Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10f04
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 100 2e-21
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 82 3e-16
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 79 2e-15
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 75 4e-14
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 62 2e-10
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 59 2e-09
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 56 2e-08
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 52 3e-07
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 46 2e-05
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 42 4e-04
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 40 0.001
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 40 0.002
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 38 0.007
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 34 0.067
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_48315| Best HMM Match : GASA (HMM E-Value=1.8) 31 0.82
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 99.5 bits (237), Expect = 2e-21
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 14/134 (10%)
Frame = +2
Query: 176 KIKMSTPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 352
K+ +S+ A R L + K+L E+P G + P ++N W+ IFGP T + G FK
Sbjct: 1119 KLDLSS-AVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAH 1177
Query: 353 IEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------XNRWSPTYDVS 493
+ F +YP PPT RF++KM+HPN+Y G +C+ IL RW+PT +V
Sbjct: 1178 MSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVR 1237
Query: 494 AILTSIQSLLSDPN 535
IL S+ SLL++PN
Sbjct: 1238 TILLSVISLLNEPN 1251
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 85.8 bits (203), Expect = 2e-17
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 14/116 (12%)
Frame = +2
Query: 230 LQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 406
LQ+ P G S G D ++ W ++ GP T +E+G FK ++ F +EYP +PPT+ F+S
Sbjct: 344 LQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFIS 403
Query: 407 KMFHPNVYADGGICLDIL-------------XNRWSPTYDVSAILTSIQSLLSDPN 535
++HPNV+ +G +C+ IL RW P + V I+ S+ S+L++PN
Sbjct: 404 DIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPN 459
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +2
Query: 302 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL----XNR 469
+ G TP+ G FKL I+ E YP +PP VRFV+ ++HPN+ + G ICLD L
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 470 WSPTYDVSAILTSIQSLLSDPNP 538
W P ++S++L++I L+++PNP
Sbjct: 62 WKPALNISSVLSTILILMAEPNP 84
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/119 (36%), Positives = 60/119 (50%)
Frame = +2
Query: 182 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
K + A +R+ R+ + DPP S P +++ W + I GP + +E G F L I F
Sbjct: 91 KNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHF 150
Query: 362 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNP 538
+YP KPP G +CLDIL + WSP +S +L SI SLL+D NP
Sbjct: 151 PSDYPFKPPK---------------GMVCLDILKDSWSPALTISKVLLSICSLLTDCNP 194
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +2
Query: 272 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 451
++NI+ W +I P P+ G F++ I F EYP KPP + F +K++HPN+ G +CL
Sbjct: 20 ESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCL 78
Query: 452 DIL-XNRWSPTYDVSAILTSIQSLLSDPNPK 541
I+ W P ++ ++ +L+ DP P+
Sbjct: 79 PIISPENWKPATKTEQVIQALLALVHDPEPE 109
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = +2
Query: 206 RLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 385
R+ R+ + L EDPP G S P D N + TPFE P
Sbjct: 6 RMKRELRLLAEDPPHGASCWPVDEN-----RIDKLEASTPFE-----------------P 43
Query: 386 PTVRFVSKMFHPNVYADGGICLDIL----XNRWSPTYDVSAILTSIQSLLSDPNP 538
P VRFV+ ++HPN+ + G ICLD L W P ++S++L++I L+++PNP
Sbjct: 44 PKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNP 98
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 311 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILXNRWSPTYD 487
P D + G FK +++ TE+YPN PP R V+ ++HPN+ DG +CL +L + W+ + D
Sbjct: 45 PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLDD-WNESND 102
Query: 488 VSAILTSIQSLLSDPN 535
+ ++ + L +PN
Sbjct: 103 LEDLVQGLLFLFYNPN 118
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 182 KMSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 361
K + A +R+ R+ + DPP S P +++ W + I GP + +E G F L I F
Sbjct: 131 KNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHF 190
Query: 362 TEEYPNKPP 388
+YP KPP
Sbjct: 191 PSDYPFKPP 199
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +2
Query: 185 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 364
+ +PA +RLMR+ K L+ P ++N+ W+ + GP DT F G + I
Sbjct: 7 LRSPAVKRLMREAKELRNATEL-YHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILP 65
Query: 365 EEYPNKPPTVRFVSKMFHPNVYADGG--ICLDILXNR---WSPTYDVSAILTSI 511
EYP KPP++ ++ PN + G ICL + + W P++ + +L +I
Sbjct: 66 PEYPMKPPSIMLLT----PNGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAI 115
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 54.4 bits (125), Expect = 6e-08
