Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0012
(588 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60790.1 68418.m07627 ABC transporter family protein similar ... 101 3e-22
At3g54540.1 68416.m06035 ABC transporter family protein similar ... 66 1e-11
At1g64550.1 68414.m07317 ABC transporter family protein similar ... 53 1e-07
At5g09930.1 68418.m01148 ABC transporter family protein 44 8e-05
At5g64840.1 68418.m08157 ABC transporter family protein 43 1e-04
At3g13100.1 68416.m01640 ABC transporter family protein similar ... 37 0.011
At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu... 36 0.026
At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu... 36 0.026
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 35 0.035
At4g01820.1 68417.m00239 multidrug resistance P-glycoprotein, pu... 34 0.081
At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport... 34 0.081
At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport... 34 0.081
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 34 0.081
At3g13090.1 68416.m01639 ABC transporter, putative similar to MR... 32 0.25
At4g33460.1 68417.m04753 ABC transporter family protein ABC-type... 31 0.75
At3g59140.1 68416.m06593 ABC transporter family protein putative... 31 0.75
At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-g... 31 0.75
At5g02270.1 68418.m00150 ABC transporter family protein NBD-like... 30 1.00
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 30 1.00
At1g04120.1 68414.m00401 ABC transporter family protein Strong s... 30 1.00
At1g04110.1 68414.m00400 subtilase family protein contains simil... 30 1.00
At2g41700.1 68415.m05151 ABC transporter family protein similar ... 30 1.3
At5g46540.1 68418.m05730 ABC transporter family protein contains... 29 1.7
At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-b... 29 1.7
At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g... 29 1.7
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 29 1.7
At5g10930.1 68418.m01268 CBL-interacting protein kinase 5 (CIPK5... 29 2.3
At5g25110.1 68418.m02975 CBL-interacting protein kinase 25 (CIPK... 29 3.0
At3g28360.1 68416.m03544 ABC transporter family protein similar ... 29 3.0
At3g28345.1 68416.m03541 ABC transporter family protein similar ... 29 3.0
At5g44110.1 68418.m05397 ABC transporter family protein 28 4.0
At4g25450.1 68417.m03665 ABC transporter family protein similar ... 28 4.0
At4g18050.1 68417.m02686 ABC transporter family protein contains... 28 4.0
At1g03905.1 68414.m00375 ABC transporter family protein similar ... 28 4.0
At1g48550.1 68414.m05429 vacuolar protein sorting-associated pro... 28 5.3
At5g13610.1 68418.m01576 expressed protein 27 7.0
At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter... 27 7.0
At1g53390.1 68414.m06052 ABC transporter family protein similar ... 27 7.0
At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter... 27 7.0
At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein, pu... 27 9.3
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 27 9.3
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 27 9.3
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 27 9.3
At2g07680.1 68415.m00992 ABC transporter family protein 27 9.3
>At5g60790.1 68418.m07627 ABC transporter family protein similar to
ABC transporter homolog PnATH GI:7573600 from [Populus
nigra]
Length = 595
Score = 101 bits (243), Expect = 3e-22
Identities = 43/68 (63%), Positives = 59/68 (86%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPE 430
P SRDI+I + S+TF+G +L+ D++LELN GRRYGL+GLNGCGKS+LL A+ RRE+PIP+
Sbjct: 64 PQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPD 123
Query: 431 HIDIFHLT 454
+DI+HL+
Sbjct: 124 QMDIYHLS 131
>At3g54540.1 68416.m06035 ABC transporter family protein similar to
ABC50 GI:10863747 from [Rattus norvegicus]
Length = 723
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/61 (45%), Positives = 46/61 (75%)
Frame = +2
Query: 260 RDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHID 439
+DI I +FS++ G ELL++ + ++ G+RYGL+G NG GKS+LL L R++P+P++ID
Sbjct: 161 KDITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNID 220
Query: 440 I 442
+
Sbjct: 221 V 221
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 332 LNCGRRYGLVGLNGCGKSSLLAALRRREVP 421
++ G R +VG NG GKS+LL L VP
Sbjct: 520 IDMGTRVAIVGPNGAGKSTLLNLLAGDLVP 549
>At1g64550.1 68414.m07317 ABC transporter family protein similar to
ABC transporter protein GB:AAF31030 GI:6899653 from
[Leishmania major]
Length = 715
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 TGCAPCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREV 418
TG RDI + NF+++ G +L+ D + L+ GR YGLVG NG GK++ L + +
Sbjct: 166 TGGGSAIRDIHMDNFNVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAI 225
Query: 419 P-IPEHIDIFHL 451
IP + I H+
Sbjct: 226 EGIPTNCQILHV 237
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 242 GCAPCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVP 421
G + S +++ N S ++ G +L+D E+ G + GL+G+NG GK++ L + +E P
Sbjct: 76 GASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEP 135
Score = 33.9 bits (74), Expect = 0.081
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 266 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
+ + N F L L + G + ++G NGCGKS+LL + E P+
Sbjct: 411 VTVKNLVFGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPM 463
>At5g64840.1 68418.m08157 ABC transporter family protein
Length = 692
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 242 GCAPCSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVP 421
G + S +K+ N ++ G +L+D E+ G + GLVG+NG GK++ L + +E P
Sbjct: 90 GASGISSGVKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEP 149
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 266 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
+ + N F L + L + G + ++G NGCGKS+LL + E P+
Sbjct: 425 VNVKNIDFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPV 477
>At3g13100.1 68416.m01640 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]; contains Pfam profile: PF00005
ABC transporter
Length = 1493
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNC----GRRYGLVGLNGCGKSSLLAALRRREV 418
PC +I I N + YG L L L C G + G+VG GCGKS+L+ L R
Sbjct: 1236 PCRGEITICNLQVR-YGPHLPM-VLRGLTCTFRGGLKTGIVGRTGCGKSTLIQTLFRIVE 1293
Query: 419 PIPEHIDI 442
P I I
Sbjct: 1294 PAAGEIRI 1301
>At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1230
Score = 35.5 bits (78), Expect = 0.026
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 263 DIKIANFSITFYGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEH 433
DI++ + S T+ ++ +D L + G+ LVG +G GKS++++ L+R P H
Sbjct: 984 DIELCHISFTYQTRPDVQVFRDLCLSIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGH 1043
Query: 434 IDI 442
I +
Sbjct: 1044 ITL 1046
>At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1278
Score = 35.5 bits (78), Expect = 0.026
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 263 DIKIANFSITFYGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEH 433
DI++ + S T+ ++ +D L + G+ LVG +G GKS++++ L+R P H
Sbjct: 1031 DIELRHLSFTYPARPDIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGH 1090
Query: 434 IDI 442
I +
Sbjct: 1091 ITL 1093
>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1273
Score = 35.1 bits (77), Expect = 0.035
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +2
Query: 263 DIKIANFSITFY---GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
DI++ + S T+ G ++ +D L + G+ LVG +G GKS++++ L+R
Sbjct: 1026 DIELRHLSFTYPARPGIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLLQR 1077
>At4g01820.1 68417.m00239 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1229
Score = 33.9 bits (74), Expect = 0.081
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +2
Query: 263 DIKIANFSITFYGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEH 433
DI++ + S T+ ++ +D + G+ LVG +G GKS++++ L+R P H
Sbjct: 983 DIELCHISFTYQTRPDVQIFRDLCFAIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGH 1042
Query: 434 IDI 442
I +
Sbjct: 1043 ITL 1045
>At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1292
Score = 33.9 bits (74), Expect = 0.081
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ QD L + G+ LVG +G GKS+++A L+R
Sbjct: 1064 QIFQDLCLSIRAGKTIALVGESGSGKSTVIALLQR 1098
>At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
[Coptis japonica] GI:14715462, MDR-like p-glycoprotein
[Arabidopsis thaliana] GI:24324262; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1286
Score = 33.9 bits (74), Expect = 0.081
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ QD L + G+ LVG +G GKS+++A L+R
Sbjct: 1058 QIFQDLCLSIRAGKTVALVGESGSGKSTVIALLQR 1092
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 33.9 bits (74), Expect = 0.081
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ +D L G+ LVG +GCGKSS+++ ++R
Sbjct: 1040 QIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQR 1074
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++L + L + G+ LVG +G GKS++++ + R
Sbjct: 384 KILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIER 418
>At3g13090.1 68416.m01639 ABC transporter, putative similar to
MRP-like ABC transporter [Arabidopsis thaliana]
GI:2316016; contains Pfam profile: PF00005 ABC
transporter
Length = 1466
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNC----GRRYGLVGLNGCGKSSLLAALRRREV 418
P +I I N + YG L L L C G + G+VG GCGKS+L+ L R
Sbjct: 1214 PSRGEITICNLQVR-YGPHLPM-VLHGLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVE 1271
Query: 419 PIPEHIDI 442
P I I
Sbjct: 1272 PAAGEIRI 1279
>At4g33460.1 68417.m04753 ABC transporter family protein ABC-type
transport protein sll1623 -Synechocystis,PIR2:S74812
Length = 271
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 403
+L+D + G+ + ++G NGCGKS+LL L
Sbjct: 59 ILRDCSFRIPSGQLWMILGPNGCGKSTLLKIL 90
>At3g59140.1 68416.m06593 ABC transporter family protein putative
multi resistance protein mrp - Arabidopsis thaliana,
EMBL:ATMRPPROT
Length = 1453
Score = 30.7 bits (66), Expect = 0.75
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 266 IKIANFSITFYGSEL--LQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHID 439
IK A+FS GS L++ LE+ G + + G G GKS+LLAA+ + ID
Sbjct: 603 IKSASFSWEEKGSTKPNLRNVSLEVKFGEKVAVCGEVGSGKSTLLAAILGETPCVSGTID 662
Query: 440 IF 445
+
Sbjct: 663 FY 664
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 341 GRRYGLVGLNGCGKSSLLAALRRREVPI 424
G + G+VG G GK++L++AL R P+
Sbjct: 1234 GHKIGIVGRTGSGKTTLISALFRLVEPV 1261
>At3g28380.1 68416.m03546 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1240
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHI 436
+ D L++ G+ LVG +G GKS++++ L+R PI I
Sbjct: 376 IFDDLCLKIPAGKTVALVGGSGSGKSTVISLLQRFYDPIAGEI 418
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHIDI 442
+ ++ +E++ G+ +VG +G GKS+++ + R P+ + I
Sbjct: 1012 IFENFSIEIDEGKSTAIVGTSGSGKSTIIGLIERFYDPLKGTVKI 1056
>At5g02270.1 68418.m00150 ABC transporter family protein NBD-like
protein POP, Arabidopsis thaliana, EMBL:AF127664
Length = 328
Score = 30.3 bits (65), Expect = 1.00
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHIDI 442
L++D + LN R LVG NG GK+++L L + + P + +
Sbjct: 37 LIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRV 81
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 30.3 bits (65), Expect = 1.00
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
+ +D L + G LVG +G GKSS++A + R P+
Sbjct: 1027 VFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPL 1065
>At1g04120.1 68414.m00401 ABC transporter family protein Strong
similarity to MRP-like ABC transporter gb|U92650 from A.
thaliana and canalicular multi-drug resistance protein
gb|L49379 from Rattus norvegicus
Length = 1514
Score = 30.3 bits (65), Expect = 1.00
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 251 PCSRDIKIANFSITFYGSELLQDTLLELNC----GRRYGLVGLNGCGKSSLLAALRRREV 418
P + I++ + + + +E L L ++C G++ G+VG G GKS+L+ AL R
Sbjct: 1263 PATGTIELVDVKVRY--AENLPTVLHGVSCVFPGGKKIGIVGRTGSGKSTLIQALFRLIE 1320
Query: 419 PIPEHIDI 442
P I I
Sbjct: 1321 PTAGKITI 1328
>At1g04110.1 68414.m00400 subtilase family protein contains
similarity to subtilisin-like protease GI:3687307 from
[Lycopersicon esculentum]
Length = 775
Score = 30.3 bits (65), Expect = 1.00
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 350 YGLVGLNGCGKSSLLAALRRREVPIPEHIDIFHLTRGGARYPI 478
Y + NGC S +LAA+ +V I + +D+ L+ GG P+
Sbjct: 260 YKVCWFNGCYSSDILAAI---DVAIQDKVDVLSLSLGGFPIPL 299
>At2g41700.1 68415.m05151 ABC transporter family protein similar to
ATP-binding cassette transporter ABCA1 GI:18031705 from
[Arabidopsis thaliana]
Length = 1822
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 311 LQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVP 421
+Q + G +G +G NG GK++ L+ L E P
Sbjct: 1414 VQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETP 1450
>At5g46540.1 68418.m05730 ABC transporter family protein contains Pfam
profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1248
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ D L ++ G+ LVG +G GKS++++ L R
Sbjct: 1021 QIFSDLCLTISSGQTVALVGESGSGKSTVISLLER 1055
>At3g28415.1 68416.m03551 P-glycoprotein, putative contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1221
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
+ D L + G+ LVG +G GKS++++ L+R PI
Sbjct: 355 IFDDLCLRIPSGKSVALVGGSGSGKSTVISLLQRFYDPI 393
>At3g28390.1 68416.m03547 P-glycoprotein, putative similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1225
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHI 436
+ D L + G+ LVG +G GKS++++ L+R PI I
Sbjct: 364 IFDDLCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPIAGEI 406
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 1016
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 299 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
GSE + +LEL GLVG+ GKS+LL AL R
Sbjct: 814 GSEAV--LILELKSIADVGLVGMPNAGKSTLLGALSR 848
>At5g10930.1 68418.m01268 CBL-interacting protein kinase 5 (CIPK5)
identical to CBL-interacting protein kinase 5
GP|9280632|gb|AAF86504 [Arabidopsis thaliana]
Length = 445
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 263 DIKIANFSITFYGSELLQDTLLELNCG 343
D+KI++F ++ ++LQD LL CG
Sbjct: 148 DLKISDFGLSALPEQILQDGLLHTQCG 174
>At5g25110.1 68418.m02975 CBL-interacting protein kinase 25 (CIPK25)
identical to CBL-interacting protein kinase 25
[Arabidopsis thaliana] gi|17646697|gb|AAL41008
Length = 488
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 263 DIKIANFSITFYGSELLQDTLLELNCG 343
D+K+++F ++ ++LQD LL CG
Sbjct: 178 DLKVSDFGLSALPEQILQDGLLHTQCG 204
>At3g28360.1 68416.m03544 ABC transporter family protein similar to
P-glycoprotein homologue GI:2292907 from [Hordeum
vulgare subsp. vulgare]
Length = 1158
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 308 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
+ D L++ G+ LVG +G GKS++++ L+R
Sbjct: 293 IFDDLCLKIPSGKTVALVGGSGSGKSTVISLLQR 326
>At3g28345.1 68416.m03541 ABC transporter family protein similar to
P-glycoprotein [Arabidopsis thaliana] GI:3849833;
contains Pfam profiles PF00005: ABC transporter,
PF00664: ABC transporter transmembrane region
Length = 1240
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 302 SELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHI 436
+ + D L + G+ LVG +G GKS++++ L+R P+ I
Sbjct: 374 TSIFDDFCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPLAGEI 418
>At5g44110.1 68418.m05397 ABC transporter family protein
Length = 282
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 317 DTLLELNCGRRYGLVGLNGCGKSSLLAAL 403
D L+L G R LVG NG GK++LL L
Sbjct: 31 DFNLDLPAGSRCLLVGANGSGKTTLLKIL 59
>At4g25450.1 68417.m03665 ABC transporter family protein similar to
multidrug resistance protein 2 SP:P21440 from [Mus
musculus]
Length = 714
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREVPIPEHIDI 442
++L L LN G LVG +G GKS+++ L R P I +
Sbjct: 486 KVLDGLSLTLNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITV 531
>At4g18050.1 68417.m02686 ABC transporter family protein contains Pfam
profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1281
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 305 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRR 409
++ +D L + G+ LVG +G GKS++++ + R
Sbjct: 1009 QIFRDLCLTIPSGKTVALVGESGSGKSTVISMIER 1043
>At1g03905.1 68414.m00375 ABC transporter family protein similar to
NBD-like protein GB:AAD20643
Length = 290
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 317 DTLLELNCGRRYGLVGLNGCGKSSLLAAL 403
D L+L G R LVG NG GK++LL L
Sbjct: 32 DFNLDLPAGSRCLLVGANGSGKTTLLKIL 60
>At1g48550.1 68414.m05429 vacuolar protein sorting-associated
protein 26 family protein / VPS26 family protein
contains Pfam profile PF03643: Vacuolar protein
sorting-associated protein 26
Length = 327
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 272 IANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA-LRRREVPIPEHIDIFH 448
+ F TF+G+ + LL + R Y L+ + + + + E PIP I IF+
Sbjct: 107 VEKFYETFHGTNINIQYLLTADIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFY 166
Query: 449 LTRGGARYPIRP 484
+T+ R+P+ P
Sbjct: 167 ITQDTQRHPLLP 178
>At5g13610.1 68418.m01576 expressed protein
Length = 402
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 123 YHFRLRSSHEPPASCFCR*LAPSSS 49
+HF LRSS P CF +A S+S
Sbjct: 38 FHFSLRSSSNIPTRCFSNVVAKSNS 62
>At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter
(MRP2) almost identical to MgATP-energized glutathione
S-conjugate pump GI:2909781 from [Arabidopsis thaliana]
Length = 1623
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 347 RYGLVGLNGCGKSSLLAALRR 409
+ G+VG G GKSSLL AL R
Sbjct: 1271 KVGIVGRTGAGKSSLLNALFR 1291
>At1g53390.1 68414.m06052 ABC transporter family protein similar to
ATP-binding cassette, sub-family G, member 2
(Placenta-specific ATP- binding cassette transporter)
(Breast cancer resistance protein) SP:Q9UNQ0 from [Homo
sapiens]
Length = 1092
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 299 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALRRREV 418
G ++L+ + GR ++G +G GK+SLL+AL + V
Sbjct: 503 GKQVLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGKAV 542
>At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter
(MRP1) identical to glutathione S-conjugate transporting
ATPase (AtMRP1) [Arabidopsis thaliana] GI:2340166
Length = 1622
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 347 RYGLVGLNGCGKSSLLAALRR 409
+ G+VG G GKSSLL AL R
Sbjct: 1266 KVGIVGRTGAGKSSLLNALFR 1286
>At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1233
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 269 KIANFSITFYGSELLQDTL-LELNCGRRYGLVGLNGCGKSSLLAALRRREVPI 424
K A FS ++ D L L + G+ LVG +G GKS++++ + R PI
Sbjct: 364 KDATFSYPSRPDVVIFDRLNLAIPAGKIVALVGGSGSGKSTVISLIERFYEPI 416
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 356 LVGLNGCGKSSLLAALRRR--EVPIPEHIDIFHLTRGGARYPIRPIVSRITIHGRRFTNV 529
L G +GCGKS+L A L R + I H+ R A P++ T H + +
Sbjct: 144 LCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWASTYHAGEYLDP 203
Query: 530 V 532
V
Sbjct: 204 V 204
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 356 LVGLNGCGKSSLLAALRRR--EVPIPEHIDIFHLTRGGARYPIRPIVSRITIHGRRFTNV 529
L G +GCGKS+L A L R + I H+ R A P++ T H + +
Sbjct: 163 LCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWASTYHAGEYLDP 222
Query: 530 V 532
V
Sbjct: 223 V 223
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 329 ELNCGRRYGLVGLNGCGKSSLLAALRRREV 418
EL G++GL GKSSL+ +L+R V
Sbjct: 249 ELKKSITVGIIGLPNVGKSSLINSLKRAHV 278
>At2g07680.1 68415.m00992 ABC transporter family protein
Length = 1194
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 341 GRRYGLVGLNGCGKSSLLAALRR 409
G G++G G GKSS+L AL R
Sbjct: 985 GMHVGVIGRTGAGKSSILNALFR 1007
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,340,961
Number of Sequences: 28952
Number of extensions: 244494
Number of successful extensions: 667
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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