BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0287 (657 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866... 28 5.7 >04_04_0915 - 29385926-29385952,29386069-29386285,29386367-29386622, 29386745-29387072,29387157-29387587,29388014-29388163, 29388212-29388398,29388709-29388750,29389007-29389555, 29389778-29390032 Length = 813 Score = 28.3 bits (60), Expect = 5.7 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 127 F*FASLIGRIPVTINYLSNYLEKITHRILDQTY 29 F L+ RIP T SNY T+ +L++T+ Sbjct: 80 FQLLKLVKRIPETFTSSSNYFNSFTYPLLEETH 112 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,828,741 Number of Sequences: 37544 Number of extensions: 264230 Number of successful extensions: 465 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 465 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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