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Frame = +2
Query: 266 PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVY 430
P ++I +A+I GP DTP+E G F I +YP +PP V+ ++ F+PN+Y
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLY 64
Query: 431 ADGGICL----DILXNRWSPTYDVSAILTSIQSLLSDPN 535
+G +CL D++ + YD + + +S L+ N
Sbjct: 65 RNGKVCLSIIGDVMEKSFPEFYDYYISVITEKSYLNGQN 103
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Frame = +2
Query: 311 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDV 490
P D + G FK ++ T +YPN P++ +K++HPN+ G+C+ +L + W + D+
Sbjct: 45 PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLLDD-WQASNDL 102
Query: 491 SAILTSIQSLLSDPN 535
++ + L +PN
Sbjct: 103 EDLVQGLLFLFYNPN 117
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 398 FVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSIQSLLSDPNPK 541
F++K+FHPNV +G IC++ L W P + +L +++ LL PNP+
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPE 194
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 287 IWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK---MFHPNVYADGGICL 451
I+ +I GP TP++ G F I YP+ PP+ ++S +PN+Y DG +C+
Sbjct: 635 IFRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI 692
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 44.0 bits (99), Expect = 8e-05
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Frame = +2
Query: 203 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNA---VIFGP---HDTPFEDGT--FKLTIE 358
+RLM++F+ + S D+N+ WN I G + E G+ L I
Sbjct: 737 KRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796
Query: 359 FTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILXNR-WSPTYDVSAIL 502
F E +P PP +R ++ DGG IC+++L + WS Y V A++
Sbjct: 797 FPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKGWSSAYTVEAVV 846
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 257 SGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 394
S P + + W + I GP + +E G F L I F +YP KPP V
Sbjct: 43 SAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 272 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 406
+N + A++ GP DTP+ G F I F YPN PP V+ ++
Sbjct: 2 ENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 347 LTIEFTEEYPNKPPTVRFVSKMFHPN-VYADGGICLDILXNR-WSPTYDVSAILTSIQSL 520
L + FT+++P PP VR + V + G IC+++L + WS Y + A++ I +
Sbjct: 575 LNMTFTDKFPFDPPFVRVCYPVIQAGYVLSGGAICMELLTPQGWSSAYTIEAVIVQISAT 634
Query: 521 L 523
L
Sbjct: 635 L 635
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 239 DPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPP 388
D +G+ D I GP +TPFE GT+ L I E YP PP
Sbjct: 672 DQKSGIKVELVDETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 275 NNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 406
+N+ W+ + GP DT F G + I EYP KPP++ ++
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 305 FGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 394
FGP TP+E G +K+ ++ E+YP K P++
Sbjct: 55 FGPVGTPYEGGVWKVRVDLPEKYPFKSPSI 84
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 320 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 439
T FE+ + L I YP KPPTV+FVSK+ V + G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 320 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 439
T FE+ + L I YP KPPTV+FVSK+ V + G
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKG 40
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 34.3 bits (75), Expect = 0.067
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 467 RWSPTYDVSAILTSIQSLLSDPNP 538
+WSP + +L SIQ+LLS PNP
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNP 25
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 31.5 bits (68), Expect = 0.47
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 341 FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADG 439
F+ E +P+ P V+F S +FHP ++ +G
Sbjct: 108 FREQFILAEYFPDSRPLVKFTSNVFHPQIHENG 140
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.1 bits (67), Expect = 0.62
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 248 TGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY-PNKP 385
T SGA TD I FG TPFE+G L ++F +++ P P
Sbjct: 1420 TNPSGAHTDTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSP 1466
>SB_48315| Best HMM Match : GASA (HMM E-Value=1.8)
Length = 340
Score = 30.7 bits (66), Expect = 0.82
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +3
Query: 249 QVCQELQLITIL*SGML*YLALMILHLKMEHSNSQ*NLQKNIQINPQQYDLYQKCFIQMF 428
+V +L++I + +L L +IL L + + ++ LQK Q+N Q+Y + +C I+
Sbjct: 251 KVVSKLKIIVTI--ALLLILITIILILAVVLAQTKAKLQKGNQMNQQKYPVKLRCVIRAT 308
Query: 429 TP 434
TP
Sbjct: 309 TP 310
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 347 LTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILXNRWSPTYDVSAILTSI 511
+T+ TE+ +KP T RF++K+ ++ A L I +RW P +A L+S+
Sbjct: 535 MTVMSTEQMLSKPLTKRFLAKVIKASLAATTAAQLYIKASRW-PGRSSAAPLSSL 588
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,137,129
Number of Sequences: 59808
Number of extensions: 380498
Number of successful extensions: 2515
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2506
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -