Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0018
(502 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 247 2e-67
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 247 2e-67
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 247 2e-67
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 236 3e-64
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 3.3
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 4.4
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 4.4
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 5.8
AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CY... 23 5.8
AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450 CY... 23 5.8
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 7.7
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 23 7.7
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 247 bits (604), Expect = 2e-67
Identities = 112/115 (97%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 247 bits (604), Expect = 2e-67
Identities = 112/115 (97%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 247 bits (604), Expect = 2e-67
Identities = 112/115 (97%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 236 bits (578), Expect = 3e-64
Identities = 104/115 (90%), Positives = 110/115 (95%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGD +
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKS 115
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 3.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 190 GKAPPSGRDGRYGTEGL 240
G+ P GRDG +G GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 4.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 77 FKMCDEEVAALVVDNGSGMC 136
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 4.4
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 188 RSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 87
+ R TL E +P +R H LLP + R
Sbjct: 841 KRRPTLTESTSFELKKPKDFRKHSLLPLNNVFDR 874
Score = 23.0 bits (47), Expect = 5.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 404 Q*AGRGVPRGRHA 366
Q AG G PRGRH+
Sbjct: 1374 QPAGGGTPRGRHS 1386
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.0 bits (47), Expect = 5.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 402 LRLPSTPRPYRGEDDPRFMVRKQFNT 479
LRL + PR G DP F + FNT
Sbjct: 1000 LRL-AQPRSSAGRSDPMFRMSAVFNT 1024
>AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450
CYP4C28 protein.
Length = 150
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 265 QKRYPDPQIPHRTRNRH 315
+K YPD +P + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133
>AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450
CYP4G17 protein.
Length = 151
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 277 PDPQIPHRTRNRH 315
PD +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 22.6 bits (46), Expect = 7.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 388 PRPAY*GSPQPQGPTEEKMTPDSWFENNSTRP 483
PRP + P +++ ++P + EN S RP
Sbjct: 441 PRPGQSPTQSPSPGSQQSLSPANTDENFSYRP 472
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 22.6 bits (46), Expect = 7.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 368 AAHCRRYDAKSSPCHPS 318
+AH RR+D SSP P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,348
Number of Sequences: 2352
Number of extensions: 13654
Number of successful extensions: 39
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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