BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0245 (656 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31 SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06 SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 48 7e-06 SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 46 2e-05 SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 44 1e-04 SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 42 3e-04 SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04 SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04 SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 42 6e-04 SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001 SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002 SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 39 0.003 SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004 SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005 SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.007 SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.010 SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.022 SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.089 SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 34 0.12 SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 34 0.12 SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12 SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 32 0.36 SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 31 0.62 SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.62 SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.62 SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.62 SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1 SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49) 29 2.5 SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71) 29 2.5 SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.5 SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.4 SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 28 5.8 SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 7.7 SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24) 28 7.7 SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 28 7.7 >SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 304 Score = 133 bits (321), Expect = 1e-31 Identities = 68/132 (51%), Positives = 87/132 (65%), Gaps = 2/132 (1%) Frame = +2 Query: 41 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 214 SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S GI Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGI 186 Query: 215 IIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394 I+YR YFG YDT + ++ +VIS+ + VT AG+ SYP DT+RRRMMM SG A Sbjct: 187 IVYRGFYFGLYDTLKPILLGEDAGVVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGEA 246 Query: 395 KSDILYKNTIHC 430 + YK +I C Sbjct: 247 ---VKYKGSIDC 255 Score = 29.5 bits (63), Expect = 2.5 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = +2 Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNT 283 + G+ +C S+ ++S+G + +RG + +A F F D + PK T Sbjct: 53 YKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALFKPKKT 106 >SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 453 Score = 49.6 bits (113), Expect = 2e-06 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Frame = +2 Query: 53 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232 +YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ GII Y Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGI 302 Query: 233 YFGFYDTAR------HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQS 385 Y+T + H + +++ A +T + SYP VR R+ Q+ Sbjct: 303 DLAVYETLKNFYLNYHKNQSADPGVLVLLACGTASSTCGQLASYPLSLVRTRLQAQA 359 Score = 36.7 bits (81), Expect = 0.017 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Frame = +2 Query: 56 YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232 YPL RTRL A KG GQ + + + + KI DG GLYRG + + + Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRGLAPNFLKVAPAVSI 403 Query: 233 YFGFYDTARHAADPKNTP 286 + Y+ R K+ P Sbjct: 404 SYVVYENLRLGLGVKSYP 421 >SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 375 Score = 48.0 bits (109), Expect = 7e-06 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 5/114 (4%) Frame = +2 Query: 53 VYPLDFARTRLAAD-VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 229 VYP + +TRL V K + + G+ + + I + +G++ LY+G S G+ + Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAH--YKGMRHALKTILREEGILALYKGVTPSFLGLFPFAG 227 Query: 230 SYFGFYDTARHA----ADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMM 379 F Y +P TPI + + A +S+PFDT+R++M + Sbjct: 228 GSFLAYQILDKVDSTRTEPSATPICM-FVNGCVAGAFAHTLSHPFDTIRKKMQL 280 >SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) Length = 95 Score = 46.4 bits (105), Expect = 2e-05 Identities = 25/76 (32%), Positives = 41/76 (53%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217 T+ YPLD R RLA K +++GL N ++I++ +G+ YRG+ ++ GI+ Sbjct: 2 TAALLTYPLDMVRARLAITQKK-----KYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56 Query: 218 IYRASYFGFYDTARHA 265 Y F Y+T + A Sbjct: 57 PYAGISFFTYETCKKA 72 >SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 434 Score = 43.6 bits (98), Expect = 1e-04 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 2/117 (1%) Frame = +2 Query: 56 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 235 +PLD R RL ++G+ + + +I +G+ GLY+G S+ I + Sbjct: 47 HPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQ 106 Query: 236 FGFYDTAR-HAADPKNTPIVISWAIAQTVT-TVAGIISYPFDTVRRRMMMQSGRAKS 400 YD + A D ++ + + +A + +P D VRR+M + GR+ S Sbjct: 107 QSVYDIMKLRALDSAFAANSGTFLVCGAIAGMIAQTVVHPLDVVRRQMQVDRGRSGS 163 >SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 200 Score = 42.3 bits (95), Expect = 3e-04 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 15/150 (10%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF-GVSVQG 211 T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF S+ Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGFTPTSLSM 67 Query: 212 IIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAG-------------IISYPF 352 I ++ F K I +TV T G ++YP Sbjct: 68 IPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVLTAPGGLLCGALAGATSQTLAYPL 127 Query: 353 DTVRRRMMMQSGRAKSDILYKNTIHCWATI 442 D VRRRM + +G Y I+ + ++ Sbjct: 128 DVVRRRMQL-AGTVADGHKYSTCINTFISV 156 Score = 35.9 bits (79), Expect = 0.029 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVSVQGI 214 TS YPLD R R+ DG + +S N ++ DG+ GLYRG ++ + Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSINYLRV 177 Query: 215 IIYRASYFGFYDTAR 259 A F Y+ + Sbjct: 178 CPQVAVMFAVYEVVK 192 >SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 264 Score = 41.9 bits (94), Expect = 4e-04 Identities = 38/128 (29%), Positives = 48/128 (37%), Gaps = 14/128 (10%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG------V 199 T+ YPLD R+RLA V + G + CIS K G LY+GF V Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGFVPTLLTIV 134 Query: 200 SVQGIIIYRASYFGFYDTARHAADPKNTP--------IVISWAIAQTVTTVAGIISYPFD 355 GI Y Y A P I+ + V+ I+YP D Sbjct: 135 PAMGIGFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAGAVSQTIAYPLD 194 Query: 356 TVRRRMMM 379 VRRRM + Sbjct: 195 VVRRRMQL 202 Score = 38.3 bits (85), Expect = 0.005 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +2 Query: 41 SLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGFGVSVQGII 217 S YPLD R R+ DG + ++ N + ++K DG+ GLYRG ++ + Sbjct: 186 SQTIAYPLDVVRRRMQLAGAVPDGHK-YNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244 Query: 218 IYRASYFGFYDTAR 259 A FG Y+ + Sbjct: 245 PQVAIMFGVYEVTK 258 Score = 33.5 bits (73), Expect = 0.15 Identities = 21/93 (22%), Positives = 37/93 (39%) Frame = +2 Query: 152 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVA 331 I++++GL+ ++G G + Y A F Y+ ++P + A Sbjct: 20 IYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVLQT-SSPAINKLVAGSLAGMTA 78 Query: 332 GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHC 430 +YP D VR R+ Q + + TI C Sbjct: 79 CACTYPLDMVRSRLAFQVAQDQGYTTITQTIRC 111 >SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 611 Score = 41.9 bits (94), Expect = 4e-04 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Frame = +2 Query: 113 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKN---- 280 Q ++G +C+ K+F S+GL G +RG ++ I A YFG + PK Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELLTPKGEHVD 353 Query: 281 --TPIVISWAIAQTVTTVAGIISYPFDTVR 364 +PI + ++ T++ I++YP D V+ Sbjct: 354 NLSPIRLFFS-GGIAGTLSWILTYPVDMVK 382 Score = 38.7 bits (86), Expect = 0.004 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +2 Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY-DTARHAADPKNTPIVIS 298 ++G+ +C +I K + ++GLY+G + G+ + A FG +T R IS Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFGVQGETLRRLNGSGTMAQAIS 250 Query: 299 WAIAQTVTTVAGIISYPFDTVRRRMMMQ 382 AIA V + I+ P + + R+ +Q Sbjct: 251 GAIAGGVQS---IVCCPMELAKTRVQVQ 275 Score = 31.1 bits (67), Expect = 0.83 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 41 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190 S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422 >SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) Length = 773 Score = 41.5 bits (93), Expect = 6e-04 Identities = 16/52 (30%), Positives = 31/52 (59%) Frame = +2 Query: 119 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADP 274 ++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ + P Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641 Score = 37.1 bits (82), Expect = 0.013 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +2 Query: 56 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 235 YPLD R R+ + +G+G ++S + I +S+G IGL++G ++ + Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQ 757 Query: 236 FGFYDTARHA 265 F Y+ ++ A Sbjct: 758 FAVYEVSKSA 767 >SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 203 Score = 40.3 bits (90), Expect = 0.001 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 8/105 (7%) Frame = +2 Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAA------DPKNT 283 + G+ +C + +FK +G+ YR + + I ++ +F Y+ AR A DPK Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKTH 91 Query: 284 PI--VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILY 412 I + A+A +TT + +T R ++ G K + Y Sbjct: 92 VIAGATAGAVASAITTPLDVAKTLLNTQERSVVNLVGTPKGHVYY 136 >SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 313 Score = 39.5 bits (88), Expect = 0.002 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 56 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGII-IYRA 229 +PLD + RL G++ F+G +C K +++G GLY+G + G+ I+ Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAI 104 Query: 230 SYFGF 244 ++GF Sbjct: 105 CFWGF 109 >SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) Length = 1026 Score = 39.1 bits (87), Expect = 0.003 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 214 T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+ Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984 Score = 31.1 bits (67), Expect = 0.83 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 6/103 (5%) Frame = +2 Query: 143 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQ--- 313 I K + L R + +SV G FG+Y D T ++ +A+ Sbjct: 859 IMKTLRGHLLTPYVRAYLLSVAGGEAKHLVSFGYYRAFNSMLDNIRTLHGMTMKVAKGNR 918 Query: 314 --TVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCW 433 + G + YP D V+ RM Q +++ +YKN+I C+ Sbjct: 919 YKEIKKATGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCF 961 >SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 300 Score = 38.7 bits (86), Expect = 0.004 Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 3/110 (2%) Frame = +2 Query: 44 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIY 223 +C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G + Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPK 112 Query: 224 RASYFGFYDTARHAADPKNTPIVISWAIAQTV---TTVAGIISYPFDTVR 364 + F ++ ++ +N + +A + + A ++ P +T++ Sbjct: 113 ASVRFAVFEYLKNKMADENGKLTQFQTLASGLGAGVSEAVVVVCPMETIK 162 >SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 262 Score = 38.3 bits (85), Expect = 0.005 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 275 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATI 442 + P+ V+ +YP D VRRRM M+ RA D YK+T+H +++I Sbjct: 157 RELPVNFKLMCGSLAGAVSQTATYPLDVVRRRMQMKGIRA--DFAYKSTLHAFSSI 210 >SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) Length = 302 Score = 37.9 bits (84), Expect = 0.007 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190 T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267 >SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 274 Score = 37.5 bits (83), Expect = 0.010 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 3/129 (2%) Frame = +2 Query: 53 VYPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 229 + P+D + +L K + + G +C+ K+++S GL G ++G V+ I A Sbjct: 51 IAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFA 110 Query: 230 SYFGFYD-TARHAADPKNTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSD 403 YFG Y+ ++ + V ++ +A V S +PFD ++ R+ K Sbjct: 111 VYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGK-- 168 Query: 404 ILYKNTIHC 430 YK + C Sbjct: 169 FRYKGMMDC 177 >SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 1024 Score = 36.3 bits (80), Expect = 0.022 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 38 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 205 TSLC YP + ARTRL + G++++ + + + +G GLY G G V Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV 999 Score = 33.1 bits (72), Expect = 0.20 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 119 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 247 +FSG+ + K++G+ L++G G ++ G+ RA YF Y Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIY 815 >SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 306 Score = 34.3 bits (75), Expect = 0.089 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 47 CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 193 C P+D RTR G+ + G +CI K + +G++ LY+GF Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276 >SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) Length = 192 Score = 33.9 bits (74), Expect = 0.12 Identities = 14/45 (31%), Positives = 31/45 (68%) Frame = +2 Query: 59 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 193 P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156 >SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) Length = 247 Score = 33.9 bits (74), Expect = 0.12 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +2 Query: 74 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 196 R + V K G + + GLG+C+ +++++ GL G+++G G Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224 >SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 276 Score = 33.9 bits (74), Expect = 0.12 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Frame = +2 Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHA---ADPKNTPIV 292 + G+ + +FK++G+ +Y+G + + + + G YD + D +N I+ Sbjct: 66 YRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGDTDVQNPKIL 125 Query: 293 ISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKS 400 A + T +A ++ P + V+ R +GR S Sbjct: 126 KKIAASITTGIMAVSVAQPTEVVKIRFQADAGRYTS 161 >SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) Length = 205 Score = 32.3 bits (70), Expect = 0.36 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = +2 Query: 53 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232 V PLD + R+ D +++ + N K DG+ GL RG+ + G + Sbjct: 73 VVPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126 Query: 233 YFGFYD 250 FGFY+ Sbjct: 127 KFGFYE 132 >SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) Length = 233 Score = 31.5 bits (68), Expect = 0.62 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%) Frame = +2 Query: 59 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ----GIIIYR 226 P+D +L G+GD + + G I + F G G Y+G+ S+ I+ Sbjct: 125 PVDIISQKLMIQ-GQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSAIWW 183 Query: 227 ASYFGFYD--TARHAADPKNTPIVI-SWAIAQTVTTVAGIISYPFDTVRRRM 373 ASY GFY +AD + +V+ S + VT A ++ P D +R R+ Sbjct: 184 ASY-GFYTGVIGNLSADGTHRLLVLGSSGVLAGVT--AATLTNPLDVIRTRL 232 >SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 421 Score = 31.5 bits (68), Expect = 0.62 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 4/87 (4%) Frame = +2 Query: 128 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAI 307 G + I G GL++G+ +VQ + YDT +H K+T + +W + Sbjct: 176 GTFHAFRNIVDKYGFRGLWKGWLPNVQRAALVNMGDLTTYDTVKHNL-LKHTRLEDNWIV 234 Query: 308 AQTVTTVAGI----ISYPFDTVRRRMM 376 + +G+ IS P D ++ R+M Sbjct: 235 HSMSSVCSGLVAATISTPADVIKTRIM 261 >SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 328 Score = 31.5 bits (68), Expect = 0.62 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = +2 Query: 59 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 202 PLD R + + K G + G +C+ +I++ G+ G+Y+G V+ Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202 >SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) Length = 383 Score = 31.5 bits (68), Expect = 0.62 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 137 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 223 +C I++ +G+ G YRGFG + ++Y Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360 Score = 27.9 bits (59), Expect = 7.7 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = +2 Query: 203 VQGIIIYRASYFGFY-DTARHAADPKNTPIVISWAIAQTVTT-----VAGIISYPFDTVR 364 +Q +++ + + G Y DT DP T + + V V +I YPF+TV Sbjct: 240 IQHLVLIKMGHTGLYGDTRDCNEDPPPTSDMTQSYYPELVANFMAFVVPDLILYPFETVL 299 Query: 365 RRMMMQSGRAKSDIL 409 R+ +Q R D L Sbjct: 300 HRLYIQGTRTIIDDL 314 >SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 309 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +2 Query: 59 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 190 PLD + RL A G+ F G +C K + +GL GLY+G Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84 >SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1021 Score = 30.3 bits (65), Expect = 1.4 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = -2 Query: 400 ALGTTRLHHHAPTDCVEG--IGDDTGDCGYGLSDGPADYNGCVL-RVGSMP 257 A G R+H+ T + + +D GYG ++ P Y GC++ R+ S+P Sbjct: 461 ASGLPRMHYRQDTVRQKSLWVTEDALSPGYGKTEKPLGYRGCIIARIRSIP 511 >SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49) Length = 351 Score = 29.5 bits (63), Expect = 2.5 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 101 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPK 277 +G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D R PK Sbjct: 104 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVIMPK 157 >SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71) Length = 238 Score = 29.5 bits (63), Expect = 2.5 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 101 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPK 277 +G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D R PK Sbjct: 55 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVIMPK 108 >SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) Length = 272 Score = 29.5 bits (63), Expect = 2.5 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -3 Query: 132 RPENSRWPSPLPTSAARRVRAKSRGYTK 49 RP +SR S P+SA+RR ++SRG + Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248 >SB_31266| Best HMM Match : PKI (HMM E-Value=1) Length = 1507 Score = 28.7 bits (61), Expect = 4.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 219 MMIPCTDTPKPLYRPIRPSDLKILLMQ 139 +++PC P LYR +RP L+I + Q Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613 >SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) Length = 868 Score = 28.3 bits (60), Expect = 5.8 Identities = 20/113 (17%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Frame = +2 Query: 59 PLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232 P+D ++++ + + ++ + + I ++ G+ G Y+G ++ I Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280 Query: 233 YFGFYDTARHAADPKNTPIVISWAIAQTVTTVAG-----IISYPFDTVRRRMM 376 +FGFY+ ++ P+ + + + G ++YP D V+ MM Sbjct: 281 FFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAMGGFFYWFLTYPTDLVKSSMM 333 >SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) Length = 382 Score = 27.9 bits (59), Expect = 7.7 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 60 PLTSHVPVLPPMSVREMASVNSPVSET 140 PL H+P PP + +A+ N P+ ET Sbjct: 224 PLHPHIPPAPPNPSKAIATPNPPMPET 250 >SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24) Length = 553 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 54 CTPLTSHVPVLPPMSVREMASVNSPVSET 140 CTP+ S P+LP V + V+ SET Sbjct: 491 CTPVVSSKPILPEPEVTPLPEVSPKSSET 519 >SB_6969| Best HMM Match : Astacin (HMM E-Value=0) Length = 225 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 128 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFY 247 G C S + + G+ + GFG QG++++ + GFY Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,396,381 Number of Sequences: 59808 Number of extensions: 340647 Number of successful extensions: 980 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 879 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 970 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1681430875 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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