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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0227
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97335-1|CAA66000.1|  903|Homo sapiens kinase A anchor protein  ...    47   5e-05
BC000729-1|AAH00729.1|  903|Homo sapiens A kinase (PRKA) anchor ...    47   5e-05
X78137-1|CAA55016.1|  356|Homo sapiens hnRNP-E1 protein.               34   0.39 
X72727-1|CAA51267.1|  464|Homo sapiens transformation upregulate...    34   0.39 
U97188-1|AAC35208.1|  579|Homo sapiens putative RNA binding prot...    34   0.39 
U76705-1|AAD09223.1|  579|Homo sapiens Koc1 protein.                   34   0.39 
U24223-1|AAA91317.1|  356|Homo sapiens alpha-CP1 protein.              34   0.39 
S74678-1|AAB20770.1|  463|Homo sapiens heterogeneous nuclear rib...    34   0.39 
CR456771-1|CAG33052.1|  464|Homo sapiens HNRPK protein.                34   0.39 
BC039742-1|AAH39742.1|  356|Homo sapiens poly(rC) binding protei...    34   0.39 
BC014980-1|AAH14980.1|  463|Homo sapiens heterogeneous nuclear r...    34   0.39 
BC012061-1|AAH12061.1|  313|Homo sapiens PCBP3 protein protein.        34   0.39 
BC000355-1|AAH00355.1|  464|Homo sapiens heterogeneous nuclear r...    34   0.39 
AY911506-1|AAW84289.1|  464|Homo sapiens heterogeneous nuclear r...    34   0.39 
AY780793-1|AAV98363.1|  361|Homo sapiens poly(rC) binding protei...    34   0.39 
AL354733-11|CAI16021.1|  464|Homo sapiens heterogeneous nuclear ...    34   0.39 
AL354733-10|CAI16020.1|  463|Homo sapiens heterogeneous nuclear ...    34   0.39 
AL354733-9|CAI16019.1|  428|Homo sapiens heterogeneous nuclear r...    34   0.39 
AK094301-1|BAC04327.1|  351|Homo sapiens protein ( Homo sapiens ...    34   0.39 
AF176329-1|AAG09240.1|  339|Homo sapiens alphaCP-3 protein.            34   0.39 
AC016700-1|AAX93191.1|  356|Homo sapiens unknown protein.              34   0.39 
AB209562-1|BAD92799.1|  442|Homo sapiens heterogeneous nuclear r...    34   0.39 
BC017098-1|AAH17098.1|  360|Homo sapiens PCBP4 protein protein.        34   0.51 
BC004153-1|AAH04153.1|  403|Homo sapiens poly(rC) binding protei...    34   0.51 
BC003008-1|AAH03008.1|  403|Homo sapiens poly(rC) binding protei...    34   0.51 
AK023993-1|BAB14761.1|  403|Homo sapiens protein ( Homo sapiens ...    34   0.51 
AF257772-1|AAG02186.1|  424|Homo sapiens RNA binding protein MCG...    34   0.51 
AF257771-1|AAG02185.1|  369|Homo sapiens RNA binding protein MCG...    34   0.51 
AF257770-1|AAG02184.1|  424|Homo sapiens RNA binding protein MCG...    34   0.51 
AF176330-1|AAG09241.1|  403|Homo sapiens alphaCP-4 protein.            34   0.51 
AF141340-1|AAG49443.1|  276|Homo sapiens LYST-interacting protei...    34   0.51 
AF092441-1|AAP97216.1|  397|Homo sapiens CBP protein.                  34   0.51 
X78136-1|CAA55015.1|  365|Homo sapiens hnRNP-E2 protein.               33   0.89 
AB208825-1|BAD92062.1|  373|Homo sapiens poly(rC)-binding protei...    33   0.89 
BC107688-1|AAI07689.1|  335|Homo sapiens PCBP2 protein protein.        33   1.2  
