BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0229 (666 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g26300.1 68415.m03156 guanine nucleotide binding protein (G-p... 80 1e-15 At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 44 1e-04 At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 43 2e-04 At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 43 2e-04 At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 43 2e-04 At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 43 2e-04 At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 43 2e-04 At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 43 2e-04 At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 43 2e-04 At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 42 4e-04 At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 41 9e-04 At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 40 0.001 At1g09180.1 68414.m01025 GTP-binding protein, putative strong si... 38 0.006 At4g34390.1 68417.m04885 extra-large guanine nucleotide binding ... 35 0.042 At2g23460.1 68415.m02801 extra-large guanine nucleotide binding ... 35 0.056 At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 32 0.39 At1g64050.1 68414.m07255 expressed protein 32 0.39 At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical t... 31 0.52 At3g62560.1 68416.m07028 GTP-binding protein, putative similar t... 31 0.69 At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical t... 31 0.69 At5g09850.1 68418.m01139 transcription elongation factor-related... 28 4.9 At5g64470.2 68418.m08100 expressed protein similar to unknown pr... 27 8.5 At5g64470.1 68418.m08099 expressed protein similar to unknown pr... 27 8.5 At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 27 8.5 At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family pr... 27 8.5 At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 27 8.5 >At2g26300.1 68415.m03156 guanine nucleotide binding protein (G-protein) alpha-1 subunit / GP-alpha-1 (GPA1) identical to SP|P18064 Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) {Arabidopsis thaliana} Length = 383 Score = 80.2 bits (189), Expect = 1e-15 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 6/77 (7%) Frame = +3 Query: 261 KYFLDDLDRLGAKDYQPTEQDILRTXVKTTGIXEVHFSFKNLN------FKLFDVGGQXS 422 KY +++L RL +Y PT++D+L V+TTG+ E+ FS N ++LFDVGGQ + Sbjct: 165 KYLMENLKRLSDINYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRN 224 Query: 423 ERKKWIHCFEDVTAIIF 473 ER+KWIH FE VTA+IF Sbjct: 225 ERRKWIHLFEGVTAVIF 241 Score = 28.3 bits (60), Expect = 4.9 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +1 Query: 148 DTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLND 255 D ++++ ++ LW D +QE R NE Q+ D Sbjct: 127 DYPRLTKDIAEGIETLWKDPAIQETCARGNELQVPD 162 >At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar to ADP-ribosylation factor (GI:861205) [Chlamydomonas reinhardtii] Length = 205 Score = 43.6 bits (98), Expect = 1e-04 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +3 Query: 333 TXVKTTGIXEVHFSFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXV 479 T V T G +K +NF ++D+GGQ RK W H F++ +IF V Sbjct: 44 TTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVV 92 >At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus carota]. Length = 188 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical to ADP-ribosylation factor ARF1({Arabidopsis thaliana} (SP:P36397) (GP:166586) Length = 181 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana] Length = 181 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana] Length = 181 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly identical to ADP-ribosylation factor 1 GB:P36397 [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana] Length = 181 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis thaliana], ADP-ribosylation factor GI:166586 [Arabidopsis thaliana] Length = 181 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar to ADP-ribosylation factor GI:166586 from [Arabidopsis thaliana] Length = 181 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 231 FQRVPTQRSAKYFLDDLDRLGAKD--YQPTEQDILRTXVKTTGIXEVHFSFKNLNFKLFD 404 F R+ ++ + + LD G Y+ +I+ T + T G +KN++F ++D Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 67 Query: 405 VGGQXSERKKWIHCFEDVTAIIFXV 479 VGGQ R W H F++ +IF V Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIFVV 92 >At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP:166586 ADP-ribosylation factor {Arabidopsis thaliana}; ADP-ribosylation factor 1 - Arabidopsis thaliana, PIR:S28875 Length = 181 Score = 41.9 bits (94), Expect = 4e-04 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +3 Query: 333 TXVKTTGIXEVHFSFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXV 479 T + T G +KN++F ++DVGGQ R W H F++ +IF V Sbjct: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 92 >At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster) Length = 192 Score = 40.7 bits (91), Expect = 9e-04 Identities = 21/60 (35%), Positives = 31/60 (51%) Frame = +3 Query: 321 DILRTXVKTTGIXEVHFSFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 ++L T V T G +KN+ F ++DVGGQ R W H F + +I+ V L+ R Sbjct: 41 EVLST-VPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRER 99 >At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster} Length = 192 Score = 40.3 bits (90), Expect = 0.001 Identities = 21/60 (35%), Positives = 31/60 (51%) Frame = +3 Query: 321 DILRTXVKTTGIXEVHFSFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 ++L T V T G +KN+ F ++DVGGQ R W H F + +I+ V L+ R Sbjct: 41 EVLST-VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRER 99 >At1g09180.1 68414.m01025 GTP-binding protein, putative strong similarity to SP:Q01474 GTP-binding protein SAR1B and SP:O04834 GTP-binding protein SAR1A [Arabidopsis thaliana] Length = 193 Score = 37.9 bits (84), Expect = 0.006 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +3 Query: 372 SFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 S +NFK FD+GG R+ W C+ V A+++ V + R Sbjct: 60 SIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDR 102 >At4g34390.1 68417.m04885 extra-large guanine nucleotide binding protein, putative / G-protein, putative similar to extra-large G-protein (XLG) [Arabidopsis thaliana] GI:3201680; contains Pfam profile PF00503: G-protein alpha subunit Length = 861 Score = 35.1 bits (77), Expect = 0.042 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Frame = +3 Query: 99 PR-KRW*DGVRRDSTDGGHGTVQ*GASRRDEKALGRLWR-SGVLWSFQRV--PTQRSAKY 266 PR K + D V ++ DG +SR + + + LWR + +++R+ R+A Y Sbjct: 547 PRLKHFSDWVLKEKEDGNLKIFP-PSSRENAQTVADLWRVPAIQATYKRLRDTLPRNAVY 605 Query: 267 FLDDLDRLGAKDYQPTEQDILRTXVKTT--GIXEVHFSF 377 FL+ + + +Y P++ DIL+ ++ G+ V FSF Sbjct: 606 FLERILEISRSEYDPSDMDILQAEGLSSMEGLSCVDFSF 644 >At2g23460.1 68415.m02801 extra-large guanine nucleotide binding protein / G-protein (XLG) identical to extra-large G-protein (XLG) [Arabidopsis thaliana] GI:3201680 Length = 888 Score = 34.7 bits (76), Expect = 0.056 Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 25/152 (16%) Frame = +3 Query: 99 PR-KRW*DGVRRDSTDGGHGTVQ*GASRRDEKALGRLWRSGVLWSFQRVPTQRS-----A 260 PR K + D + + G G + ASR + LWR + + + ++ A Sbjct: 581 PRLKAFSDWLLKTMAAGNLGVIFPAASREYAPLVEELWRDAAIQATYKRRSELGLLPSVA 640 Query: 261 KYFLDDLDRLGAKDYQPTEQDIL--RTXVKTTGIXEVHFSFKN----------------L 386 YFL+ + DY+P++ DIL ++G+ + FSF L Sbjct: 641 SYFLERAIDVLTPDYEPSDLDILYAEGVTSSSGLACLDFSFPQTASEENLDPSDHHDSLL 700 Query: 387 NFKLFDVGGQ-XSERKKWIHCFEDVTAIIFXV 479 ++L V + E KWI FEDV ++F V Sbjct: 701 RYQLIRVPSRGLGENCKWIDMFEDVGMVVFVV 732 >At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar to ADP-ribosylation factor GB:P91924 [Dugesia japonica] Length = 183 Score = 31.9 bits (69), Expect = 0.39 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +3 Query: 345 TTGIXEVHFSFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 T G +KN+ F+++D+GGQ R W + A+I + + R Sbjct: 48 TVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRAR 99 >At1g64050.1 68414.m07255 expressed protein Length = 668 Score = 31.9 bits (69), Expect = 0.39 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = +2 Query: 320 RYPKDXSQNDWNRRSTFLLQKPQFQIVRRGRAXIGEEEMDSLLRGRDRDHILXAMSEYXQ 499 R+PK SQ R + L++KP + R R + +++S +++H+ + Sbjct: 537 RWPKKLSQKSMKARKSKLIEKP----LERHRTTVSSIDLNSSNNNNNKNHVRKDSAAEHN 592 Query: 500 VXHRMKHEPYAGELKXSTYLXNNGS-PTHSS 589 H H + LK ST S P+ SS Sbjct: 593 HHHHHHHPKPSKRLKLSTMENKKRSFPSSSS 623 >At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical to SP:O04834 GTP-binding protein SAR1A. [Arabidopsis thaliana] Length = 193 Score = 31.5 bits (68), Expect = 0.52 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Frame = +3 Query: 207 WRSGVLWSFQRVPTQRSAKYFLDDLDRLGAKDY-QPTEQDILRTXVKTTGIXEVHFSFKN 383 W GVL S Q+ AK LD G + + L T S Sbjct: 6 WFYGVLASLGL--WQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGK 63 Query: 384 LNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 + FK FD+GG R+ W + V A+++ V + R Sbjct: 64 IKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKER 102 >At3g62560.1 68416.m07028 GTP-binding protein, putative similar to GTP-binding protein SAR1A (SP:O04834) [Arabidopsis thaliana]; small GTP-binding protein Bsar1a - Brassica campestris, EMBL:U55035 Length = 193 Score = 31.1 bits (67), Expect = 0.69 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 372 SFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 S + FK FD+GG R+ W + V A+++ V + R Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKER 102 >At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical to GTP-binding protein (SAR1B) [Arabidopsis thaliana] SP:Q01474 Length = 193 Score = 31.1 bits (67), Expect = 0.69 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 372 SFKNLNFKLFDVGGQXSERKKWIHCFEDVTAIIFXVPCLNMXR 500 S + FK FD+GG R+ W + V A+++ V + R Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKER 102 >At5g09850.1 68418.m01139 transcription elongation factor-related low similarity to SP|P10712 Transcription elongation factor S-II (Transcription elongation factor A) {Mus musculus} Length = 353 Score = 28.3 bits (60), Expect = 4.9 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -3 Query: 217 PERQSRPRAFSSRREAPH*TVPCPPSVESRRTP 119 PER+ RP A RRE+P P PS + P Sbjct: 258 PERKPRPVAPQPRRESPSPAKPSRPSPSQQTIP 290 >At5g64470.2 68418.m08100 expressed protein similar to unknown protein (gb|AAD15463.1) Length = 407 Score = 27.5 bits (58), Expect = 8.5 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 281 RPVRSKGLPAHRTRYPKDXSQNDWNRRSTFLLQKP 385 R V +K L R + P+ DWN+ + LL KP Sbjct: 275 REVPAKTLKFWRLQSPRHFYGGDWNQNGSCLLDKP 309 >At5g64470.1 68418.m08099 expressed protein similar to unknown protein (gb|AAD15463.1) Length = 325 Score = 27.5 bits (58), Expect = 8.5 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 281 RPVRSKGLPAHRTRYPKDXSQNDWNRRSTFLLQKP 385 R V +K L R + P+ DWN+ + LL KP Sbjct: 275 REVPAKTLKFWRLQSPRHFYGGDWNQNGSCLLDKP 309 >At5g09410.1 68418.m01090 calmodulin-binding protein similar to anther ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from [Nicotiana tabacum] Length = 1007 Score = 27.5 bits (58), Expect = 8.5 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 15/89 (16%) Frame = +1 Query: 64 MPNLGIIYGNRDRESDGKMVFDV---------IQRMEDTEPFSEELLAAMKRLWADSGV- 213 M N+ ++GNR RESD + + DV + R D +P+ LL M+ DS + Sbjct: 212 MRNVSQVHGNRVRESDSQRLVDVRALDTVGNSLTRFHD-QPYCNNLLTQMQPSNTDSMLV 270 Query: 214 ---QECFGRSNEYQLNDPL--NISWTTST 285 E GR + +PL +W T Sbjct: 271 EENSEKGGRLKAEHIRNPLQTQFNWQDDT 299 >At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family protein / kinesin motor family protein Length = 919 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -1 Query: 276 RPGNI*RIVELVLVGTTKALLNARVGPEPFHRGEKLLTERF 154 R + R++ GT + L +GP P HRGE T F Sbjct: 365 RDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETTSTIMF 405 >At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family protein / kinesin motor family protein similar to kinesin-like protein GB:CAB41097 GI:5541717 from [Arabidopsis thaliana]; contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat Length = 894 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -1 Query: 276 RPGNI*RIVELVLVGTTKALLNARVGPEPFHRGEKLLTERF 154 R + R++ GT + L +GP P HRGE T F Sbjct: 355 RDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETTSTILF 395 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,194,706 Number of Sequences: 28952 Number of extensions: 287825 Number of successful extensions: 844 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 843 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1403159472 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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