Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10e03
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   155   2e-40
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   154   6e-40
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   130   8e-33
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   129   2e-32
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.2  

>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152



 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 198

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 274

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304



 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 350

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380



 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 502

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532



 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 578

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608



 Score =  155 bits (376), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 81/90 (90%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 654

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684



 Score =  154 bits (373), Expect = 6e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 72  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 252 IQKESTLHLVLRLRGG 299
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  153 bits (370), Expect = 1e-39
 Identities = 77/90 (85%), Positives = 80/90 (88%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFA 426

Query: 210 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  154 bits (373), Expect = 6e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 72  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 252 IQKESTLHLVLRLRGG 299
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  130 bits (314), Expect = 8e-33
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = +3

Query: 72  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 251
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 252 IQKE 263
           IQKE
Sbjct: 61  IQKE 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  129 bits (311), Expect = 2e-32
 Identities = 65/78 (83%), Positives = 68/78 (87%)
 Frame = +3

Query: 30  KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 209
           K+S +  V+     MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFA
Sbjct: 35  KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFA 94

Query: 210 GKQLEDGRTLSDYNIQKE 263
           GKQLEDGRTLSDYNIQKE
Sbjct: 95  GKQLEDGRTLSDYNIQKE 112



 Score =  102 bits (245), Expect = 2e-24
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +3

Query: 156 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 1   EIHSRSN*EVKSHKFYVWFILATQCKYSSKPLRGR 105
           +IH ++N     H FY W  +A    + +  LR R
Sbjct: 196 QIHQQTN-----HTFYPWMAIADSMTFGANGLRRR 225


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -1

Query: 226  SSNCF-PAKMRRCWS 185
            S+ CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 185 RPTTSHLCRETIRRWPHSFRL*HPERIHT 271
           +P    +C+   R++  S+ L   ER HT
Sbjct: 75  KPKRQFICKYCNRQFTKSYNLLIHERTHT 103


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 203 DETLLVWRNTFLVLDFSF 150
           D  ++  R +FLV DF F
Sbjct: 479 DAAMMALRTSFLVNDFGF 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,502
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)