSRTNRKYSL 291
RL D RG++W + RKY+L
Sbjct: 39 RLLDDSRGQSWEKLARKYTL 58
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
protein F10F2.2 protein.
Length = 1343
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 477 TVGYSVGNLALPKFPI 430
TVGYS GNL LP P+
Sbjct: 339 TVGYSFGNLNLPGLPL 354
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical
protein B0464.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 160 QSGNLLTLKKRTRRKIAEDDWIWSTTKSPTAEE*CRIQKV 279
Q+G LLT ++ R + WI +T P AE ++ K+
Sbjct: 382 QTGELLTEDQQKRAEFMTRAWIRNTILEPLAEHIDKVNKI 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,269,991
Number of Sequences: 27780
Number of extensions: 289109
Number of successful extensions: 867
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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