BC071942-1|AAH71942.1|  366|Homo sapiens poly(rC) binding protei...    33   1.2  
BC001155-1|AAH01155.1|  362|Homo sapiens poly(rC) binding protei...    33   1.2  
AB188306-1|BAD36897.1|  331|Homo sapiens poly(rC) binding protei...    33   1.2  
U05040-1|AAA17976.2|  644|Homo sapiens FUSE binding protein prot...    31   2.7  
BC065269-1|AAH65269.1|  579|Homo sapiens insulin-like growth fac...    31   2.7  
BC017247-1|AAH17247.1|  653|Homo sapiens FUBP1 protein protein.        31   2.7  
AF117108-1|AAD09828.1|  579|Homo sapiens IGF-II mRNA-binding pro...    31   2.7  
AB209366-1|BAD92603.1|  493|Homo sapiens far upstream element-bi...    31   2.7  
U04840-1|AAA16022.1|  510|Homo sapiens onconeural ventral antige...    31   3.6  
BC075039-1|AAH75039.1|  507|Homo sapiens neuro-oncological ventr...    31   3.6  
BC075038-1|AAH75038.1|  507|Homo sapiens neuro-oncological ventr...    31   3.6  
BC013399-1|AAH13399.1|  447|Homo sapiens integrin alpha FG-GAP r...    31   4.7  
BC006552-1|AAH06552.1|  447|Homo sapiens integrin alpha FG-GAP r...    31   4.7  
AK027483-1|BAB55145.1|  447|Homo sapiens protein ( Homo sapiens ...    31   4.7  
X69962-1|CAA49586.1|  632|Homo sapiens protein ( H.sapiens FMR-1...    30   6.3  
U69127-1|AAC50893.1|  600|Homo sapiens FUSE binding protein 3 pr...    30   6.3  
S65791-1|AAB28395.2|  632|Homo sapiens FMR1 protein.                   30   6.3  
M67468-1|AAA52458.1|  657|Homo sapiens FMR1 protein.                   30   6.3  
L29074-6|AAB18829.1|  590|Homo sapiens fragile X mental retardat...    30   6.3  
L29074-5|AAB18830.1|  607|Homo sapiens fragile X mental retardat...    30   6.3  
L29074-4|AAB18831.1|  603|Homo sapiens fragile X mental retardat...    30   6.3  
L29074-3|AAB18828.1|  620|Homo sapiens fragile X mental retardat...    30   6.3  
L29074-2|AAB18832.1|  615|Homo sapiens fragile X mental retardat...    30   6.3  
L29074-1|AAB18833.1|  632|Homo sapiens fragile X mental retardat...    30   6.3  
L19483-1|AAA62459.1|   57|Homo sapiens FMR1 protein.                   30   6.3  
BC086957-1|AAH86957.1|  586|Homo sapiens FMR1 protein protein.         30   6.3  
BC038998-1|AAH38998.1|  297|Homo sapiens FMR1 protein protein.         30   6.3  
BC007874-1|AAH07874.1|  261|Homo sapiens FUBP3 protein protein.        30   6.3  
AL359092-4|CAM45745.1|  261|Homo sapiens far upstream element (F...    30   6.3  
AL359092-2|CAM45743.1|  572|Homo sapiens far upstream element (F...    30   6.3  
AL353695-2|CAH70961.1|  261|Homo sapiens far upstream element (F...    30   6.3  
AL353695-1|CAH70960.1|  572|Homo sapiens far upstream element (F...    30   6.3  
AB209188-1|BAD92425.1|  527|Homo sapiens fragile X mental retard...    30   6.3  
U25165-1|AAC50155.1|  621|Homo sapiens FXR1 protein.                   30   8.3  
BC028983-1|AAH28983.1|  539|Homo sapiens fragile X mental retard...    30   8.3  
AY341428-1|AAQ20045.1|  536|Homo sapiens fragile X mental retard...    30   8.3  

>X97335-1|CAA66000.1|  903|Homo sapiens kinase A anchor protein
           protein.
          Length = 903

 Score = 47.2 bits (107), Expect = 5e-05
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = +2

Query: 83  PTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVE 253
           P + DL I +  + ++LVG LIGK G +V+ +K  +GA +Y+   P +   +IC +E
Sbjct: 602 PKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYISTLPYTQSVQICHIE 658



 Score = 35.9 bits (79), Expect = 0.13
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 370 PLIPEFLQLQLVESVNNDTILTCLVSAGHFFLQQPLHPTF 489
           P +P    L L + +  + I+   V+AGH F+QQ  HPTF
Sbjct: 694 PSLPMTSWLMLPDGITVEVIVVNQVNAGHLFVQQHTHPTF 733


>BC000729-1|AAH00729.1|  903|Homo sapiens A kinase (PRKA) anchor
           protein 1 protein.
          Length = 903

 Score = 47.2 bits (107), Expect = 5e-05
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = +2

Query: 83  PTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVE 253
           P + DL I +  + ++LVG LIGK G +V+ +K  +GA +Y+   P +   +IC +E
Sbjct: 602 PKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYISTLPYTQSVQICHIE 658



 Score = 35.9 bits (79), Expect = 0.13
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 370 PLIPEFLQLQLVESVNNDTILTCLVSAGHFFLQQPLHPTF 489
           P +P    L L + +  + I+   V+AGH F+QQ  HPTF
Sbjct: 694 PSLPMTSWLMLPDGITVEVIVVNQVNAGHLFVQQHTHPTF 733


>X78137-1|CAA55016.1|  356|Homo sapiens hnRNP-E1 protein.
          Length = 356

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           H+  +  NL+G +IG+ G+ + +I+  +GA + +    E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322


>X72727-1|CAA51267.1|  464|Homo sapiens transformation upregulated
           nuclear protein protein.
          Length = 464

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>U97188-1|AAC35208.1|  579|Homo sapiens putative RNA binding protein
           KOC protein.
          Length = 579

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 35  GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
           G   A +PP        TET   +HQF+ + + VG +IGK G  + Q+    GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHQFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441


>U76705-1|AAD09223.1|  579|Homo sapiens Koc1 protein.
          Length = 579

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 35  GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
           G   A +PP        TET   +HQF+ + + VG +IGK G  + Q+    GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHQFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441


>U24223-1|AAA91317.1|  356|Homo sapiens alpha-CP1 protein.
          Length = 356

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           H+  +  NL+G +IG+ G+ + +I+  +GA + +    E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322


>S74678-1|AAB20770.1|  463|Homo sapiens heterogeneous nuclear
           ribonucleoprotein complex K protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>CR456771-1|CAG33052.1|  464|Homo sapiens HNRPK protein.
          Length = 464

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>BC039742-1|AAH39742.1|  356|Homo sapiens poly(rC) binding protein 1
           protein.
          Length = 356

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           H+  +  NL+G +IG+ G+ + +I+  +GA + +    E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322


>BC014980-1|AAH14980.1|  463|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>BC012061-1|AAH12061.1|  313|Homo sapiens PCBP3 protein protein.
          Length = 313

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S ++
Sbjct: 238 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 281


>BC000355-1|AAH00355.1|  464|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 464

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>AY911506-1|AAW84289.1|  464|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K transcript variant protein.
          Length = 464

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>AY780793-1|AAV98363.1|  361|Homo sapiens poly(rC) binding protein 3
           protein.
          Length = 361

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S ++
Sbjct: 286 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 329


>AL354733-11|CAI16021.1|  464|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 464

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>AL354733-10|CAI16020.1|  463|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437


>AL354733-9|CAI16019.1|  428|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K protein.
          Length = 428

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 356 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 402


>AK094301-1|BAC04327.1|  351|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
           POLY(RC) BINDING PROTEIN 2. ).
          Length = 351

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S ++
Sbjct: 276 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 319


>AF176329-1|AAG09240.1|  339|Homo sapiens alphaCP-3 protein.
          Length = 339

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S ++
Sbjct: 264 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 307


>AC016700-1|AAX93191.1|  356|Homo sapiens unknown protein.
          Length = 356

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           H+  +  NL+G +IG+ G+ + +I+  +GA + +    E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322


>AB209562-1|BAD92799.1|  442|Homo sapiens heterogeneous nuclear
           ribonucleoprotein K isoform a variant protein.
          Length = 442

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           Q  + ++L G +IGK G  + QI+ ++GAS+ +    E S+ +I  +
Sbjct: 369 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 415


>BC017098-1|AAH17098.1|  360|Homo sapiens PCBP4 protein protein.
          Length = 360

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 182 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241

Query: 230 KQK 238
            ++
Sbjct: 242 GER 244


>BC004153-1|AAH04153.1|  403|Homo sapiens poly(rC) binding protein 4
           protein.
          Length = 403

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284

Query: 230 KQK 238
            ++
Sbjct: 285 GER 287


>BC003008-1|AAH03008.1|  403|Homo sapiens poly(rC) binding protein 4
           protein.
          Length = 403

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284

Query: 230 KQK 238
            ++
Sbjct: 285 GER 287


>AK023993-1|BAB14761.1|  403|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13931 fis, clone Y79AA1000752, moderately
           similar to PUTATIVE HETEROGENEOUS NUCLEAR
           RIBONUCLEOPROTEIN X. ).
          Length = 403

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284

Query: 230 KQK 238
            ++
Sbjct: 285 GER 287


>AF257772-1|AAG02186.1|  424|Homo sapiens RNA binding protein MCG10
           protein.
          Length = 424

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 246 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 305

Query: 230 KQK 238
            ++
Sbjct: 306 GER 308


>AF257771-1|AAG02185.1|  369|Homo sapiens RNA binding protein MCG10
           protein.
          Length = 369

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 191 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 250

Query: 230 KQK 238
            ++
Sbjct: 251 GER 253


>AF257770-1|AAG02184.1|  424|Homo sapiens RNA binding protein MCG10
           protein.
          Length = 424

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 246 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 305

Query: 230 KQK 238
            ++
Sbjct: 306 GER 308


>AF176330-1|AAG09241.1|  403|Homo sapiens alphaCP-4 protein.
          Length = 403

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284

Query: 230 KQK 238
            ++
Sbjct: 285 GER 287


>AF141340-1|AAG49443.1|  276|Homo sapiens LYST-interacting protein
           LIP4 protein.
          Length = 276

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 68  PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 127

Query: 230 KQK 238
            ++
Sbjct: 128 GER 130


>AF092441-1|AAP97216.1|  397|Homo sapiens CBP protein.
          Length = 397

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
 Frame = +2

Query: 59  PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
           P A+ ++VP     T     +F++  +L+G +IG+ GS +++I+  +GA + +    E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284

Query: 230 KQK 238
            ++
Sbjct: 285 GER 287


>X78136-1|CAA55015.1|  365|Homo sapiens hnRNP-E2 protein.
          Length = 365

 Score = 33.1 bits (72), Expect = 0.89
 Identities = 14/65 (21%), Positives = 31/65 (47%)
 Frame = +2

Query: 44  EAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPE 223
           E++SP       +        H+  +  +L+G +IG+ G+ + +I+  +GA + +    E
Sbjct: 269 ESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 328

Query: 224 SSKQK 238
            S  +
Sbjct: 329 GSTDR 333


>AB208825-1|BAD92062.1|  373|Homo sapiens poly(rC)-binding protein 2
           isoform b variant protein.
          Length = 373

 Score = 33.1 bits (72), Expect = 0.89
 Identities = 14/65 (21%), Positives = 31/65 (47%)
 Frame = +2

Query: 44  EAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPE 223
           E++SP       +        H+  +  +L+G +IG+ G+ + +I+  +GA + +    E
Sbjct: 277 ESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 336

Query: 224 SSKQK 238
            S  +
Sbjct: 337 GSTDR 341


>BC107688-1|AAI07689.1|  335|Homo sapiens PCBP2 protein protein.
          Length = 335

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/44 (25%), Positives = 25/44 (56%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S  +
Sbjct: 260 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 303


>BC071942-1|AAH71942.1|  366|Homo sapiens poly(rC) binding protein 2
           protein.
          Length = 366

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/44 (25%), Positives = 25/44 (56%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S  +
Sbjct: 291 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 334


>BC001155-1|AAH01155.1|  362|Homo sapiens poly(rC) binding protein 2
           protein.
          Length = 362

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/44 (25%), Positives = 25/44 (56%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S  +
Sbjct: 287 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 330


>AB188306-1|BAD36897.1|  331|Homo sapiens poly(rC) binding protein 2
           protein.
          Length = 331

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/44 (25%), Positives = 25/44 (56%)
 Frame = +2

Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
           H+  +  +L+G +IG+ G+ + +I+  +GA + +    E S  +
Sbjct: 256 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 299


>U05040-1|AAA17976.2|  644|Homo sapiens FUSE binding protein
           protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 98  LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
           L+   F++     GL+IGK G  +  I  ++GA + ++R+P
Sbjct: 376 LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 416


>BC065269-1|AAH65269.1|  579|Homo sapiens insulin-like growth factor
           2 mRNA binding protein 3 protein.
          Length = 579

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +2

Query: 35  GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
           G   A +PP        TET   +H F+ + + VG +IGK G  + Q+    GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441


>BC017247-1|AAH17247.1|  653|Homo sapiens FUBP1 protein protein.
          Length = 653

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 98  LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
           L+   F++     GL+IGK G  +  I  ++GA + ++R+P
Sbjct: 375 LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 415


>AF117108-1|AAD09828.1|  579|Homo sapiens IGF-II mRNA-binding
           protein 3 protein.
          Length = 579

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +2

Query: 35  GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
           G   A +PP        TET   +H F+ + + VG +IGK G  + Q+    GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441


>AB209366-1|BAD92603.1|  493|Homo sapiens far upstream
           element-binding protein variant protein.
          Length = 493

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 98  LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
           L+   F++     GL+IGK G  +  I  ++GA + ++R+P
Sbjct: 226 LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 266


>U04840-1|AAA16022.1|  510|Homo sapiens onconeural ventral antigen-1
           protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +2

Query: 47  AASPPPASLNIVPTE--TD--LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRR 214
           AASP  AS  I+ TE  TD    + +  + +NLVG ++GK G  + + +  TGA + + +
Sbjct: 404 AASPLAASA-ILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 462

Query: 215 HPE 223
             E
Sbjct: 463 KGE 465


>BC075039-1|AAH75039.1|  507|Homo sapiens neuro-oncological ventral
           antigen 1 protein.
          Length = 507

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +2

Query: 47  AASPPPASLNIVPTE--TD--LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRR 214
           AASP  AS  I+ TE  TD    + +  + +NLVG ++GK G  + + +  TGA + + +
Sbjct: 401 AASPLAASA-ILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 459

Query: 215 HPE 223
             E
Sbjct: 460 KGE 462


>BC075038-1|AAH75038.1|  507|Homo sapiens neuro-oncological ventral
           antigen 1 protein.
          Length = 507

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +2

Query: 47  AASPPPASLNIVPTE--TD--LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRR 214
           AASP  AS  I+ TE  TD    + +  + +NLVG ++GK G  + + +  TGA + + +
Sbjct: 401 AASPLAASA-ILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 459

Query: 215 HPE 223
             E
Sbjct: 460 KGE 462


>BC013399-1|AAH13399.1|  447|Homo sapiens integrin alpha FG-GAP
           repeat containing 2 protein.
          Length = 447

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +2

Query: 14  GSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGS 163
           GS  + +G ++ +   PA+ ++V  +T  RIH   +S +L+G +   HG+
Sbjct: 219 GSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGT 268


>BC006552-1|AAH06552.1|  447|Homo sapiens integrin alpha FG-GAP
           repeat containing 2 protein.
          Length = 447

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +2

Query: 14  GSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGS 163
           GS  + +G ++ +   PA+ ++V  +T  RIH   +S +L+G +   HG+
Sbjct: 219 GSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGT 268


>AK027483-1|BAB55145.1|  447|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14577 fis, clone NT2RM4001155, moderately
           similar to ADRENAL MEDULLA 50 KD PROTEIN. ).
          Length = 447

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +2

Query: 14  GSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGS 163
           GS  + +G ++ +   PA+ ++V  +T  RIH   +S +L+G +   HG+
Sbjct: 219 GSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGT 268


>X69962-1|CAA49586.1|  632|Homo sapiens protein ( H.sapiens FMR-1
           mRNA. ).
          Length = 632

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>U69127-1|AAC50893.1|  600|Homo sapiens FUSE binding protein 3
           protein.
          Length = 600

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           +F +   +VG +IG+ G  +++I+A++G  + +        ++ C +
Sbjct: 109 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 155


>S65791-1|AAB28395.2|  632|Homo sapiens FMR1 protein.
          Length = 632

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>M67468-1|AAA52458.1|  657|Homo sapiens FMR1 protein.
          Length = 657

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 283 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 316


>L29074-6|AAB18829.1|  590|Homo sapiens fragile X mental retardation
           syndrome protein protein.
          Length = 590

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>L29074-5|AAB18830.1|  607|Homo sapiens fragile X mental retardation
           syndrome protein protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>L29074-4|AAB18831.1|  603|Homo sapiens fragile X mental retardation
           syndrome protein protein.
          Length = 603

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>L29074-3|AAB18828.1|  620|Homo sapiens fragile X mental retardation
           syndrome protein protein.
          Length = 620

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>L29074-2|AAB18832.1|  615|Homo sapiens fragile X mental retardation
           syndrome protein protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>L29074-1|AAB18833.1|  632|Homo sapiens fragile X mental retardation
           syndrome protein protein.
          Length = 632

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>L19483-1|AAA62459.1|   57|Homo sapiens FMR1 protein.
          Length = 57

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 8   RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 41


>BC086957-1|AAH86957.1|  586|Homo sapiens FMR1 protein protein.
          Length = 586

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324


>BC038998-1|AAH38998.1|  297|Homo sapiens FMR1 protein protein.
          Length = 297

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251


>BC007874-1|AAH07874.1|  261|Homo sapiens FUBP3 protein protein.
          Length = 261

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           +F +   +VG +IG+ G  +++I+A++G  + +        ++ C +
Sbjct: 21  EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 67


>AL359092-4|CAM45745.1|  261|Homo sapiens far upstream element
           (FUSE) binding protein 3 protein.
          Length = 261

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           +F +   +VG +IG+ G  +++I+A++G  + +        ++ C +
Sbjct: 21  EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 67


>AL359092-2|CAM45743.1|  572|Homo sapiens far upstream element
           (FUSE) binding protein 3 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           +F +   +VG +IG+ G  +++I+A++G  + +        ++ C +
Sbjct: 81  EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 127


>AL353695-2|CAH70961.1|  261|Homo sapiens far upstream element
           (FUSE) binding protein 3 protein.
          Length = 261

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           +F +   +VG +IG+ G  +++I+A++G  + +        ++ C +
Sbjct: 21  EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 67


>AL353695-1|CAH70960.1|  572|Homo sapiens far upstream element
           (FUSE) binding protein 3 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
           +F +   +VG +IG+ G  +++I+A++G  + +        ++ C +
Sbjct: 81  EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 127


>AB209188-1|BAD92425.1|  527|Homo sapiens fragile X mental
           retardation 1 variant protein.
          Length = 527

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           R H QF++ ++L+GL IG HG+ + Q +   G +
Sbjct: 134 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 167



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
           +NLVG +IGK+G  + +I  K+G  V VR   E+ K
Sbjct: 206 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 240


>U25165-1|AAC50155.1|  621|Homo sapiens FXR1 protein.
          Length = 621

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           +FV+ ++L+GL IG HGS + Q +   G +
Sbjct: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVT 251


>BC028983-1|AAH28983.1|  539|Homo sapiens fragile X mental
           retardation, autosomal homolog 1 protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           +FV+ ++L+GL IG HGS + Q +   G +
Sbjct: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVT 251


>AY341428-1|AAQ20045.1|  536|Homo sapiens fragile X mental
           retardation autosomal homolog 1-like protein protein.
          Length = 536

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
           +FV+ ++L+GL IG HGS + Q +   G +
Sbjct: 137 EFVVREDLMGLAIGTHGSNIQQARKVPGVT 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,939,741
Number of Sequences: 237096
Number of extensions: 1895504
Number of successful extensions: 5251
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 4978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5251
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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