BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0214 (660 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 26 0.24 AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 25 0.73 AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 24 1.3 EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 23 2.9 EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 21 6.8 AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 9.0 AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 9.0 AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 9.0 AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 9.0 AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 9.0 >AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment homeodomain protein protein. Length = 232 Score = 26.2 bits (55), Expect = 0.24 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +2 Query: 152 PPITRCCLETKKTAKSPRT 208 PPI RC L K + PRT Sbjct: 102 PPIVRCALRKHKPNRKPRT 120 >AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor protein protein. Length = 585 Score = 24.6 bits (51), Expect = 0.73 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = -3 Query: 88 YCKAE*GVLAPVPCPSRGTCTRRHA 14 +C+++ A PC + G CT HA Sbjct: 334 HCESKVNFCATSPCQNGGVCTTIHA 358 Score = 23.0 bits (47), Expect = 2.2 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = -3 Query: 91 AYCKAE*GVLAPVPCPSRGTC 29 +YC+ E PC + GTC Sbjct: 179 SYCQTEINECDSAPCQNGGTC 199 >AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less protein. Length = 312 Score = 23.8 bits (49), Expect = 1.3 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +2 Query: 104 GTKCPADHRCRHYHSLPPITRCCLETKKTAKSPRTNPLRS 223 GT P++ RH TR + T +PRT P S Sbjct: 261 GTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPASS 300 >EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive peptide receptor 1 protein. Length = 374 Score = 22.6 bits (46), Expect = 2.9 Identities = 15/47 (31%), Positives = 19/47 (40%) Frame = +2 Query: 125 HRCRHYHSLPPITRCCLETKKTAKSPRTNPLRSLDRSGRRPTSHPRK 265 H CR SLPP + + KK T +S S +H RK Sbjct: 313 HFCRTLGSLPPF-KWLFKKKKRRNRESTTNTQSSSLSEFLTNTHKRK 358 >EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglucosaminidase NAG2 protein. Length = 593 Score = 21.4 bits (43), Expect = 6.8 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +2 Query: 17 VPASTSTAAGARNWRQNTSLSFTISKSSCGTKC 115 V S T GAR+ + S + ++ GTKC Sbjct: 168 VQISAPTIFGARHGLETLSQLMDVYPNNDGTKC 200 >AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. Length = 199 Score = 21.0 bits (42), Expect = 9.0 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = -3 Query: 91 AYCKAE*GVLAPVPCPSRGTCTRRHA 14 A C +P PC + G+C R A Sbjct: 101 ALCNINTDDCSPNPCRNNGSCVDRIA 126 >AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase protein. Length = 539 Score = 21.0 bits (42), Expect = 9.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 427 ADPAPRISSMRPTDTTRDHQ 486 AD P I +M DT+R+H+ Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464 >AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase protein. Length = 539 Score = 21.0 bits (42), Expect = 9.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 427 ADPAPRISSMRPTDTTRDHQ 486 AD P I +M DT+R+H+ Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464 >AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase protein. Length = 539 Score = 21.0 bits (42), Expect = 9.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 427 ADPAPRISSMRPTDTTRDHQ 486 AD P I +M DT+R+H+ Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464 >AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase protein. Length = 539 Score = 21.0 bits (42), Expect = 9.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 427 ADPAPRISSMRPTDTTRDHQ 486 AD P I +M DT+R+H+ Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 142,314 Number of Sequences: 336 Number of extensions: 2789 Number of successful extensions: 18 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 17073220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -