BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0229 (666 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 2.2 AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2 AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.2 AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2 AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.2 AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.2 AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.2 AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.2 X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 9.1 U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 9.1 U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.1 >EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering hormone receptorisoform B protein. Length = 451 Score = 23.0 bits (47), Expect = 2.2 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 46 VAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEP 159 +A L P L I + DG +VF +EDT P Sbjct: 197 IAALFTSPILAITQYGPEEYVDGSIVFVCFSLVEDTLP 234 >AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188 Query: 418 DRRGRN 435 + G++ Sbjct: 189 SKSGQS 194 >AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax protein. Length = 230 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188 Query: 418 DRRGRN 435 + G++ Sbjct: 189 SKSGQS 194 >AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188 Query: 418 DRRGRN 435 + G++ Sbjct: 189 SKSGQS 194 >AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax protein. Length = 297 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188 Query: 418 DRRGRN 435 + G++ Sbjct: 189 SKSGQS 194 >AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax protein. Length = 268 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 85 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 144 Query: 418 DRRGRN 435 + G++ Sbjct: 145 SKSGQS 150 >AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188 Query: 418 DRRGRN 435 + G++ Sbjct: 189 SKSGQS 194 >AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr protein. Length = 312 Score = 23.0 bits (47), Expect = 2.2 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417 L+ P N + T S+G + TSPP K + S+ L S + S +S T Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188 Query: 418 DRRGRN 435 + G++ Sbjct: 189 SKSGQS 194 >X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium castaneum mRNAfor alhpa amylase 3'region. ). Length = 489 Score = 21.0 bits (42), Expect = 9.1 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 196 WADSGVQECFGRSNE 240 W+D Q FGR N+ Sbjct: 404 WSDGNQQIAFGRGNK 418 >U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II protein. Length = 490 Score = 21.0 bits (42), Expect = 9.1 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 196 WADSGVQECFGRSNE 240 W+D Q FGR N+ Sbjct: 405 WSDGNQQIAFGRGNK 419 >U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I protein. Length = 490 Score = 21.0 bits (42), Expect = 9.1 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 196 WADSGVQECFGRSNE 240 W+D Q FGR N+ Sbjct: 405 WSDGNQQIAFGRGNK 419 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 148,735 Number of Sequences: 336 Number of extensions: 3147 Number of successful extensions: 12 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 17281430 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -