BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0214 (660 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 26 0.37 AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.6 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 4.5 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.0 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.9 >X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor protein. Length = 168 Score = 25.8 bits (54), Expect = 0.37 Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 1/74 (1%) Frame = +3 Query: 432 PRPAHLKHAPNGH-DARPSNRAMTKYHGPNASXXRPLXXRSPXVKFHLNRPGQIPEQXTC 608 PRP H + +A P N + P P R P + NRP IP+ Sbjct: 81 PRPPHPRLRREAESEAEPGNNRPV--YIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138 Query: 609 LPGPXXXXPWEPGN 650 P EPGN Sbjct: 139 HPRLRREPEAEPGN 152 >AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter Am-EAAT protein. Length = 543 Score = 23.0 bits (47), Expect = 2.6 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -1 Query: 585 DPVGSGETXPRAIVXXVVXTXKRSVRGI 502 DP GSG RA++ V T ++ GI Sbjct: 127 DPKGSGRMGYRALLYYTVTTILAAIVGI 154 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 22.2 bits (45), Expect = 4.5 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = +1 Query: 412 TPPRSADPAPRISSMRPTDTTRD 480 TPP+ A P P SS P D Sbjct: 337 TPPKPAPPPPPPSSSGPDSAKLD 359 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.8 bits (44), Expect = 6.0 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 Query: 504 YHGPNASXXRPLXXRSPXV 560 Y GP+AS RP+ R V Sbjct: 1354 YRGPSASGGRPVPERPERV 1372 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 21.4 bits (43), Expect = 7.9 Identities = 8/20 (40%), Positives = 10/20 (50%) Frame = +1 Query: 382 PVRTRHSSPATPPRSADPAP 441 P + H SP P R + P P Sbjct: 23 PQPSPHQSPQAPQRGSPPNP 42 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 174,948 Number of Sequences: 438 Number of extensions: 3763 Number of successful extensions: 17 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 19855845 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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