BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0230 (660 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 140 5e-35 AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 2.8 AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 2.8 AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 24 3.7 DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 24 4.9 CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 6.5 AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 23 8.5 >AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8 protein. Length = 261 Score = 140 bits (338), Expect = 5e-35 Identities = 69/109 (63%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+V Sbjct: 77 IAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASV 136 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HNPD K +RVKLP +++ LPS R G KPILKAGR Sbjct: 137 IAHNPDTKRTRVKLPSGAKKVLPSANRAMVG-IVAGGGRIDKPILKAGR 184 Score = 134 bits (325), Expect = 2e-33 Identities = 80/170 (47%), Positives = 100/170 (58%), Gaps = 2/170 (1%) Frame = +1 Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225 AQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDP Sbjct: 7 AQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDP 66 Query: 226 YKFKTRKELLLLPKGS-TQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVV 402 Y+F+ K+L + +G T ++ R Q +C + ++ + Sbjct: 67 YRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKL 126 Query: 403 WHVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549 + + + R PSGAKKV ++MVGIVAGGGRI Sbjct: 127 ARTSGNYASV-IAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRI 175 >AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein protein. Length = 763 Score = 24.6 bits (51), Expect = 2.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +1 Query: 136 RHGYIKGVVKDIIHDP 183 R+ +K ++KDI+HDP Sbjct: 737 RYTMLKDMIKDIMHDP 752 >AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein protein. Length = 763 Score = 24.6 bits (51), Expect = 2.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +1 Query: 136 RHGYIKGVVKDIIHDP 183 R+ +K ++KDI+HDP Sbjct: 737 RYTMLKDMIKDIMHDP 752 >AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein protein. Length = 338 Score = 24.2 bits (50), Expect = 3.7 Identities = 6/13 (46%), Positives = 11/13 (84%) Frame = +3 Query: 513 EHGRYCCWRWTYC 551 +HG++CC R ++C Sbjct: 283 QHGQHCCCRGSHC 295 >DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24 protein. Length = 378 Score = 23.8 bits (49), Expect = 4.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 407 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 279 C+T SIT + LRH +S ++S +L ++KLA Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221 >CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. Length = 1494 Score = 23.4 bits (48), Expect = 6.5 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -2 Query: 581 GXPSSFQNRFAIRPPPATIP 522 G P S FA+ PPPA P Sbjct: 481 GTPRSTPVPFALAPPPAASP 500 >AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter protein. Length = 570 Score = 23.0 bits (47), Expect = 8.5 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -3 Query: 517 CSVLDGRPSWLQTGSFTLDGLASGLCPITV 428 C L P +QTG+ T+D S L +T+ Sbjct: 460 CLWLQEHPGAIQTGNQTVDSTLSVLLGMTI 489 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 733,516 Number of Sequences: 2352 Number of extensions: 16107 Number of successful extensions: 35 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 34 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 65650335 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -