SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0230
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8 pr...   136   7e-32
BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8 pr...   136   7e-32
BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8 pr...   136   7e-32
Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8 prot...   136   9e-32
CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.                136   9e-32
BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8 pr...   136   9e-32
BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8 pr...   136   9e-32
BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.        136   9e-32
AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8 pr...   136   9e-32
AB007168-1|BAA25829.1|  130|Homo sapiens ribosomal protein L8 pr...   121   3e-27
AF132956-1|AAD27731.1|  353|Homo sapiens CGI-22 protein protein.       36   0.097
BC020212-1|AAH20212.1|  305|Homo sapiens mitochondrial ribosomal...    34   0.39 
BC013685-1|AAH13685.1|  305|Homo sapiens mitochondrial ribosomal...    34   0.39 
AL355385-2|CAI13780.1|  302|Homo sapiens protein ( Human DNA seq...    34   0.39 
BC020543-1|AAH20543.1|  478|Homo sapiens carbohydrate kinase-lik...    33   1.2  
AF168787-1|AAF43103.1|  478|Homo sapiens CARKL protein.                33   1.2  
AF163573-1|AAF24936.1|  478|Homo sapiens CARKL protein.                33   1.2  
BC071733-1|AAH71733.1|  457|Homo sapiens retinoic acid receptor,...    30   6.4  
BC022782-1|AAH22782.1|  780|Homo sapiens bromo adjacent homology...    30   6.4  
AF283809-1|AAF87249.1|   54|Homo sapiens retinoic acid receptor ...    30   6.4  
AB023162-1|BAA76789.2|  797|Homo sapiens KIAA0945 protein protein.     30   6.4  

>BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (329), Expect = 7e-32
 Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (329), Expect = 7e-32
 Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (329), Expect = 7e-32
 Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (328), Expect = 9e-32
 Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.
          Length = 257

 Score =  136 bits (328), Expect = 9e-32
 Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (328), Expect = 9e-32
 Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (328), Expect = 9e-32
 Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.
          Length = 211

 Score =  136 bits (328), Expect = 9e-32
 Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 31  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 90

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 91  ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 138



 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
 Frame = +1

Query: 166 DIIHDPGRGAPLAVVHFRDPYKFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXX 342
           DIIHDPGRGAPLA V FRDPY+FK R EL +  +G  T   ++  ++ Q           
Sbjct: 1   DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60

Query: 343 XXXRVPLCAILKRKWVIEVVWHVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSM 519
                 +C + ++      +       + + +       +     PSG+KKV     +++
Sbjct: 61  MPEGTIVCCLEEKPGDRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAV 119

Query: 520 VGIVAGGGRI 549
           VG+VAGGGRI
Sbjct: 120 VGVVAGGGRI 129


>AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  136 bits (328), Expect = 9e-32
 Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNP+ K +RVKLP  S++ + S  R   G          KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184



 Score =  126 bits (303), Expect = 9e-29
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67

Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
           +FK R EL +  +G  T   ++  ++ Q                 +C + ++      + 
Sbjct: 68  RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127

Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
                 + + +       +     PSG+KKV     +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175


>AB007168-1|BAA25829.1|  130|Homo sapiens ribosomal protein L8
           protein.
          Length = 130

 Score =  121 bits (291), Expect = 3e-27
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = +1

Query: 49  QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
           QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 4   QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 63

Query: 229 KFKTRKELLLLPKG 270
           +FK R EL +  +G
Sbjct: 64  RFKKRTELFIAAEG 77



 Score =  104 bits (249), Expect = 3e-22
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 428
           IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 73  IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130


>AF132956-1|AAD27731.1|  353|Homo sapiens CGI-22 protein protein.
          Length = 353

 Score = 36.3 bits (80), Expect = 0.097
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
 Frame = +3

Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
           +IA E +  G  +    + G+ A     G+  P+GA+P GT++ N+E + G   +  RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210

Query: 417 GNFATVI----GHNPDAKPSRVKLPV 482
           G    ++    GH+    PS+ ++ V
Sbjct: 211 GTCGVLLRKVNGHSIIQLPSKRQMQV 236


>BC020212-1|AAH20212.1|  305|Homo sapiens mitochondrial ribosomal
           protein L2 protein.
          Length = 305

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +3

Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
           +IA E +  G  +    + G+ A     G+  P+GA+P GT++ N+E + G   +  RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210

Query: 417 GNFATVI 437
           G    ++
Sbjct: 211 GTCGVLL 217


>BC013685-1|AAH13685.1|  305|Homo sapiens mitochondrial ribosomal
           protein L2 protein.
          Length = 305

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +3

Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
           +IA E +  G  +    + G+ A     G+  P+GA+P GT++ N+E + G   +  RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210

Query: 417 GNFATVI 437
           G    ++
Sbjct: 211 GTCGVLL 217


>AL355385-2|CAI13780.1|  302|Homo sapiens protein ( Human DNA
           sequence from clone RP11-387M24 on chromosome 6 Contains
            the 5' end of a gene for a novel protein (KIAA0076
           KIAA0708), the  ).
          Length = 302

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +3

Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
           +IA E +  G  +    + G+ A     G+  P+GA+P GT++ N+E + G   +  RA+
Sbjct: 148 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 207

Query: 417 GNFATVI 437
           G    ++
Sbjct: 208 GTCGVLL 214


>BC020543-1|AAH20543.1|  478|Homo sapiens carbohydrate kinase-like
           protein.
          Length = 478

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = -3

Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
           VHL         + GR S  W +    T  G+A G    +V      R    L+   S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283

Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
           L   +PSG  P     PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308


>AF168787-1|AAF43103.1|  478|Homo sapiens CARKL protein.
          Length = 478

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = -3

Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
           VHL         + GR S  W +    T  G+A G    +V      R    L+   S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283

Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
           L   +PSG  P     PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308


>AF163573-1|AAF24936.1|  478|Homo sapiens CARKL protein.
          Length = 478

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = -3

Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
           VHL         + GR S  W +    T  G+A G    +V      R    L+   S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283

Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
           L   +PSG  P     PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308


>BC071733-1|AAH71733.1|  457|Homo sapiens retinoic acid receptor,
           alpha protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -2

Query: 275 VEPFGSNKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 150
           VE  G   + FLV++ Y  +R C    KG P PG +   L TPL
Sbjct: 5   VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48


>BC022782-1|AAH22782.1|  780|Homo sapiens bromo adjacent homology
           domain containing 1 protein.
          Length = 780

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 213 LPRSIQVQDKEGALIAPEGLYTGQF-VYCGKKATLEVGNVMPVGAMPEGTI 362
           LP      D  G  + PE    G F +YCG++  L+ G   P   +PEG +
Sbjct: 355 LPMPGNPADYNGLCVGPELTALGSFYLYCGQEG-LQCGGYSPCPMLPEGKL 404


>AF283809-1|AAF87249.1|   54|Homo sapiens retinoic acid receptor
           alpha 2 isoform protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -2

Query: 275 VEPFGSNKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 150
           VE  G   + FLV++ Y  +R C    KG P PG +   L TPL
Sbjct: 5   VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48


>AB023162-1|BAA76789.2|  797|Homo sapiens KIAA0945 protein protein.
          Length = 797

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 213 LPRSIQVQDKEGALIAPEGLYTGQF-VYCGKKATLEVGNVMPVGAMPEGTI 362
           LP      D  G  + PE    G F +YCG++  L+ G   P   +PEG +
Sbjct: 373 LPMPGNPADYNGLCVGPELTALGSFYLYCGQEG-LQCGGYSPCPMLPEGKL 422


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,155,546
Number of Sequences: 237096
Number of extensions: 2393487
Number of successful extensions: 4871
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4862
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -