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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0245
         (656 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)             133   1e-31
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)                   48   7e-06
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)             46   2e-05
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)                    44   1e-04
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)                   42   3e-04
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)                   42   4e-04
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)                   42   4e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)           42   6e-04
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)                   40   0.001
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)                   40   0.002
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)             39   0.003
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.004
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.005
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)             38   0.007
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)                   38   0.010
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)                   36   0.022
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)                   34   0.089
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)         34   0.12 
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)         34   0.12 
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)                    34   0.12 
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)             32   0.36 
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)             31   0.62 
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)                   31   0.62 
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)                   31   0.62 
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)             31   0.62 
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)                   31   1.1  
SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49)                    29   2.5  
SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71)                    29   2.5  
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)                       29   2.5  
SB_31266| Best HMM Match : PKI (HMM E-Value=1)                         29   4.4  
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)             28   5.8  
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)                28   7.7  
SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24)                   28   7.7  
SB_6969| Best HMM Match : Astacin (HMM E-Value=0)                      28   7.7  

>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score =  133 bits (321), Expect = 1e-31
 Identities = 68/132 (51%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
 Frame = +2

Query: 41  SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 214
           SL FVY LD+ RTRLA D  VGK  G+R+F+G+ +   K   SDGL+GLYRGF +S  GI
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGI 186

Query: 215 IIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 394
           I+YR  YFG YDT +     ++  +VIS+ +   VT  AG+ SYP DT+RRRMMM SG A
Sbjct: 187 IVYRGFYFGLYDTLKPILLGEDAGVVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGEA 246

Query: 395 KSDILYKNTIHC 430
              + YK +I C
Sbjct: 247 ---VKYKGSIDC 255



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNT 283
           + G+ +C S+ ++S+G +  +RG   +       +A  F F D  +    PK T
Sbjct: 53  YKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALFKPKKT 106


>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
 Frame = +2

Query: 53  VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232
           +YPL+  +TRLA    +  GQ  + GL +  S I++ +G+   YRG   S+ GII Y   
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGI 302

Query: 233 YFGFYDTAR------HAADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQS 385
               Y+T +      H     +  +++  A     +T   + SYP   VR R+  Q+
Sbjct: 303 DLAVYETLKNFYLNYHKNQSADPGVLVLLACGTASSTCGQLASYPLSLVRTRLQAQA 359



 Score = 36.7 bits (81), Expect = 0.017
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +2

Query: 56  YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232
           YPL   RTRL A    KG GQ +   + + + KI   DG  GLYRG   +   +    + 
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRGLAPNFLKVAPAVSI 403

Query: 233 YFGFYDTARHAADPKNTP 286
            +  Y+  R     K+ P
Sbjct: 404 SYVVYENLRLGLGVKSYP 421


>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 375

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
 Frame = +2

Query: 53  VYPLDFARTRLAAD-VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 229
           VYP +  +TRL    V K +    + G+ + +  I + +G++ LY+G   S  G+  +  
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAH--YKGMRHALKTILREEGILALYKGVTPSFLGLFPFAG 227

Query: 230 SYFGFYDTARHA----ADPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMM 379
             F  Y           +P  TPI + +         A  +S+PFDT+R++M +
Sbjct: 228 GSFLAYQILDKVDSTRTEPSATPICM-FVNGCVAGAFAHTLSHPFDTIRKKMQL 280


>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
          Length = 95

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/76 (32%), Positives = 41/76 (53%)
 Frame = +2

Query: 38  TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 217
           T+    YPLD  R RLA    K     +++GL N  ++I++ +G+   YRG+  ++ GI+
Sbjct: 2   TAALLTYPLDMVRARLAITQKK-----KYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56

Query: 218 IYRASYFGFYDTARHA 265
            Y    F  Y+T + A
Sbjct: 57  PYAGISFFTYETCKKA 72


>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 434

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
 Frame = +2

Query: 56  YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 235
           +PLD  R RL            ++G+ + + +I   +G+ GLY+G   S+  I  +    
Sbjct: 47  HPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQ 106

Query: 236 FGFYDTAR-HAADPKNTPIVISWAIAQTVT-TVAGIISYPFDTVRRRMMMQSGRAKS 400
              YD  +  A D        ++ +   +   +A  + +P D VRR+M +  GR+ S
Sbjct: 107 QSVYDIMKLRALDSAFAANSGTFLVCGAIAGMIAQTVVHPLDVVRRQMQVDRGRSGS 163


>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 200

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
 Frame = +2

Query: 38  TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF-GVSVQG 211
           T+    YPLD  R+RLA  V     +  + G+   + +IF ++ G++ LYRGF   S+  
Sbjct: 11  TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGFTPTSLSM 67

Query: 212 IIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVAG-------------IISYPF 352
           I      ++ F          K     I     +TV T  G              ++YP 
Sbjct: 68  IPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVLTAPGGLLCGALAGATSQTLAYPL 127

Query: 353 DTVRRRMMMQSGRAKSDILYKNTIHCWATI 442
           D VRRRM + +G       Y   I+ + ++
Sbjct: 128 DVVRRRMQL-AGTVADGHKYSTCINTFISV 156



 Score = 35.9 bits (79), Expect = 0.029
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 38  TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVSVQGI 214
           TS    YPLD  R R+       DG + +S   N    ++  DG+  GLYRG  ++   +
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSINYLRV 177

Query: 215 IIYRASYFGFYDTAR 259
               A  F  Y+  +
Sbjct: 178 CPQVAVMFAVYEVVK 192


>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 264

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 38/128 (29%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
 Frame = +2

Query: 38  TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFG------V 199
           T+    YPLD  R+RLA  V +  G    +    CIS   K  G   LY+GF       V
Sbjct: 77  TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGFVPTLLTIV 134

Query: 200 SVQGIIIYRASYFGFYDTARHAADPKNTP--------IVISWAIAQTVTTVAGIISYPFD 355
              GI  Y       Y      A     P        I+  +        V+  I+YP D
Sbjct: 135 PAMGIGFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAGAVSQTIAYPLD 194

Query: 356 TVRRRMMM 379
            VRRRM +
Sbjct: 195 VVRRRMQL 202



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 41  SLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGFGVSVQGII 217
           S    YPLD  R R+       DG + ++   N +  ++K DG+  GLYRG  ++   + 
Sbjct: 186 SQTIAYPLDVVRRRMQLAGAVPDGHK-YNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244

Query: 218 IYRASYFGFYDTAR 259
              A  FG Y+  +
Sbjct: 245 PQVAIMFGVYEVTK 258



 Score = 33.5 bits (73), Expect = 0.15
 Identities = 21/93 (22%), Positives = 37/93 (39%)
 Frame = +2

Query: 152 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQTVTTVA 331
           I++++GL+  ++G G  +     Y A  F  Y+         ++P +            A
Sbjct: 20  IYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVLQT-SSPAINKLVAGSLAGMTA 78

Query: 332 GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHC 430
              +YP D VR R+  Q  + +       TI C
Sbjct: 79  CACTYPLDMVRSRLAFQVAQDQGYTTITQTIRC 111


>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 611

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
 Frame = +2

Query: 113 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKN---- 280
           Q  ++G  +C+ K+F S+GL G +RG  ++    I   A YFG +        PK     
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELLTPKGEHVD 353

Query: 281 --TPIVISWAIAQTVTTVAGIISYPFDTVR 364
             +PI + ++      T++ I++YP D V+
Sbjct: 354 NLSPIRLFFS-GGIAGTLSWILTYPVDMVK 382



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +2

Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY-DTARHAADPKNTPIVIS 298
           ++G+ +C  +I K + ++GLY+G    + G+ +  A  FG   +T R           IS
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFGVQGETLRRLNGSGTMAQAIS 250

Query: 299 WAIAQTVTTVAGIISYPFDTVRRRMMMQ 382
            AIA  V +   I+  P +  + R+ +Q
Sbjct: 251 GAIAGGVQS---IVCCPMELAKTRVQVQ 275



 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 41  SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190
           S    YP+D  ++   AD     G  Q +++G  +C+ KI+ S G+    +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422


>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
          Length = 773

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +2

Query: 119 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADP 274
           ++SG+G  ++KI++ +GL G ++G G ++  I+ Y A  F  Y+  +    P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641



 Score = 37.1 bits (82), Expect = 0.013
 Identities = 19/70 (27%), Positives = 36/70 (51%)
 Frame = +2

Query: 56  YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 235
           YPLD  R R+  +  +G+G  ++S   +    I +S+G IGL++G   ++  +       
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQ 757

Query: 236 FGFYDTARHA 265
           F  Y+ ++ A
Sbjct: 758 FAVYEVSKSA 767


>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 203

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
 Frame = +2

Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAA------DPKNT 283
           + G+ +C + +FK +G+   YR +   +   I ++  +F  Y+ AR A       DPK  
Sbjct: 32  YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKTH 91

Query: 284 PI--VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILY 412
            I    + A+A  +TT   +     +T  R ++   G  K  + Y
Sbjct: 92  VIAGATAGAVASAITTPLDVAKTLLNTQERSVVNLVGTPKGHVYY 136


>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 313

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 56  YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGII-IYRA 229
           +PLD  + RL        G++  F+G  +C  K  +++G  GLY+G    + G+  I+  
Sbjct: 45  HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAI 104

Query: 230 SYFGF 244
            ++GF
Sbjct: 105 CFWGF 109


>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
          Length = 1026

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +2

Query: 38   TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 214
            T    VYP+D  +TR+       + ++ +    +C  K+ +++G IGLYRG    + G+
Sbjct: 926  TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984



 Score = 31.1 bits (67), Expect = 0.83
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
 Frame = +2

Query: 143  ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAIAQ--- 313
            I K  +   L    R + +SV G        FG+Y       D   T   ++  +A+   
Sbjct: 859  IMKTLRGHLLTPYVRAYLLSVAGGEAKHLVSFGYYRAFNSMLDNIRTLHGMTMKVAKGNR 918

Query: 314  --TVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCW 433
               +    G  + YP D V+ RM  Q    +++ +YKN+I C+
Sbjct: 919  YKEIKKATGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCF 961


>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 300

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
 Frame = +2

Query: 44  LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIY 223
           +C  +P ++ +T+L  D  +   +  + G  +C+ K  K  G++GLYRG    + G +  
Sbjct: 55  ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPK 112

Query: 224 RASYFGFYDTARHAADPKNTPIVISWAIAQTV---TTVAGIISYPFDTVR 364
            +  F  ++  ++    +N  +     +A  +    + A ++  P +T++
Sbjct: 113 ASVRFAVFEYLKNKMADENGKLTQFQTLASGLGAGVSEAVVVVCPMETIK 162


>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 262

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = +2

Query: 275 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATI 442
           +  P+            V+   +YP D VRRRM M+  RA  D  YK+T+H +++I
Sbjct: 157 RELPVNFKLMCGSLAGAVSQTATYPLDVVRRRMQMKGIRA--DFAYKSTLHAFSSI 210


>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
          Length = 302

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 38  TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 190
           T+   V PLD  +TRL   + +  G+  ++G+ +C  KI+ ++GL   Y+G
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267


>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 274

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
 Frame = +2

Query: 53  VYPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 229
           + P+D  + +L      K   +  + G  +C+ K+++S GL G ++G  V+    I   A
Sbjct: 51  IAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFA 110

Query: 230 SYFGFYD-TARHAADPKNTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSD 403
            YFG Y+      ++   +  V ++ +A     V    S +PFD ++ R+       K  
Sbjct: 111 VYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGK-- 168

Query: 404 ILYKNTIHC 430
             YK  + C
Sbjct: 169 FRYKGMMDC 177


>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 1024

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = +2

Query: 38   TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 205
            TSLC  YP + ARTRL     +  G++++      +  + + +G  GLY G G  V
Sbjct: 946  TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV 999



 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 119 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 247
           +FSG+      + K++G+  L++G G ++ G+   RA YF  Y
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIY 815


>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 306

 Score = 34.3 bits (75), Expect = 0.089
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 47  CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 193
           C   P+D  RTR         G+   + G  +CI K  + +G++ LY+GF
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276


>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
          Length = 192

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/45 (31%), Positives = 31/45 (68%)
 Frame = +2

Query: 59  PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 193
           P+D A+TR+  ++   DG+ E+ G  + +++I +++G+  L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156


>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
          Length = 247

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +2

Query: 74  RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 196
           R +    V K  G +  + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224


>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 276

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = +2

Query: 122 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHA---ADPKNTPIV 292
           + G+   +  +FK++G+  +Y+G    +   + + +   G YD  +      D +N  I+
Sbjct: 66  YRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGDTDVQNPKIL 125

Query: 293 ISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKS 400
              A + T   +A  ++ P + V+ R    +GR  S
Sbjct: 126 KKIAASITTGIMAVSVAQPTEVVKIRFQADAGRYTS 161


>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
          Length = 205

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +2

Query: 53  VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232
           V PLD  + R+  D       +++  + N      K DG+ GL RG+  +  G  +    
Sbjct: 73  VVPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126

Query: 233 YFGFYD 250
            FGFY+
Sbjct: 127 KFGFYE 132


>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
          Length = 233

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
 Frame = +2

Query: 59  PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ----GIIIYR 226
           P+D    +L    G+GD + +  G    I + F   G  G Y+G+  S+        I+ 
Sbjct: 125 PVDIISQKLMIQ-GQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSAIWW 183

