Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0012
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856... 99 1e-21
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 99 1e-21
03_04_0206 - 18493178-18495310 70 2e-12
02_05_1297 - 35536193-35536312,35536405-35536467,35536610-355369... 63 2e-10
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 52 5e-07
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 39 0.003
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 38 0.006
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 37 0.010
08_02_1616 + 28260204-28262555 37 0.010
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 34 0.073
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 33 0.22
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 33 0.22
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 32 0.30
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 32 0.30
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 32 0.30
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 32 0.30
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 32 0.39
01_06_0857 - 32507119-32507328,32507936-32508058,32508194-325082... 31 0.52
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 31 0.68
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229... 31 0.90
04_04_0118 - 22889608-22890816,22891990-22892261,22892306-228931... 30 1.6
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 1.6
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 29 2.1
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 29 2.1
01_07_0264 - 42388455-42388565,42388656-42388688,42388792-423889... 29 2.1
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 29 2.7
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 29 2.7
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 29 3.6
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 29 3.6
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 29 3.6
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 29 3.6
02_05_0621 - 30417044-30417196,30417511-30417586,30418055-304181... 28 4.8
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 28 4.8
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 28 4.8
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 28 6.3
11_01_0230 - 1788199-1789746 28 6.3
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 28 6.3
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 28 6.3
04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410 28 6.3
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052... 28 6.3
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 28 6.3
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 28 6.3
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 27 8.4
>09_06_0365 -
22582467-22583524,22584407-22584641,22585474-22585684,
22585775-22585848,22585943-22586092
Length = 575
Score = 99 bits (238), Expect = 1e-21
Identities = 46/68 (67%), Positives = 55/68 (80%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPE 430
P SRDI I + S+TF+G +LL DT LELN GRRYGL+GLNGCGKS LL A+ RE+PIP
Sbjct: 44 PLSRDIHIESLSLTFHGHDLLLDTDLELNYGRRYGLLGLNGCGKSCLLKAIGCRELPIPP 103
Query: 431 HIDIFHLT 454
H+DI+HLT
Sbjct: 104 HMDIYHLT 111
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 99 bits (238), Expect = 1e-21
Identities = 44/68 (64%), Positives = 57/68 (83%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPE 430
P SRDI I + S+TF+G +L+ D+ LELN GRRYGL+GLNGCGKS+LL A+ RE+PIPE
Sbjct: 61 PLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPE 120
Query: 431 HIDIFHLT 454
H+DI+HL+
Sbjct: 121 HMDIYHLS 128
>03_04_0206 - 18493178-18495310
Length = 710
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +2
Query: 260 RDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHID 439
+DI + NFS++ G ELL++ L ++ GRRYGLVG NG GKS+LL L R+VP+P ID
Sbjct: 156 KDIVLENFSVSARGKELLKNASLRISHGRRYGLVGPNGMGKSTLLKLLSWRQVPVPRSID 215
Query: 440 I 442
+
Sbjct: 216 V 216
>02_05_1297 -
35536193-35536312,35536405-35536467,35536610-35536942,
35537098-35537184,35538337-35538399,35538604-35538750,
35538900-35539001,35539069-35539197,35539506-35539664,
35539726-35539967,35540317-35540506,35540692-35540907,
35541536-35541760
Length = 691
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVP-IP 427
P RDI + NFS+T G +L+QD + L GR YGLVG NG GK+S L A+ + IP
Sbjct: 177 PAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIP 236
Query: 428 EHIDIFHL 451
++ I H+
Sbjct: 237 KNCQILHV 244
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +2
Query: 260 RDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHID 439
RD+ + + + G L + L + GRRYGLVG NG GK++LL L R++P+P I
Sbjct: 87 RDVVVEDSDVWVQGVALFEGASLRVAHGRRYGLVGPNGKGKTTLLKLLHWRKLPVPRGIR 146
Query: 440 IFHLTRGGARYPIRPIV 490
+ + + RP++
Sbjct: 147 VTLVVQEDDNRDPRPVI 163
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 329 ELNCGRRYGLVGLNGCGKSSLLAALRRREVP 421
+++ G+R +VG NG GKS+LL L P
Sbjct: 397 DVSMGQRVAVVGPNGAGKSTLLKLLAGELTP 427
>04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSE--LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
P DI + + + + + +L+ + +N G + G+VG G GKS+L+ AL R P+
Sbjct: 1232 PRRGDIDVKDLKVRYRSNTPLILKGITISINSGEKIGVVGRTGSGKSTLVQALFRLVEPV 1291
Query: 425 PEHI 436
HI
Sbjct: 1292 EGHI 1295
>01_06_0555 - 30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
+LQD L++ G GLVG +GCGKS+++ ++R
Sbjct: 982 ILQDFSLDVKAGTSIGLVGRSGCGKSTIIGLIQR 1015
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
+L+D L++ G+ LVG +G GKS+ +A ++R
Sbjct: 381 VLKDFNLQIPAGQTVALVGSSGSGKSTAIALVQR 414
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 239 TGCAPCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREV 418
+G + +++ + ++ G +L+D E+ G + GLVG+NG GK++ L + E
Sbjct: 82 SGASSIPTGVRLEGIAKSYKGVTVLRDVSWEVQRGEKVGLVGVNGAGKTTQLRIIAGLED 141
Query: 419 P 421
P
Sbjct: 142 P 142
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 266 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLL 394
+ I N F +L + L + G + ++G NGCGKS+LL
Sbjct: 434 LTIRNLEFGFGEEKLFNNANLIVERGEKIAIIGPNGCGKSTLL 476
>08_02_1616 + 28260204-28262555
Length = 783
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ +D L GR LVG +GCGKSS+LA ++R
Sbjct: 539 QVFRDLSLRARAGRTLALVGASGCGKSSVLALVQR 573
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 34.3 bits (75), Expect = 0.073
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 299 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIP 427
G E+L+ L++ G G++G +G GKS+LL AL R P P
Sbjct: 439 GEEILRGVDLDVPRGVVVGVIGPSGSGKSTLLRALNRLWEPAP 481
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
+LQ L + G+ LVG +GCGKS++++ L+R
Sbjct: 396 ILQGFSLSIPAGKVVALVGSSGCGKSTVISLLQR 429
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
+L L + G+R LVG +G GKSS+LA L R
Sbjct: 1011 ILDGFSLVIEPGQRVALVGPSGAGKSSVLALLLR 1044
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHI 436
E+ +D L ++ G+ LVG +G GKS+ ++ L+R P HI
Sbjct: 1057 EIFRDLCLTIHSGKTVALVGESGSGKSTAISLLQRFYDPDVGHI 1100
>08_01_0345 +
3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHI 436
+L+ L + G+ LVG +GCGKS++++ ++R PI +I
Sbjct: 374 ILRSFSLSIPAGKVVALVGSSGCGKSTVISLVQRFYDPISGNI 416
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
+L L + G+R LVG +G GKS++++ L R
Sbjct: 1006 ILDGFSLAIEPGQRVALVGPSGAGKSTIVSLLLR 1039
>06_01_0591 +
4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 302 SELLQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 403
S +L+D LEL G ++G GCGKSSLL ++
Sbjct: 630 SMILRDVSLELQKGIFVAIIGEVGCGKSSLLNSI 663
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 311 LQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
L D ++ G + G++G G GKSS+L AL R
Sbjct: 1139 LNDVSFFISSGMQVGIIGRTGAGKSSILNALLR 1171
>05_07_0003 + 26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ ++ L + G+ LVG +GCGKS+++A L R
Sbjct: 1067 QIFRNLSLRIPSGKMVALVGESGCGKSTVIALLER 1101
>04_04_1331 - 32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ +D L++ GR LVG +G GKS+++A + R
Sbjct: 1036 QIFKDFNLKIQAGRSQALVGASGSGKSTVIALIER 1070
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHI 436
++ +D L + G+ LVG +G GKS+ ++ L+R P HI
Sbjct: 1046 QIFEDLCLTIQSGKTVALVGESGSGKSTAISLLQRFYDPDAGHI 1089
>01_06_0857 -
32507119-32507328,32507936-32508058,32508194-32508262,
32509963-32510238
Length = 225
Score = 31.5 bits (68), Expect = 0.52
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHIDIFHLTRGGARYPIRPI 487
+L+D L + G+ + L+G NGCGKS+LL + +P E F L + RPI
Sbjct: 63 VLKDCSLRVPPGQLWMLLGPNGCGKSTLLKVV----MPTVESDVAFGLGKLNLSLDERPI 118
Query: 488 VSRITIHGRRFTNVVTGKTLAFPNLIALQD 577
T+ G + V LA + + L D
Sbjct: 119 Q---TLSGGQKQRVAIAGALAEASKVLLLD 145
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 260 RDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEH 433
++ ++A+ S G+E +LEL GLVG+ GKS+LL+AL R I ++
Sbjct: 314 KEEEMASLSTGHPGTETY--LILELKSIADVGLVGMPNAGKSTLLSALSRARPEIADY 369
>07_03_0293 +
16321539-16321893,16322020-16322207,16322881-16322904,
16323497-16323550,16323854-16323944,16324715-16324815,
16324949-16324999,16326626-16326754,16327772-16327834,
16327928-16328171,16329628-16329776,16329855-16329944,
16330343-16330477,16330579-16330635,16331079-16331135,
16332299-16332336,16332532-16332601,16332971-16333207
Length = 710
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHIDI 442
E+L L + CG+ LVG +G GKS+++ L R P I +
Sbjct: 446 EILNGLDLTIECGKITALVGPSGAGKSTVVQLLARYYEPTHGRITV 491
>04_04_0118 - 22889608-22890816,22891990-22892261,22892306-22893131,
22893311-22893534,22893620-22893936,22894035-22894294,
22894723-22894923,22895015-22895190,22895445-22895718
Length = 1252
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
+ +D L + G+ LVG +G GKS+++A + R P+
Sbjct: 1027 VFKDFSLRIRAGQSQALVGASGSGKSTVIALIERFYDPL 1065
>02_02_0492 - 10907529-10907629,10907714-10907953,10908035-10908098,
10908416-10908721,10909347-10909561,10909656-10909950,
10910493-10910597,10911112-10911180,10911433-10911519,
10911953-10913704,10914964-10915054,10915217-10915488
Length = 1198
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSEL---LQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
P + +I++ N + Y ++L L+ L G R G+VG G GKS+L+ AL R
Sbjct: 951 PTNGEIELRNLHVR-YATQLPFVLKGLTCTLPRGLRTGIVGRTGNGKSTLIQALFR 1005
>05_07_0004 + 26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ D L + G+ LVG +G GKS+ +A L R
Sbjct: 986 QIFSDFTLSIPSGKTVALVGQSGSGKSTAIALLER 1020
>02_02_0490 - 10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSEL---LQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
P + +I++ N + Y ++L L+ L G + G+VG G GKS+L+ AL R
Sbjct: 939 PTNGEIELRNLHVR-YATQLPFVLKGLTCTLPGGLKTGIVGRTGSGKSTLIQALFR 993
>01_07_0264 -
42388455-42388565,42388656-42388688,42388792-42388905,
42389011-42389100,42389173-42389268,42389363-42389404,
42389498-42389608,42392258-42392440,42392518-42392961
Length = 407
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 210 NSEARSCTGSLAVHPVLEISR*LTFQLLSMGV 305
N A +CT AVH VLE S T + MGV
Sbjct: 40 NENAHACTSLTAVHQVLEESTNNTVHAMDMGV 71
>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ D L + G+ LVG +G GKS+ +A L R
Sbjct: 1047 QIFSDFTLHIPSGKTVALVGESGSGKSTAIALLER 1081
>01_06_0365 + 28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++L D L + G+ LVG +G GKS+++A L R
Sbjct: 927 QVLCDFTLGIPSGKTVALVGESGSGKSTVIALLER 961
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 332 LNCGRRYGLVGLNGCGKSSLLAALRR 409
+N + G+VG G GKSS+L AL R
Sbjct: 1291 INGSEKVGIVGRTGAGKSSMLNALFR 1316
>04_04_0961 +
29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 302 SELLQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 403