Query: 227 ASYFGFYD--TARHAADPKNTPIVI-SWAIAQTVTTVAGIISYPFDTVRRRM 373
           ASY GFY       +AD  +  +V+ S  +   VT  A  ++ P D +R R+
Sbjct: 184 ASY-GFYTGVIGNLSADGTHRLLVLGSSGVLAGVT--AATLTNPLDVIRTRL 232


>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 421

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = +2

Query: 128 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPKNTPIVISWAI 307
           G  +    I    G  GL++G+  +VQ   +        YDT +H    K+T +  +W +
Sbjct: 176 GTFHAFRNIVDKYGFRGLWKGWLPNVQRAALVNMGDLTTYDTVKHNL-LKHTRLEDNWIV 234

Query: 308 AQTVTTVAGI----ISYPFDTVRRRMM 376
               +  +G+    IS P D ++ R+M
Sbjct: 235 HSMSSVCSGLVAATISTPADVIKTRIM 261


>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 328

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 59  PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 202
           PLD  R +    + K  G   + G  +C+ +I++  G+ G+Y+G  V+
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202


>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
          Length = 383

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 137 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 223
           +C   I++ +G+ G YRGFG  +   ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360



 Score = 27.9 bits (59), Expect = 7.7
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = +2

Query: 203 VQGIIIYRASYFGFY-DTARHAADPKNTPIVISWAIAQTVTT-----VAGIISYPFDTVR 364
           +Q +++ +  + G Y DT     DP  T  +      + V       V  +I YPF+TV 
Sbjct: 240 IQHLVLIKMGHTGLYGDTRDCNEDPPPTSDMTQSYYPELVANFMAFVVPDLILYPFETVL 299

Query: 365 RRMMMQSGRAKSDIL 409
            R+ +Q  R   D L
Sbjct: 300 HRLYIQGTRTIIDDL 314


>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 309

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 59  PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 190
           PLD  + RL A      G+   F G  +C  K  + +GL GLY+G
Sbjct: 40  PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84


>SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -2

Query: 400 ALGTTRLHHHAPTDCVEG--IGDDTGDCGYGLSDGPADYNGCVL-RVGSMP 257
           A G  R+H+   T   +   + +D    GYG ++ P  Y GC++ R+ S+P
Sbjct: 461 ASGLPRMHYRQDTVRQKSLWVTEDALSPGYGKTEKPLGYRGCIIARIRSIP 511


>SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49)
          Length = 351

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 101 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPK 277
           +G+  +E +GLG+ +  +  S G IGL    G  VQ +I+ + +  G  D  R    PK
Sbjct: 104 EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVIMPK 157


>SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71)
          Length = 238

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 101 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARHAADPK 277
           +G+  +E +GLG+ +  +  S G IGL    G  VQ +I+ + +  G  D  R    PK
Sbjct: 55  EGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVIMPK 108


>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
          Length = 272

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 132 RPENSRWPSPLPTSAARRVRAKSRGYTK 49
           RP +SR  S  P+SA+RR  ++SRG  +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248


>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
          Length = 1507

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 219 MMIPCTDTPKPLYRPIRPSDLKILLMQ 139
           +++PC   P  LYR +RP  L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613


>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
          Length = 868

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/113 (17%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
 Frame = +2

Query: 59  PLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 232
           P+D  ++++   +   +     ++  + +    I ++ G+ G Y+G   ++   I     
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280

Query: 233 YFGFYDTARHAADPKNTPIVISWAIAQTVTTVAG-----IISYPFDTVRRRMM 376
           +FGFY+  ++   P+   +     +    +   G      ++YP D V+  MM
Sbjct: 281 FFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAMGGFFYWFLTYPTDLVKSSMM 333


>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
          Length = 382

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 60  PLTSHVPVLPPMSVREMASVNSPVSET 140
           PL  H+P  PP   + +A+ N P+ ET
Sbjct: 224 PLHPHIPPAPPNPSKAIATPNPPMPET 250


>SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24)
          Length = 553

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 54  CTPLTSHVPVLPPMSVREMASVNSPVSET 140
           CTP+ S  P+LP   V  +  V+   SET
Sbjct: 491 CTPVVSSKPILPEPEVTPLPEVSPKSSET 519


>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 225

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 128 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFY 247
           G   C S + +  G+  +  GFG   QG++++   +  GFY
Sbjct: 88  GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,396,381
Number of Sequences: 59808
Number of extensions: 340647
Number of successful extensions: 980
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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