S L+D L++ G + + G+ G GKSSLL+++
Sbjct: 410 SPTLKDVELKVKRGMKVAICGMVGSGKSSLLSSI 443
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNC---GRR-YGLVGLNGCGKSSLLAALRRREV 418
P +I I + + +E L L ++C GR+ G+VG G GKS+L+ AL R
Sbjct: 939 PLDGNINIRCLEVRY--AEHLPSVLRNISCTIPGRKKVGIVGRTGSGKSTLIQALFRIVE 996
Query: 419 PIPEHIDI 442
P I+I
Sbjct: 997 PREGTIEI 1004
>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 341 GRRYGLVGLNGCGKSSLLAALRR 409
G++ G+VG G GKS+L+ AL R
Sbjct: 1289 GKKIGIVGRTGSGKSTLIQALFR 1311
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 353 GLVGLNGCGKSSLLAALRRREVPIP 427
GL+G +G G++ LRRR VP+P
Sbjct: 17 GLLGDSGGGEAPAAEVLRRRRVPVP 41
>02_05_0621 -
30417044-30417196,30417511-30417586,30418055-30418157,
30418269-30418339,30418446-30418789,30419867-30420004,
30420089-30420151,30420392-30420489,30421049-30421179,
30422397-30422428
Length = 402
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +2
Query: 341 GRRYGLVGLNGCGKSSLLAALRRREVPIPEHIDIFHLTRGGARYPIRPIVSRITIHGRRF 520
G+ YGL+G G GK LLA R + + R +R + ++ + G
Sbjct: 297 GKGYGLLGQAGSGKLRLLAGQSRLAAKVAKRFKARSCDRSESRSGLTSTLAFTPVQGMEL 356
Query: 521 TN 526
+N
Sbjct: 357 SN 358
>02_05_0385 - 28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 326 LELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
L + G+ LVG++G GKS++L+ + R PI
Sbjct: 1066 LLMKAGKSMALVGMSGSGKSTVLSLILRFYDPI 1098
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 329 ELNCGRRYGLVGLNGCGKSSLLAALRRREV 418
EL G+VGL GKSSL+ +L+R V
Sbjct: 264 ELKLAITVGIVGLPNVGKSSLINSLKRSRV 293
>12_01_0227 -
1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 492 LTIGRIGYRAPPRVRWNMSMCSGIGTSRRLKAASND 385
L IGR + P V W + IGT RRLK A D
Sbjct: 227 LVIGR--FMDPIEVSWKIKKWLNIGTERRLKKAIAD 260
>11_01_0230 - 1788199-1789746
Length = 515
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 492 LTIGRIGYRAPPRVRWNMSMCSGIGTSRRLKAASND 385
L IGR + P V W + IGT RRLK A D
Sbjct: 227 LVIGR--FMDPIEVSWKIKKWLNIGTERRLKKAIAD 260
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 269 KIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRRE 415
++ + +T +LLQD G L+G+ G GK++LL L R+
Sbjct: 737 EMTKYGVTDKKLQLLQDVSGAFRPGVLTALMGITGAGKTTLLDVLAGRK 785
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 266 IKIANFSITFYGSEL---LQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 403
I + + S ++ GSE L++ L + G + + G G GKSSLL AL
Sbjct: 408 IHVQDGSFSWSGSEAELTLKNAHLSIRRGEKVAVCGPVGSGKSSLLCAL 456
>04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410
Length = 1279
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 326 LELNCGRRYGLVGLNGCGKSSLLAALRR 409
LE+ G+ LVG +G GKS+++ + R
Sbjct: 1051 LEIGAGKTVALVGPSGSGKSTVIGLIER 1078
>02_03_0235 -
16702768-16702956,16703956-16704492,16705084-16705233,
16705310-16705625,16707005-16707286,16707895-16707971,
16708121-16708186,16708700-16709246,16709435-16709565,
16709642-16709746,16709859-16710039,16710123-16710185,
16711000-16711109,16711576-16711638,16711859-16712191
Length = 1049
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 344 RRYGLVGLNGCGKSSLLAAL 403
RR L+GL G GK+SLL AL
Sbjct: 750 RRVRLLGLEGAGKTSLLKAL 769
>02_01_0672 -
4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 326 LELNCGRRYGLVGLNGCGKSSLLAALRR 409
L + GR LVG +G GKS+++A L R
Sbjct: 382 LRVPAGRTVALVGGSGSGKSTVIALLER 409
>02_01_0670 -
4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 326 LELNCGRRYGLVGLNGCGKSSLLAALRR 409
L + GR LVG +G GKS+++A L R
Sbjct: 372 LRVPAGRTVALVGGSGSGKSTVIALLER 399
>02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ + L + G+ LVG +G GKS+++A L R
Sbjct: 1012 QIFTNLCLRIPSGKTVALVGESGSGKSTVVALLER 1046
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,434
Number of Sequences: 37544
Number of extensions: 330138
Number of successful extensions: 858
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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